Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yhjN [H]

Identifier: 91786352

GI number: 91786352

Start: 459890

End: 461017

Strand: Direct

Name: yhjN [H]

Synonym: Bpro_0442

Alternate gene names: 91786352

Gene position: 459890-461017 (Clockwise)

Preceding gene: 91786350

Following gene: 91786356

Centisome position: 8.84

GC content: 65.51

Gene sequence:

>1128_bases
ATGCTTCCTGACGCTGCCAAACGCCTATTGTCCTTGCTTCGATCTCCGCCGGTGTGCGTCATTGGGACGCTCCTGATCGC
CTGGGCCGCGGCCGCTCTGTGCGTCATGTTGCGCACGCCCCTGCCGTGGATGATCGGGCCCTTGCTGGTGACTGCCATCA
TCTCCATGCTGGGCGGTGCCACGGCCAGCTGGACGCCGCTGCGCGATGCCGGCCAGTGGATCATTGGCTGCGCGCTGGGG
CTTTATTTCACGCCGCAGGTGGTCGCGCTGGTGGCCGGTTTGTGGTGGGCGATTGCGCTCAATATTGTCTGGGCGCTGGC
ATTGGGATGGATCTTTGGCGCCTGGTTGCACCGTGTGCACCATGGGCCCGGGCCGCTTCATGTGTCGGGCCTGAGCCGCA
TCACCACCTACTTCGCCGCACCCATAGGCGCGGCCTCGGAAATGACCCTGATGGGCGAGAGCCACGGCGCGCAGACGGAC
TTGGTAGCGTCGGCGCACAGCCTGCGCGTGCTGCTGGTGACGCTGATCATTCCTTTCGGCTTTCAGTGGGCCGGGTTGCA
CGGGCTGGATACGACGCTCCCCGGTGTCCGGGACGTTCACTTCCCGGGGCTGGCACTGCTGGCCGGACTGACCGGCATCG
GCTGCTGGACCATGCTCAAGCTCAAGCGCACCAACCCCTGGTTCATCGGTGCGCTGGTGGTGTCGTTGCTGCTGACCGCC
TGCGGTTTCACGCTGTCAGCGCTTCCGCAGTGGATGACCAATGCCGCACAACTCGTGATCGGCATCAGCCTGGGCGTGCG
CTTTACCCGCAGTTTTGTGCATCTGGCGCCGCGCTGGCTCGGTTCTGTGGCGCTGGCGACTGTCGGGATGATGGGCTTGT
GCGCCGGCTTTGCGTGGATGCTGGCCCGGTTCAGCAACCTGCATTGGGCCACGCTGCTGCTGGGGACTTCGCCGGGCGGC
ATTGCCGAGATGGCTATCACCGCCAAGGTGCTGCAACTCGGCGTGCCGGTGGTGACGGCGTTTCACGTCACGCGGCTGGC
GGCGGTGCTATTGCTGGCCGAGCCGATGTACCGCTGGATGTACCAGAAGCGACCGGCGGCGCAGGCTGAAAGCCCACCCG
CTGAATGA

Upstream 100 bases:

>100_bases
CAAGGCTAGCAAAGGGACATGAAGCATCGGTGGATACTAATGCCTTCGGCCCGGCTCCGCCCGGCATGCTTCCAACTTGT
CATTTTCCGCTTACACGTCC

Downstream 100 bases:

>100_bases
GAAGAAAAGGGGACAGAGGGCGACCCTGAGGGCTCCTCAATCCAGCAGGGGCCGCGGAACCGGCTTCGCCGGGCCGCAGG
CGCAGCGGCCCCCTCGGGGG

Product: putative ammonia monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MLPDAAKRLLSLLRSPPVCVIGTLLIAWAAAALCVMLRTPLPWMIGPLLVTAIISMLGGATASWTPLRDAGQWIIGCALG
LYFTPQVVALVAGLWWAIALNIVWALALGWIFGAWLHRVHHGPGPLHVSGLSRITTYFAAPIGAASEMTLMGESHGAQTD
LVASAHSLRVLLVTLIIPFGFQWAGLHGLDTTLPGVRDVHFPGLALLAGLTGIGCWTMLKLKRTNPWFIGALVVSLLLTA
CGFTLSALPQWMTNAAQLVIGISLGVRFTRSFVHLAPRWLGSVALATVGMMGLCAGFAWMLARFSNLHWATLLLGTSPGG
IAEMAITAKVLQLGVPVVTAFHVTRLAAVLLLAEPMYRWMYQKRPAAQAESPPAE

Sequences:

>Translated_375_residues
MLPDAAKRLLSLLRSPPVCVIGTLLIAWAAAALCVMLRTPLPWMIGPLLVTAIISMLGGATASWTPLRDAGQWIIGCALG
LYFTPQVVALVAGLWWAIALNIVWALALGWIFGAWLHRVHHGPGPLHVSGLSRITTYFAAPIGAASEMTLMGESHGAQTD
LVASAHSLRVLLVTLIIPFGFQWAGLHGLDTTLPGVRDVHFPGLALLAGLTGIGCWTMLKLKRTNPWFIGALVVSLLLTA
CGFTLSALPQWMTNAAQLVIGISLGVRFTRSFVHLAPRWLGSVALATVGMMGLCAGFAWMLARFSNLHWATLLLGTSPGG
IAEMAITAKVLQLGVPVVTAFHVTRLAAVLLLAEPMYRWMYQKRPAAQAESPPAE
>Mature_375_residues
MLPDAAKRLLSLLRSPPVCVIGTLLIAWAAAALCVMLRTPLPWMIGPLLVTAIISMLGGATASWTPLRDAGQWIIGCALG
LYFTPQVVALVAGLWWAIALNIVWALALGWIFGAWLHRVHHGPGPLHVSGLSRITTYFAAPIGAASEMTLMGESHGAQTD
LVASAHSLRVLLVTLIIPFGFQWAGLHGLDTTLPGVRDVHFPGLALLAGLTGIGCWTMLKLKRTNPWFIGALVVSLLLTA
CGFTLSALPQWMTNAAQLVIGISLGVRFTRSFVHLAPRWLGSVALATVGMMGLCAGFAWMLARFSNLHWATLLLGTSPGG
IAEMAITAKVLQLGVPVVTAFHVTRLAAVLLLAEPMYRWMYQKRPAAQAESPPAE

Specific function: Seems To Be Involved In The Regulation Of Aidb. [C]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=342, Percent_Identity=27.4853801169591, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 40048; Mature: 40048

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDAAKRLLSLLRSPPVCVIGTLLIAWAAAALCVMLRTPLPWMIGPLLVTAIISMLGGA
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
TASWTPLRDAGQWIIGCALGLYFTPQVVALVAGLWWAIALNIVWALALGWIFGAWLHRVH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGPGPLHVSGLSRITTYFAAPIGAASEMTLMGESHGAQTDLVASAHSLRVLLVTLIIPFG
CCCCCEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC
FQWAGLHGLDTTLPGVRDVHFPGLALLAGLTGIGCWTMLKLKRTNPWFIGALVVSLLLTA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH
CGFTLSALPQWMTNAAQLVIGISLGVRFTRSFVHLAPRWLGSVALATVGMMGLCAGFAWM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARFSNLHWATLLLGTSPGGIAEMAITAKVLQLGVPVVTAFHVTRLAAVLLLAEPMYRWM
HHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
YQKRPAAQAESPPAE
HHCCCCCCCCCCCCC
>Mature Secondary Structure
MLPDAAKRLLSLLRSPPVCVIGTLLIAWAAAALCVMLRTPLPWMIGPLLVTAIISMLGGA
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
TASWTPLRDAGQWIIGCALGLYFTPQVVALVAGLWWAIALNIVWALALGWIFGAWLHRVH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGPGPLHVSGLSRITTYFAAPIGAASEMTLMGESHGAQTDLVASAHSLRVLLVTLIIPFG
CCCCCEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC
FQWAGLHGLDTTLPGVRDVHFPGLALLAGLTGIGCWTMLKLKRTNPWFIGALVVSLLLTA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH
CGFTLSALPQWMTNAAQLVIGISLGVRFTRSFVHLAPRWLGSVALATVGMMGLCAGFAWM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARFSNLHWATLLLGTSPGGIAEMAITAKVLQLGVPVVTAFHVTRLAAVLLLAEPMYRWM
HHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
YQKRPAAQAESPPAE
HHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]