| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786381
Identifier: 91786381
GI number: 91786381
Start: 487755
End: 488090
Strand: Direct
Name: 91786381
Synonym: Bpro_0471
Alternate gene names: NA
Gene position: 487755-488090 (Clockwise)
Preceding gene: 91786380
Following gene: 91786382
Centisome position: 9.38
GC content: 53.27
Gene sequence:
>336_bases ATGGCAAATAAAAAACCAACTGAAAAGAACCGCGTTCTGGACGAGATGATGGAGATGGCGCAGGCCCTGCAAGGGCACGA ACTTATCTCCAAACAAGACATGGCCAAAATGAAACTCATCTGCCAGAGTCCGCCCGAATACACCGCCGAAAAGGTCACGG CCATTCGAGTGGGAAGGGCAAAGGTCAGCCAATCGGTGCTGGCGTCCATCTTGAACGTGAGCGTTTCAGCCGTTCAAAAG TGGGAGTCACCCAGTTCAGGCAAGCACCCCAGTGGCGCTGCGGCCAAACTGCTTCAGCTCATTGACAAAAAGGGCCTGGA GTCCATTCTTGCTTGA
Upstream 100 bases:
>100_bases GAAGTGGATGCCACGAAAATCATCGCGTCTAGACTGCAGGCTGCAGACGCTCAAAAACTCGATGAACTGCTTGCGGCTGA AATCCTGAAGGAGATTTGTA
Downstream 100 bases:
>100_bases AGCGGGGCGCGCCGCGCTCAACGCAAACCCGGTCCCGCTTCCCCCAAGCAAAAAGCAGACAATAAGCCCATGACGCTGAC CGAACTCAAATACATCGTCG
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MANKKPTEKNRVLDEMMEMAQALQGHELISKQDMAKMKLICQSPPEYTAEKVTAIRVGRAKVSQSVLASILNVSVSAVQK WESPSSGKHPSGAAAKLLQLIDKKGLESILA
Sequences:
>Translated_111_residues MANKKPTEKNRVLDEMMEMAQALQGHELISKQDMAKMKLICQSPPEYTAEKVTAIRVGRAKVSQSVLASILNVSVSAVQK WESPSSGKHPSGAAAKLLQLIDKKGLESILA >Mature_110_residues ANKKPTEKNRVLDEMMEMAQALQGHELISKQDMAKMKLICQSPPEYTAEKVTAIRVGRAKVSQSVLASILNVSVSAVQKW ESPSSGKHPSGAAAKLLQLIDKKGLESILA
Specific function: Unknown
COG id: COG2944
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12044; Mature: 11913
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKKPTEKNRVLDEMMEMAQALQGHELISKQDMAKMKLICQSPPEYTAEKVTAIRVGRA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KVSQSVLASILNVSVSAVQKWESPSSGKHPSGAAAKLLQLIDKKGLESILA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ANKKPTEKNRVLDEMMEMAQALQGHELISKQDMAKMKLICQSPPEYTAEKVTAIRVGRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KVSQSVLASILNVSVSAVQKWESPSSGKHPSGAAAKLLQLIDKKGLESILA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA