Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786393

Identifier: 91786393

GI number: 91786393

Start: 499053

End: 500792

Strand: Direct

Name: 91786393

Synonym: Bpro_0483

Alternate gene names: NA

Gene position: 499053-500792 (Clockwise)

Preceding gene: 91786392

Following gene: 91786394

Centisome position: 9.6

GC content: 60.69

Gene sequence:

>1740_bases
ATGAAGATGCGTAACACACGTCGGACGGCACTGGCACTGGCCGCTGCCTGCGCAATGGCCGGGCCCGGCTGGGCAGACGA
AGCCGCCGCCAGAAAATGGATTGACGCTGAGTTTCAGCCATCCACCCTGAGCAAAGACAAGCAACAGGCGGAGATGAAGT
GGTTTATTGATGCCGCCAAAAAGCTGCAGGCCAAGGGCGTCAAGGAAATCTCGGTGGTGTCGGAAACCATCACCACGCAC
GAATACGAATCGAAGACGCTGGCCAAGGCCTTCGAGGAAATCACCGGCATCAAGGTCAAGCACGACCTGATCCAGGAGGG
TGATGTGGTCGAGAAGCTGCAGACCTCGATGCAGTCGGGCAAGTCGATTTATGACGGCTGGGTTTCCGACTCCGACCTGA
TCGGTACCCACTACCGCTACGGCAAGATCATGAACCTGACCGACTACATGGCCGGCAAGGGCAAGGACTATACCAACCCT
GGGCTGGACCTGAAGGACTTCATCGGCACCAAGTTCACGACGGGTCCTGACGGCAAGCTTTACCAGTTGCCCGACCAACA
ATTCGCCAACCTCTACTGGTTCCGCGCCGACCTGTTTGCGCGTCAGGACCTGAAAGACAAGTTCAAGGCCAAGTATGGCT
ACGACCTGGGCGTGCCGCTCAACTGGAGCGCTTACGAAGACATCGCCGAGTTCTTCAGCGTGGACGTGAAAACCATCGAC
GGCAAACCCATCTATGGCCACATGGACTACGGCAAGAAAGACCCGTCGCTGGGCTGGCGCTTCACCGACGCCTGGCTCTC
GATGGCCGGGACTGCCGACATCGGCGCGCCCAACGGCTTGCCGGTTGATGAGTGGGGCATCCGCGTGGCAGCAGACAAAT
GCACACCGGTCGGCGCTTCGGTTTCACGCGGTGGTGCCACCAATTCGCCCGCAGCCGTTTATGCGCTCACCAAGTACGTC
GACTGGATGAAGAAGTACGCGCCCAAGGAGGCCACCGGCATGACCTTCGGCGAAGCCGGGCCGGTGCCGGCGCAGGGCCA
GATTGCCCAGCAGATCTTCTGGTACACCGCCTTCACGGCCGACATGACCAAGCCGGGCCTGCCGGTGGTGAATGCCGACG
GCACGCCGAAATGGCGCATGGCACCCGGCCCGAACGGTCCGTACTGGAAGCAGGGCATGCAGAACGGCTACCAGGACGTC
GGCTCGTGGACCTTCTTCACCAACCACGACGCGGACCGCACCGCCGCGGCCTGGCTGTACGCGCAGTTCATCACCTCGAA
GACCACGTCGTTGAAGAAGACGATCGTGGGCCTGACGCCGATCCGCGAGTCCGACATCCAGAGCAAGGCCATGACCGACA
TGGCGCCCAAGCTGGGCGGCCTGGTCGAGTTCTACCGCAGCCCGGCACGCGTGGCCTGGTCGCCCACCGGCACCAACGTG
CCCGACTACCCCAAGCTCGCGCAGCTCTGGTGGAAGAACGTGGCCGAAGCCGTGACCGGTGAAAAGACACCACAAAAAGC
CATGGACAACCTGGCCGAAGAAATGGACAACGTGATGGGTCGTTTGCAGCGTGCCGGCATGGCCAACTGTGCGCCCAAGC
TCAATCCTAAAGGTGATCCGGCCAAATACCTGAGTGACAAGGCGGCACCGTGGGCCAAGCTGGCTAACGAGAAGCCAAAA
GGTGAAACCATCAACTATGACAAGTTGCTGCAAGCCTGGAAAGACGGAAAAGCGCGTTAA

Upstream 100 bases:

>100_bases
GTAGCGCTTCGGCGGCTAGAAAAAGGAATCCGGCTCATGTTTCCCCGGAGCCGAACAAGCCTTCATCAACGGGGAGTGAA
CCAATGAGGAGACAAGAGTC

Downstream 100 bases:

>100_bases
TCCGAAGGGCTTGGGGCGTCGATTTGCAGCCGACGATTCCCAAGTCCGACAGGCTCCCCCGGGTGTGGGGCACCCCGAGG
CCCGGTTGCTGCTCGATGCA

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transporter; Twin-Arginine Translocation Pathway Signal; Abc-Type Sugar Transport System Periplasmic Component

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MKMRNTRRTALALAAACAMAGPGWADEAAARKWIDAEFQPSTLSKDKQQAEMKWFIDAAKKLQAKGVKEISVVSETITTH
EYESKTLAKAFEEITGIKVKHDLIQEGDVVEKLQTSMQSGKSIYDGWVSDSDLIGTHYRYGKIMNLTDYMAGKGKDYTNP
GLDLKDFIGTKFTTGPDGKLYQLPDQQFANLYWFRADLFARQDLKDKFKAKYGYDLGVPLNWSAYEDIAEFFSVDVKTID
GKPIYGHMDYGKKDPSLGWRFTDAWLSMAGTADIGAPNGLPVDEWGIRVAADKCTPVGASVSRGGATNSPAAVYALTKYV
DWMKKYAPKEATGMTFGEAGPVPAQGQIAQQIFWYTAFTADMTKPGLPVVNADGTPKWRMAPGPNGPYWKQGMQNGYQDV
GSWTFFTNHDADRTAAAWLYAQFITSKTTSLKKTIVGLTPIRESDIQSKAMTDMAPKLGGLVEFYRSPARVAWSPTGTNV
PDYPKLAQLWWKNVAEAVTGEKTPQKAMDNLAEEMDNVMGRLQRAGMANCAPKLNPKGDPAKYLSDKAAPWAKLANEKPK
GETINYDKLLQAWKDGKAR

Sequences:

>Translated_579_residues
MKMRNTRRTALALAAACAMAGPGWADEAAARKWIDAEFQPSTLSKDKQQAEMKWFIDAAKKLQAKGVKEISVVSETITTH
EYESKTLAKAFEEITGIKVKHDLIQEGDVVEKLQTSMQSGKSIYDGWVSDSDLIGTHYRYGKIMNLTDYMAGKGKDYTNP
GLDLKDFIGTKFTTGPDGKLYQLPDQQFANLYWFRADLFARQDLKDKFKAKYGYDLGVPLNWSAYEDIAEFFSVDVKTID
GKPIYGHMDYGKKDPSLGWRFTDAWLSMAGTADIGAPNGLPVDEWGIRVAADKCTPVGASVSRGGATNSPAAVYALTKYV
DWMKKYAPKEATGMTFGEAGPVPAQGQIAQQIFWYTAFTADMTKPGLPVVNADGTPKWRMAPGPNGPYWKQGMQNGYQDV
GSWTFFTNHDADRTAAAWLYAQFITSKTTSLKKTIVGLTPIRESDIQSKAMTDMAPKLGGLVEFYRSPARVAWSPTGTNV
PDYPKLAQLWWKNVAEAVTGEKTPQKAMDNLAEEMDNVMGRLQRAGMANCAPKLNPKGDPAKYLSDKAAPWAKLANEKPK
GETINYDKLLQAWKDGKAR
>Mature_579_residues
MKMRNTRRTALALAAACAMAGPGWADEAAARKWIDAEFQPSTLSKDKQQAEMKWFIDAAKKLQAKGVKEISVVSETITTH
EYESKTLAKAFEEITGIKVKHDLIQEGDVVEKLQTSMQSGKSIYDGWVSDSDLIGTHYRYGKIMNLTDYMAGKGKDYTNP
GLDLKDFIGTKFTTGPDGKLYQLPDQQFANLYWFRADLFARQDLKDKFKAKYGYDLGVPLNWSAYEDIAEFFSVDVKTID
GKPIYGHMDYGKKDPSLGWRFTDAWLSMAGTADIGAPNGLPVDEWGIRVAADKCTPVGASVSRGGATNSPAAVYALTKYV
DWMKKYAPKEATGMTFGEAGPVPAQGQIAQQIFWYTAFTADMTKPGLPVVNADGTPKWRMAPGPNGPYWKQGMQNGYQDV
GSWTFFTNHDADRTAAAWLYAQFITSKTTSLKKTIVGLTPIRESDIQSKAMTDMAPKLGGLVEFYRSPARVAWSPTGTNV
PDYPKLAQLWWKNVAEAVTGEKTPQKAMDNLAEEMDNVMGRLQRAGMANCAPKLNPKGDPAKYLSDKAAPWAKLANEKPK
GETINYDKLLQAWKDGKAR

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64047; Mature: 64047

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA