Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786364

Identifier: 91786364

GI number: 91786364

Start: 469686

End: 470417

Strand: Reverse

Name: 91786364

Synonym: Bpro_0454

Alternate gene names: NA

Gene position: 470417-469686 (Counterclockwise)

Preceding gene: 91786365

Following gene: 91786363

Centisome position: 9.05

GC content: 62.98

Gene sequence:

>732_bases
ATGAGCACAAGCGCCGACCTGGTCACAGTCCTGAAGAAGGAACTCAAGGCCGCCCAGATGACCTATGCCGATCTGGCCCG
CGCCCTCGGCATGGCCGAGTCCAGCGTCAAGCGCATGCTGGCCAAGGGCGACATGCCGCTGTCGCGCATCGATGCCATTT
GCCGCGCCCTGAAACTGGACTTTTCCGAACTGGCCAGGCGCGTCGCGGATACCCAGCCGCTGCTGGCGGAACTCACGGAA
GTGCAGGAAAAGGCGGTGGTGGCCGACAAGAAGCTTTTGCTGGCGGCGATTTGCGTGCTGTCACAGTGGACGCTGGAGCA
GATGACGGACAGCTACCGCCTGTCGGAGGCCGAGTGCATCAAGTATCTGGCGCAGCTGGACCGCATCGGCATCATCGAAC
TCAAGCCGATGAACCGCTACCGGCTCAAACTCGCCAAGACCTTCCGCTGGCGGCCGCACGGCCCGGTGATGGATTACTTC
CGCGACAACGCCTTGCTCGATTACTTTTCAGGCGGCTTCGATGGCGCCGGTGAAGGCCTGTTGCTGGTGCACGGCTCCAT
CAGCCGCAGCCTGGCACCCTCGTTTCTGGAACGCATGCAGCGCGTGGCGCAAGACTTTGCCCAGCAACACCAGGCCGACC
AGAAACTGGCCGACAAGGACCGCGAGGGCTACACCTTGCTGCTGGCCATGCGGAGCTGGGAATTTGAGGCGTTTGCGGCG
CTGCGGCGTTGA

Upstream 100 bases:

>100_bases
CACAAGCTGAAAATCTTTCCAGGTATCGATACAAACTGAATTTCTACGACCAGAAGTATCGATAATCAATACCAGAGAGT
TTTCCCAAGGAGCTTTTCCA

Downstream 100 bases:

>100_bases
GGCGCTGAGTTGCCGGGCCATGGGTGCCGGCTGGGCCATGTCGCTGCCGGCGTTGACCACGTCCATGCCGACGATGACCT
GGCCTTCGCACTCGGTGGCG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain Protein; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Protein Containing HTH Domain; Transcriptional Regulator XRE Family; HTH Domain-Containing Protein; XRE Family Transcription Regulator Protein

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSTSADLVTVLKKELKAAQMTYADLARALGMAESSVKRMLAKGDMPLSRIDAICRALKLDFSELARRVADTQPLLAELTE
VQEKAVVADKKLLLAAICVLSQWTLEQMTDSYRLSEAECIKYLAQLDRIGIIELKPMNRYRLKLAKTFRWRPHGPVMDYF
RDNALLDYFSGGFDGAGEGLLLVHGSISRSLAPSFLERMQRVAQDFAQQHQADQKLADKDREGYTLLLAMRSWEFEAFAA
LRR

Sequences:

>Translated_243_residues
MSTSADLVTVLKKELKAAQMTYADLARALGMAESSVKRMLAKGDMPLSRIDAICRALKLDFSELARRVADTQPLLAELTE
VQEKAVVADKKLLLAAICVLSQWTLEQMTDSYRLSEAECIKYLAQLDRIGIIELKPMNRYRLKLAKTFRWRPHGPVMDYF
RDNALLDYFSGGFDGAGEGLLLVHGSISRSLAPSFLERMQRVAQDFAQQHQADQKLADKDREGYTLLLAMRSWEFEAFAA
LRR
>Mature_242_residues
STSADLVTVLKKELKAAQMTYADLARALGMAESSVKRMLAKGDMPLSRIDAICRALKLDFSELARRVADTQPLLAELTEV
QEKAVVADKKLLLAAICVLSQWTLEQMTDSYRLSEAECIKYLAQLDRIGIIELKPMNRYRLKLAKTFRWRPHGPVMDYFR
DNALLDYFSGGFDGAGEGLLLVHGSISRSLAPSFLERMQRVAQDFAQQHQADQKLADKDREGYTLLLAMRSWEFEAFAAL
RR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27481; Mature: 27350

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSADLVTVLKKELKAAQMTYADLARALGMAESSVKRMLAKGDMPLSRIDAICRALKLD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
FSELARRVADTQPLLAELTEVQEKAVVADKKLLLAAICVLSQWTLEQMTDSYRLSEAECI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
KYLAQLDRIGIIELKPMNRYRLKLAKTFRWRPHGPVMDYFRDNALLDYFSGGFDGAGEGL
HHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHCCCCCCCCCCE
LLVHGSISRSLAPSFLERMQRVAQDFAQQHQADQKLADKDREGYTLLLAMRSWEFEAFAA
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH
LRR
HCC
>Mature Secondary Structure 
STSADLVTVLKKELKAAQMTYADLARALGMAESSVKRMLAKGDMPLSRIDAICRALKLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
FSELARRVADTQPLLAELTEVQEKAVVADKKLLLAAICVLSQWTLEQMTDSYRLSEAECI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
KYLAQLDRIGIIELKPMNRYRLKLAKTFRWRPHGPVMDYFRDNALLDYFSGGFDGAGEGL
HHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHCCCCCCCCCCE
LLVHGSISRSLAPSFLERMQRVAQDFAQQHQADQKLADKDREGYTLLLAMRSWEFEAFAA
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH
LRR
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA