| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is bcr [H]
Identifier: 91786299
GI number: 91786299
Start: 402105
End: 403334
Strand: Reverse
Name: bcr [H]
Synonym: Bpro_0389
Alternate gene names: 91786299
Gene position: 403334-402105 (Counterclockwise)
Preceding gene: 91786300
Following gene: 91786297
Centisome position: 7.76
GC content: 63.33
Gene sequence:
>1230_bases ATGAACCCGAACGCCGACCAACTCTGGCGCGCGCCGCGCTGGACGCTGGCCGTCCTGCTGGCAGTCCTCGGCATGCTGGG GCCGTTTTCGATCGACACCTACATTCCGGCCTTCTCGGGCATTGCGACGGCGCTGGGCGCCTCGCCGGTCGAGATGCAGC AAACGCTGTCGGCCTACCTGTTCGGTTTTGCCTTCATGAACCTGTTTCATGGTGCGCTGGCCGACAGCTTTGGCCGGCGG CCAGTGGTGCTGTGGGGGATTGCGGTGTTCACCCTGGCGTCGGCCGGCTGCGCCTTGTCGCAGAGCATTGGCCAGCTGGT TTTTTTCAGGGCGCTGCAGGGCCTCTCCACGGGCGCCGGCATTGTGGTGTCGCGTGCCGTGATACGCGACATGTACCCGC CCGCGCAGGCTCAGCAGGTCATGAGCCAGGTCACCATCTATTTCGGAGTCGCGCCTGCAATTGCGCCCCTTATGGGCGGC TGGCTGTTTGTGCACCTCGGCTGGCACAGCATTTTCTGGTTTCTCACGGGCGTCGGCGCAACGCTCTGGGCCGCCAACTT CCGGTTTTTGCCGGAAACATTGCGCAGCGAGGAGCGCCAGCCCTTCGAAGTCAGGCACCTGATGCGCGGCTACTGGCAGC TGGGCTCCAGTCCGCGCTTTTTGCTGCTGGCGCTGGCCAGCGGCGTGCCTTTCAATGGCATGTTCCTCTATGTGCTGGCG GCCCCGGCGTTCCTCGGTCAACACCTGTCCCTGCAACCCACCGAATTTTTCTGGTTTTTCATTCTCACCATTTCCGGCAT CATGTCGGGCGCCTGGCTGAGCGGCAGGCTGGCCGGAAAAATTGCACCCAAACGGCAGATACGGCACGGCTTTGTCATCA TGCTGGTGACGTCGCTGGTCAACCTGGCCGCCAACCTGCTGTTCGCGCCGCATGTTTCCTGGGCGCTGTTCCCGATCGCC GTATTTGCCTTTGGCTGGGCACTGATGGTGCCGGTCGTCACACTGCTGGTGCTGGACCTTTATCCCGAGCGGCGCGGCAT GGCTTCCTCCCTGCAAGCCTTCATCGGTTCAACGGCCAACGGTCTGGTGGCGGGCCTGATTGCGCCGCTGGTCATGCACT CGACGCCCGCGCTGGCGACTGTTTCACTGGGCATGATGTGCATCGGGCTGGTGTCGTGGGCGTATTTGCACCATCGCTGG CCGGAAATCGGCCGTGCGGTGTCCCTATAG
Upstream 100 bases:
>100_bases TGGCCGAACTGCCGCTGAAAACCGCCGTCAAAATTGCCGCCGAGATCACCGGTGCGCCGCGCAACGAGCTGTATGACACC GCGCTCAAACTGAAGAAGGC
Downstream 100 bases:
>100_bases CCCGTACCTGCTACCCGCCGCTGCAGTGAACGGCACGGATCAGTTGTTGTCGTTCATCCTGATCGGGATTTCCATTCCCT GCGAGGTGCGCCGCACCACA
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MNPNADQLWRAPRWTLAVLLAVLGMLGPFSIDTYIPAFSGIATALGASPVEMQQTLSAYLFGFAFMNLFHGALADSFGRR PVVLWGIAVFTLASAGCALSQSIGQLVFFRALQGLSTGAGIVVSRAVIRDMYPPAQAQQVMSQVTIYFGVAPAIAPLMGG WLFVHLGWHSIFWFLTGVGATLWAANFRFLPETLRSEERQPFEVRHLMRGYWQLGSSPRFLLLALASGVPFNGMFLYVLA APAFLGQHLSLQPTEFFWFFILTISGIMSGAWLSGRLAGKIAPKRQIRHGFVIMLVTSLVNLAANLLFAPHVSWALFPIA VFAFGWALMVPVVTLLVLDLYPERRGMASSLQAFIGSTANGLVAGLIAPLVMHSTPALATVSLGMMCIGLVSWAYLHHRW PEIGRAVSL
Sequences:
>Translated_409_residues MNPNADQLWRAPRWTLAVLLAVLGMLGPFSIDTYIPAFSGIATALGASPVEMQQTLSAYLFGFAFMNLFHGALADSFGRR PVVLWGIAVFTLASAGCALSQSIGQLVFFRALQGLSTGAGIVVSRAVIRDMYPPAQAQQVMSQVTIYFGVAPAIAPLMGG WLFVHLGWHSIFWFLTGVGATLWAANFRFLPETLRSEERQPFEVRHLMRGYWQLGSSPRFLLLALASGVPFNGMFLYVLA APAFLGQHLSLQPTEFFWFFILTISGIMSGAWLSGRLAGKIAPKRQIRHGFVIMLVTSLVNLAANLLFAPHVSWALFPIA VFAFGWALMVPVVTLLVLDLYPERRGMASSLQAFIGSTANGLVAGLIAPLVMHSTPALATVSLGMMCIGLVSWAYLHHRW PEIGRAVSL >Mature_409_residues MNPNADQLWRAPRWTLAVLLAVLGMLGPFSIDTYIPAFSGIATALGASPVEMQQTLSAYLFGFAFMNLFHGALADSFGRR PVVLWGIAVFTLASAGCALSQSIGQLVFFRALQGLSTGAGIVVSRAVIRDMYPPAQAQQVMSQVTIYFGVAPAIAPLMGG WLFVHLGWHSIFWFLTGVGATLWAANFRFLPETLRSEERQPFEVRHLMRGYWQLGSSPRFLLLALASGVPFNGMFLYVLA APAFLGQHLSLQPTEFFWFFILTISGIMSGAWLSGRLAGKIAPKRQIRHGFVIMLVTSLVNLAANLLFAPHVSWALFPIA VFAFGWALMVPVVTLLVLDLYPERRGMASSLQAFIGSTANGLVAGLIAPLVMHSTPALATVSLGMMCIGLVSWAYLHHRW PEIGRAVSL
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=347, Percent_Identity=36.0230547550432, Blast_Score=171, Evalue=9e-44, Organism=Escherichia coli, GI48994889, Length=390, Percent_Identity=27.9487179487179, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI87082312, Length=355, Percent_Identity=29.0140845070423, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790146, Length=333, Percent_Identity=26.7267267267267, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1790794, Length=316, Percent_Identity=25.3164556962025, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790195, Length=149, Percent_Identity=34.8993288590604, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787065, Length=275, Percent_Identity=25.8181818181818, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI87081738, Length=180, Percent_Identity=31.6666666666667, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1788392, Length=172, Percent_Identity=33.1395348837209, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789042, Length=143, Percent_Identity=29.3706293706294, Blast_Score=66, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324264, Length=185, Percent_Identity=28.1081081081081, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322070, Length=128, Percent_Identity=33.59375, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6322071, Length=127, Percent_Identity=33.0708661417323, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44544; Mature: 44544
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPNADQLWRAPRWTLAVLLAVLGMLGPFSIDTYIPAFSGIATALGASPVEMQQTLSAYL CCCCHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH FGFAFMNLFHGALADSFGRRPVVLWGIAVFTLASAGCALSQSIGQLVFFRALQGLSTGAG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCH IVVSRAVIRDMYPPAQAQQVMSQVTIYFGVAPAIAPLMGGWLFVHLGWHSIFWFLTGVGA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLWAANFRFLPETLRSEERQPFEVRHLMRGYWQLGSSPRFLLLALASGVPFNGMFLYVLA HHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHH APAFLGQHLSLQPTEFFWFFILTISGIMSGAWLSGRLAGKIAPKRQIRHGFVIMLVTSLV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCHHHCCCCHHHHHHHHHHHHHHHHHH NLAANLLFAPHVSWALFPIAVFAFGWALMVPVVTLLVLDLYPERRGMASSLQAFIGSTAN HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHH GLVAGLIAPLVMHSTPALATVSLGMMCIGLVSWAYLHHRWPEIGRAVSL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNPNADQLWRAPRWTLAVLLAVLGMLGPFSIDTYIPAFSGIATALGASPVEMQQTLSAYL CCCCHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH FGFAFMNLFHGALADSFGRRPVVLWGIAVFTLASAGCALSQSIGQLVFFRALQGLSTGAG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCH IVVSRAVIRDMYPPAQAQQVMSQVTIYFGVAPAIAPLMGGWLFVHLGWHSIFWFLTGVGA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLWAANFRFLPETLRSEERQPFEVRHLMRGYWQLGSSPRFLLLALASGVPFNGMFLYVLA HHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHH APAFLGQHLSLQPTEFFWFFILTISGIMSGAWLSGRLAGKIAPKRQIRHGFVIMLVTSLV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCHHHCCCCHHHHHHHHHHHHHHHHHH NLAANLLFAPHVSWALFPIAVFAFGWALMVPVVTLLVLDLYPERRGMASSLQAFIGSTAN HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHH GLVAGLIAPLVMHSTPALATVSLGMMCIGLVSWAYLHHRWPEIGRAVSL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]