| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yhjN [H]
Identifier: 91786352
GI number: 91786352
Start: 459890
End: 461017
Strand: Direct
Name: yhjN [H]
Synonym: Bpro_0442
Alternate gene names: 91786352
Gene position: 459890-461017 (Clockwise)
Preceding gene: 91786350
Following gene: 91786356
Centisome position: 8.84
GC content: 65.51
Gene sequence:
>1128_bases ATGCTTCCTGACGCTGCCAAACGCCTATTGTCCTTGCTTCGATCTCCGCCGGTGTGCGTCATTGGGACGCTCCTGATCGC CTGGGCCGCGGCCGCTCTGTGCGTCATGTTGCGCACGCCCCTGCCGTGGATGATCGGGCCCTTGCTGGTGACTGCCATCA TCTCCATGCTGGGCGGTGCCACGGCCAGCTGGACGCCGCTGCGCGATGCCGGCCAGTGGATCATTGGCTGCGCGCTGGGG CTTTATTTCACGCCGCAGGTGGTCGCGCTGGTGGCCGGTTTGTGGTGGGCGATTGCGCTCAATATTGTCTGGGCGCTGGC ATTGGGATGGATCTTTGGCGCCTGGTTGCACCGTGTGCACCATGGGCCCGGGCCGCTTCATGTGTCGGGCCTGAGCCGCA TCACCACCTACTTCGCCGCACCCATAGGCGCGGCCTCGGAAATGACCCTGATGGGCGAGAGCCACGGCGCGCAGACGGAC TTGGTAGCGTCGGCGCACAGCCTGCGCGTGCTGCTGGTGACGCTGATCATTCCTTTCGGCTTTCAGTGGGCCGGGTTGCA CGGGCTGGATACGACGCTCCCCGGTGTCCGGGACGTTCACTTCCCGGGGCTGGCACTGCTGGCCGGACTGACCGGCATCG GCTGCTGGACCATGCTCAAGCTCAAGCGCACCAACCCCTGGTTCATCGGTGCGCTGGTGGTGTCGTTGCTGCTGACCGCC TGCGGTTTCACGCTGTCAGCGCTTCCGCAGTGGATGACCAATGCCGCACAACTCGTGATCGGCATCAGCCTGGGCGTGCG CTTTACCCGCAGTTTTGTGCATCTGGCGCCGCGCTGGCTCGGTTCTGTGGCGCTGGCGACTGTCGGGATGATGGGCTTGT GCGCCGGCTTTGCGTGGATGCTGGCCCGGTTCAGCAACCTGCATTGGGCCACGCTGCTGCTGGGGACTTCGCCGGGCGGC ATTGCCGAGATGGCTATCACCGCCAAGGTGCTGCAACTCGGCGTGCCGGTGGTGACGGCGTTTCACGTCACGCGGCTGGC GGCGGTGCTATTGCTGGCCGAGCCGATGTACCGCTGGATGTACCAGAAGCGACCGGCGGCGCAGGCTGAAAGCCCACCCG CTGAATGA
Upstream 100 bases:
>100_bases CAAGGCTAGCAAAGGGACATGAAGCATCGGTGGATACTAATGCCTTCGGCCCGGCTCCGCCCGGCATGCTTCCAACTTGT CATTTTCCGCTTACACGTCC
Downstream 100 bases:
>100_bases GAAGAAAAGGGGACAGAGGGCGACCCTGAGGGCTCCTCAATCCAGCAGGGGCCGCGGAACCGGCTTCGCCGGGCCGCAGG CGCAGCGGCCCCCTCGGGGG
Product: putative ammonia monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MLPDAAKRLLSLLRSPPVCVIGTLLIAWAAAALCVMLRTPLPWMIGPLLVTAIISMLGGATASWTPLRDAGQWIIGCALG LYFTPQVVALVAGLWWAIALNIVWALALGWIFGAWLHRVHHGPGPLHVSGLSRITTYFAAPIGAASEMTLMGESHGAQTD LVASAHSLRVLLVTLIIPFGFQWAGLHGLDTTLPGVRDVHFPGLALLAGLTGIGCWTMLKLKRTNPWFIGALVVSLLLTA CGFTLSALPQWMTNAAQLVIGISLGVRFTRSFVHLAPRWLGSVALATVGMMGLCAGFAWMLARFSNLHWATLLLGTSPGG IAEMAITAKVLQLGVPVVTAFHVTRLAAVLLLAEPMYRWMYQKRPAAQAESPPAE
Sequences:
>Translated_375_residues MLPDAAKRLLSLLRSPPVCVIGTLLIAWAAAALCVMLRTPLPWMIGPLLVTAIISMLGGATASWTPLRDAGQWIIGCALG LYFTPQVVALVAGLWWAIALNIVWALALGWIFGAWLHRVHHGPGPLHVSGLSRITTYFAAPIGAASEMTLMGESHGAQTD LVASAHSLRVLLVTLIIPFGFQWAGLHGLDTTLPGVRDVHFPGLALLAGLTGIGCWTMLKLKRTNPWFIGALVVSLLLTA CGFTLSALPQWMTNAAQLVIGISLGVRFTRSFVHLAPRWLGSVALATVGMMGLCAGFAWMLARFSNLHWATLLLGTSPGG IAEMAITAKVLQLGVPVVTAFHVTRLAAVLLLAEPMYRWMYQKRPAAQAESPPAE >Mature_375_residues MLPDAAKRLLSLLRSPPVCVIGTLLIAWAAAALCVMLRTPLPWMIGPLLVTAIISMLGGATASWTPLRDAGQWIIGCALG LYFTPQVVALVAGLWWAIALNIVWALALGWIFGAWLHRVHHGPGPLHVSGLSRITTYFAAPIGAASEMTLMGESHGAQTD LVASAHSLRVLLVTLIIPFGFQWAGLHGLDTTLPGVRDVHFPGLALLAGLTGIGCWTMLKLKRTNPWFIGALVVSLLLTA CGFTLSALPQWMTNAAQLVIGISLGVRFTRSFVHLAPRWLGSVALATVGMMGLCAGFAWMLARFSNLHWATLLLGTSPGG IAEMAITAKVLQLGVPVVTAFHVTRLAAVLLLAEPMYRWMYQKRPAAQAESPPAE
Specific function: Seems To Be Involved In The Regulation Of Aidb. [C]
COG id: COG3180
COG function: function code R; Putative ammonia monooxygenase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AbrB family [H]
Homologues:
Organism=Escherichia coli, GI87081776, Length=342, Percent_Identity=27.4853801169591, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017516 - InterPro: IPR007820 [H]
Pfam domain/function: PF05145 AmoA [H]
EC number: NA
Molecular weight: Translated: 40048; Mature: 40048
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPDAAKRLLSLLRSPPVCVIGTLLIAWAAAALCVMLRTPLPWMIGPLLVTAIISMLGGA CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC TASWTPLRDAGQWIIGCALGLYFTPQVVALVAGLWWAIALNIVWALALGWIFGAWLHRVH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGPGPLHVSGLSRITTYFAAPIGAASEMTLMGESHGAQTDLVASAHSLRVLLVTLIIPFG CCCCCEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC FQWAGLHGLDTTLPGVRDVHFPGLALLAGLTGIGCWTMLKLKRTNPWFIGALVVSLLLTA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH CGFTLSALPQWMTNAAQLVIGISLGVRFTRSFVHLAPRWLGSVALATVGMMGLCAGFAWM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LARFSNLHWATLLLGTSPGGIAEMAITAKVLQLGVPVVTAFHVTRLAAVLLLAEPMYRWM HHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH YQKRPAAQAESPPAE HHCCCCCCCCCCCCC >Mature Secondary Structure MLPDAAKRLLSLLRSPPVCVIGTLLIAWAAAALCVMLRTPLPWMIGPLLVTAIISMLGGA CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC TASWTPLRDAGQWIIGCALGLYFTPQVVALVAGLWWAIALNIVWALALGWIFGAWLHRVH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGPGPLHVSGLSRITTYFAAPIGAASEMTLMGESHGAQTDLVASAHSLRVLLVTLIIPFG CCCCCEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC FQWAGLHGLDTTLPGVRDVHFPGLALLAGLTGIGCWTMLKLKRTNPWFIGALVVSLLLTA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH CGFTLSALPQWMTNAAQLVIGISLGVRFTRSFVHLAPRWLGSVALATVGMMGLCAGFAWM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LARFSNLHWATLLLGTSPGGIAEMAITAKVLQLGVPVVTAFHVTRLAAVLLLAEPMYRWM HHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH YQKRPAAQAESPPAE HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]