| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786272
Identifier: 91786272
GI number: 91786272
Start: 377357
End: 378289
Strand: Direct
Name: 91786272
Synonym: Bpro_0362
Alternate gene names: NA
Gene position: 377357-378289 (Clockwise)
Preceding gene: 91786271
Following gene: 91786273
Centisome position: 7.26
GC content: 52.95
Gene sequence:
>933_bases ATGGCTACGAGTGTTCTGAAAGTGTTGGCGTTTGATGGCGGATACAACGTTCCAATTTGGGTCGCACAGAAATTTGGATT TTTCGAAAGCAACGGCCTGCAGGTCGAGCTTTCTTTTACGCCGAATTCCGGCGCGCTCGTTCAGGCGCTGATGACGGGTT CTGCCGACATAGCGCTGGCGGGGTTCGACAATTTTGTGGCCTACCAAGAAGGGCAAGGCGAGGCAGCACTTGAACTGCCA CCAGACATTTTTTCTTTCATGGGCGGAGATAGTGGATTTCTTACGCTGGTCGCCAAGGGGGAGGTTACCTCCATGGAGCG ACTCAAGGGAAAAAAGGTGTCTGTTGATGCGATGACTACCGGTTTCGCATTTGCGCTACGCGAAATCCTGGAAAAGGAGG GGTTGCGCGACGGGGACATTGAATACGTCAAAGCAGGCGGCACTGCTCAGCGATTTTTGGGACTGATGGCAGGTCAGTAC GATGCGACGCTGCTTCGGACGCCTTACGAGATGCTTGCCATGGACCGTGGCTTCGTAGCCCTCACAACCGTGAGAGAGCA GCTTGGTCACTACATGGGAACCGTCGGAGCTACACGACGGGCATGGGCTAGCTCCCACGAAAGTCAGCTCTTGCAATTCA TTGTTAGCTATCGCGCCGCGCTGGATTGGTTGTACACGCCTGGAAACCGAAATACTGCCGTTGAACTACTGGTGGAGAAA GTTGCCGGACTTGATACAGCTATCGCCTCAAGTGCGCTGGACCTGCTTCTGGATGAGCAGGAGGGTTTGATAGCCGACAT GCGCATTGACCCCATGTCTGTTCAGACTGTATTAAAGCTGCGCAGCAAGTATGGAACACCTCAAAAAGATCTTATCGATC CCACTAAATACCTTGATCGGAGCTACCTGATCAAGGCATTCAACGCCGGTTAA
Upstream 100 bases:
>100_bases CGGGAGAGAAGCGGGCGCTTGCGAACAGAACAAATTTTGTCGCATGCATTCTCCTTGCCATGCCTTATCCGCGATAGAAA ACCTAGGGAAAGCAAAAAAG
Downstream 100 bases:
>100_bases ATCACCTTCGTGTATTTGAAAGACCTTTATGAAACTGTTTACAACGCTACTTCTTTCCATTTCTGCCGCTTTCTCGCTTC CCGCGCTGGCCCAGCCATAT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: Periplasmic Protein
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MATSVLKVLAFDGGYNVPIWVAQKFGFFESNGLQVELSFTPNSGALVQALMTGSADIALAGFDNFVAYQEGQGEAALELP PDIFSFMGGDSGFLTLVAKGEVTSMERLKGKKVSVDAMTTGFAFALREILEKEGLRDGDIEYVKAGGTAQRFLGLMAGQY DATLLRTPYEMLAMDRGFVALTTVREQLGHYMGTVGATRRAWASSHESQLLQFIVSYRAALDWLYTPGNRNTAVELLVEK VAGLDTAIASSALDLLLDEQEGLIADMRIDPMSVQTVLKLRSKYGTPQKDLIDPTKYLDRSYLIKAFNAG
Sequences:
>Translated_310_residues MATSVLKVLAFDGGYNVPIWVAQKFGFFESNGLQVELSFTPNSGALVQALMTGSADIALAGFDNFVAYQEGQGEAALELP PDIFSFMGGDSGFLTLVAKGEVTSMERLKGKKVSVDAMTTGFAFALREILEKEGLRDGDIEYVKAGGTAQRFLGLMAGQY DATLLRTPYEMLAMDRGFVALTTVREQLGHYMGTVGATRRAWASSHESQLLQFIVSYRAALDWLYTPGNRNTAVELLVEK VAGLDTAIASSALDLLLDEQEGLIADMRIDPMSVQTVLKLRSKYGTPQKDLIDPTKYLDRSYLIKAFNAG >Mature_309_residues ATSVLKVLAFDGGYNVPIWVAQKFGFFESNGLQVELSFTPNSGALVQALMTGSADIALAGFDNFVAYQEGQGEAALELPP DIFSFMGGDSGFLTLVAKGEVTSMERLKGKKVSVDAMTTGFAFALREILEKEGLRDGDIEYVKAGGTAQRFLGLMAGQYD ATLLRTPYEMLAMDRGFVALTTVREQLGHYMGTVGATRRAWASSHESQLLQFIVSYRAALDWLYTPGNRNTAVELLVEKV AGLDTAIASSALDLLLDEQEGLIADMRIDPMSVQTVLKLRSKYGTPQKDLIDPTKYLDRSYLIKAFNAG
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33732; Mature: 33601
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSVLKVLAFDGGYNVPIWVAQKFGFFESNGLQVELSFTPNSGALVQALMTGSADIALA CCHHHEEHEEECCCCCCCEEEEEECCCEECCCEEEEEEECCCCCHHHHHHHCCCCCEEEE GFDNFVAYQEGQGEAALELPPDIFSFMGGDSGFLTLVAKGEVTSMERLKGKKVSVDAMTT CCCCEEEEECCCCCEEEECCHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCEEEEHHHHH GFAFALREILEKEGLRDGDIEYVKAGGTAQRFLGLMAGQYDATLLRTPYEMLAMDRGFVA HHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCCH LTTVREQLGHYMGTVGATRRAWASSHESQLLQFIVSYRAALDWLYTPGNRNTAVELLVEK HHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH VAGLDTAIASSALDLLLDEQEGLIADMRIDPMSVQTVLKLRSKYGTPQKDLIDPTKYLDR HHCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHCCHHHHHCH SYLIKAFNAG HHHHEEECCC >Mature Secondary Structure ATSVLKVLAFDGGYNVPIWVAQKFGFFESNGLQVELSFTPNSGALVQALMTGSADIALA CHHHEEHEEECCCCCCCEEEEEECCCEECCCEEEEEEECCCCCHHHHHHHCCCCCEEEE GFDNFVAYQEGQGEAALELPPDIFSFMGGDSGFLTLVAKGEVTSMERLKGKKVSVDAMTT CCCCEEEEECCCCCEEEECCHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCEEEEHHHHH GFAFALREILEKEGLRDGDIEYVKAGGTAQRFLGLMAGQYDATLLRTPYEMLAMDRGFVA HHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCCH LTTVREQLGHYMGTVGATRRAWASSHESQLLQFIVSYRAALDWLYTPGNRNTAVELLVEK HHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH VAGLDTAIASSALDLLLDEQEGLIADMRIDPMSVQTVLKLRSKYGTPQKDLIDPTKYLDR HHCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHCCHHHHHCH SYLIKAFNAG HHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA