| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786314
Identifier: 91786314
GI number: 91786314
Start: 415043
End: 416470
Strand: Direct
Name: 91786314
Synonym: Bpro_0404
Alternate gene names: NA
Gene position: 415043-416470 (Clockwise)
Preceding gene: 91786313
Following gene: 91786315
Centisome position: 7.98
GC content: 62.68
Gene sequence:
>1428_bases ATGAAAAACATGAAAAGATCTGCAATCACCCTGATGCTGCTGGCGTCGGGCACCCTCAGCCTGTCCGCCCTGGCCCAGAC CCCGAAGGATTTCGAGGAGCTGCGCCAGGAGTTCCTGCGCTTGCGGCAGGAGCTCAACCAGCTCAAGGCGCAGCCGCCCG CCGCCGCGCCGGCGGTCAGCAATGCCGCCATCGAGCGCCTTGAGCAGCTGGAGCTCAAGCAAAAGGATGCGGTGGTGCTG GGTGACATTCCCGGCAGCTTCCGGCTGCCGGGCTCGGAGACCTCGCTGCGCCTGTATGGCGTGGCCGAGCTCAATGCCGT GCATGAATTCAAGGGCGACAATTCGGCCAACGACTACTCGACGTTTGTGCCGTACGCGCCTATCAATGGGTCGACCAACC GCACCGGCCAGACCTACCTGCATGCCCGCACCTCCCGCATCGGCATTGAAGCCTCCACCCCGACCCCTCACGGTCCGCTG GCGGTGAAGGTCGAGGGCGACTTCAACAATGATCCCCGCACCGGCAACAGCGCCGTGTATGGAACGGTCGGCAACATCTA CACCCAGCAGGCGACCAACTCCTACAACTTCCGCCTGCGCCATGCCTACGGCCAGTTTGGCGGGCTGCTGGTCGGGCAGA CCTGGTCGACCTTCATGGACCTCGACAACTCGCCGGAGACCGTCGATTTCAATGGCCCGATCGGCTCGACCTTCATTCGC CAGCCGCAAGTCCGCTATGCCTATGGCACCAAAGACATGGGCACCTTCACCGTGGCCGCTGAAAATTCGGTGAGCTACGT GCTTGACAACACGGGTGTGGCGACGCCGGCCGGCTTCTCCCGGGTGCCGGACTTCATCGCGCGCTGGGACAAGAGCTTCG GCTGGGGTGCGATGAGCGTGCGCGGGCTGACCCATGAGCTGCGCGTCAACGGCGACATCGGCGGTGCCAGCGTCAATGCG TCGCGGCGCGGCTACGGCGTGGGCGCGACGGCCCTGGTCAAGATGCGTGATGCCAAGGACTTCGCCAGCTTTGCGGTGAC CTATGGCAAAGGCATCGGGCGCTACCTCAATTACATTGAAGGCGCCAGCTACGACCCGGCGACCAATGACATCCTGCTGG AAAAGGCCCTGGGTGTGGTGGTGGGCTACCAGTACAAGGCGAGCGATACCTTCCGCACCAACTTTGTGTTGGGCTGGCAG AAGAACTACGACAACGCCTACACCGCCTTTGCCCGCGCCAACGGCCTGGACACCGGGCAGTTCGGCATCAACCGCCGTGT CTACCAGGCGCACCTGGGCTTCATTTACAACCCGATCAAGAACGTGGACTTCGGCGCTGAATATGTGTTTGGCCAGCGCG AGACGCTGAGCGGCGAAAAGGGGAATATGTCGCGTGTGAACCTGTCGGCGAAGTACTACTTCAACTGA
Upstream 100 bases:
>100_bases CACTGATTTATTCGTTGGGGCGCCAGCCTGCCGACTCCCGCCGGGCGCGCGCAGCGCGCGCCCGCTGGCTGAGTTCATCC TATTTTTAACCGAAGACAAC
Downstream 100 bases:
>100_bases GAGAGTGAGAGTTTTTCGATTTCACTCCCTCTCCCTCTCCCTCTGGGAGAGGGCGGGGGTGAGGGCCGGCGAGTGGCCAC AACACTGGAGCACAGCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MKNMKRSAITLMLLASGTLSLSALAQTPKDFEELRQEFLRLRQELNQLKAQPPAAAPAVSNAAIERLEQLELKQKDAVVL GDIPGSFRLPGSETSLRLYGVAELNAVHEFKGDNSANDYSTFVPYAPINGSTNRTGQTYLHARTSRIGIEASTPTPHGPL AVKVEGDFNNDPRTGNSAVYGTVGNIYTQQATNSYNFRLRHAYGQFGGLLVGQTWSTFMDLDNSPETVDFNGPIGSTFIR QPQVRYAYGTKDMGTFTVAAENSVSYVLDNTGVATPAGFSRVPDFIARWDKSFGWGAMSVRGLTHELRVNGDIGGASVNA SRRGYGVGATALVKMRDAKDFASFAVTYGKGIGRYLNYIEGASYDPATNDILLEKALGVVVGYQYKASDTFRTNFVLGWQ KNYDNAYTAFARANGLDTGQFGINRRVYQAHLGFIYNPIKNVDFGAEYVFGQRETLSGEKGNMSRVNLSAKYYFN
Sequences:
>Translated_475_residues MKNMKRSAITLMLLASGTLSLSALAQTPKDFEELRQEFLRLRQELNQLKAQPPAAAPAVSNAAIERLEQLELKQKDAVVL GDIPGSFRLPGSETSLRLYGVAELNAVHEFKGDNSANDYSTFVPYAPINGSTNRTGQTYLHARTSRIGIEASTPTPHGPL AVKVEGDFNNDPRTGNSAVYGTVGNIYTQQATNSYNFRLRHAYGQFGGLLVGQTWSTFMDLDNSPETVDFNGPIGSTFIR QPQVRYAYGTKDMGTFTVAAENSVSYVLDNTGVATPAGFSRVPDFIARWDKSFGWGAMSVRGLTHELRVNGDIGGASVNA SRRGYGVGATALVKMRDAKDFASFAVTYGKGIGRYLNYIEGASYDPATNDILLEKALGVVVGYQYKASDTFRTNFVLGWQ KNYDNAYTAFARANGLDTGQFGINRRVYQAHLGFIYNPIKNVDFGAEYVFGQRETLSGEKGNMSRVNLSAKYYFN >Mature_475_residues MKNMKRSAITLMLLASGTLSLSALAQTPKDFEELRQEFLRLRQELNQLKAQPPAAAPAVSNAAIERLEQLELKQKDAVVL GDIPGSFRLPGSETSLRLYGVAELNAVHEFKGDNSANDYSTFVPYAPINGSTNRTGQTYLHARTSRIGIEASTPTPHGPL AVKVEGDFNNDPRTGNSAVYGTVGNIYTQQATNSYNFRLRHAYGQFGGLLVGQTWSTFMDLDNSPETVDFNGPIGSTFIR QPQVRYAYGTKDMGTFTVAAENSVSYVLDNTGVATPAGFSRVPDFIARWDKSFGWGAMSVRGLTHELRVNGDIGGASVNA SRRGYGVGATALVKMRDAKDFASFAVTYGKGIGRYLNYIEGASYDPATNDILLEKALGVVVGYQYKASDTFRTNFVLGWQ KNYDNAYTAFARANGLDTGQFGINRRVYQAHLGFIYNPIKNVDFGAEYVFGQRETLSGEKGNMSRVNLSAKYYFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52031; Mature: 52031
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNMKRSAITLMLLASGTLSLSALAQTPKDFEELRQEFLRLRQELNQLKAQPPAAAPAVS CCCCHHHHEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH NAAIERLEQLELKQKDAVVLGDIPGSFRLPGSETSLRLYGVAELNAVHEFKGDNSANDYS HHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCC TFVPYAPINGSTNRTGQTYLHARTSRIGIEASTPTPHGPLAVKVEGDFNNDPRTGNSAVY EECCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEE GTVGNIYTQQATNSYNFRLRHAYGQFGGLLVGQTWSTFMDLDNSPETVDFNGPIGSTFIR ECCCCEEECCCCCCCEEEEEECCCCCCCEEEECCHHHHHCCCCCCCEEEECCCCCCHHHC QPQVRYAYGTKDMGTFTVAAENSVSYVLDNTGVATPAGFSRVPDFIARWDKSFGWGAMSV CCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEE RGLTHELRVNGDIGGASVNASRRGYGVGATALVKMRDAKDFASFAVTYGKGIGRYLNYIE CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHC GASYDPATNDILLEKALGVVVGYQYKASDTFRTNFVLGWQKNYDNAYTAFARANGLDTGQ CCCCCCCCCHHHHHHHHCEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHCCCCCCCC FGINRRVYQAHLGFIYNPIKNVDFGAEYVFGQRETLSGEKGNMSRVNLSAKYYFN CCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCHHCCCCCCCCEEEEEEEEEEEC >Mature Secondary Structure MKNMKRSAITLMLLASGTLSLSALAQTPKDFEELRQEFLRLRQELNQLKAQPPAAAPAVS CCCCHHHHEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH NAAIERLEQLELKQKDAVVLGDIPGSFRLPGSETSLRLYGVAELNAVHEFKGDNSANDYS HHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCC TFVPYAPINGSTNRTGQTYLHARTSRIGIEASTPTPHGPLAVKVEGDFNNDPRTGNSAVY EECCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEE GTVGNIYTQQATNSYNFRLRHAYGQFGGLLVGQTWSTFMDLDNSPETVDFNGPIGSTFIR ECCCCEEECCCCCCCEEEEEECCCCCCCEEEECCHHHHHCCCCCCCEEEECCCCCCHHHC QPQVRYAYGTKDMGTFTVAAENSVSYVLDNTGVATPAGFSRVPDFIARWDKSFGWGAMSV CCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEE RGLTHELRVNGDIGGASVNASRRGYGVGATALVKMRDAKDFASFAVTYGKGIGRYLNYIE CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHC GASYDPATNDILLEKALGVVVGYQYKASDTFRTNFVLGWQKNYDNAYTAFARANGLDTGQ CCCCCCCCCHHHHHHHHCEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHCCCCCCCC FGINRRVYQAHLGFIYNPIKNVDFGAEYVFGQRETLSGEKGNMSRVNLSAKYYFN CCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCHHCCCCCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA