Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is braE [H]

Identifier: 91786264

GI number: 91786264

Start: 371010

End: 371945

Strand: Direct

Name: braE [H]

Synonym: Bpro_0354

Alternate gene names: 91786264

Gene position: 371010-371945 (Clockwise)

Preceding gene: 91786263

Following gene: 91786265

Centisome position: 7.13

GC content: 54.49

Gene sequence:

>936_bases
ATGTGCGCCATCCCACTCTTTATCCAGCAAAAATACCTGCTGCACGTGATTAGCCTCGCTATGATTTTCGGCATCGCTGC
GCTCTCGCTTCAGTTGCTTTTGGGATTCACGGGCTTGTTATCTATGGGGCAGGCGGCCTTTCTCGGGGTTGGGGCTTACA
CGGCGGGTATCCTTGCGGTCAAGCTGCAGTATCCATTCCTCGTCTGCTTTGTGGCTGCGGGTGTGGTCAGCGGGCTGATC
AGTTTGATCCTCGTTCCCATCACCAGGCTAAAAGGGGTCTACCTTTCAGTCGCAACGCTCGGTTTCACGATCGCCATCCA
TTTAGTGTTTCTGAATGAAGAGTGGCTGACCGGTGGATCACAAGGGCTGTCTTCAATACCGCCACCAGCGATAGGCTCGT
TGGCAATCGGCGGTGAGCAAGGCATTTACTACTTGTGTCTGGCGGTTGCCATCGGAAGCTTCGCCGCCTTTCACTTGCTT
GTTTCAAGCCGCTTCGGCCGTGCACTGCAAGCGATCAAACTTGACGAGGATGCTGCTCGTGCAAGCGGCATCAACGTCAC
TTTGTATAAAAGCCAGGCGTTTGTCACTGCTGCGGTCTTCACCGGGTGGGCCGGCGCTCTTTTCACTTATCACAACCAGT
ACCTCAATCCCAACGATTTCACTTTCTGGAAGTCAATTGAGATCGTCATCATGGTGGCGGTAGGCGGGATCGGCAGCCTT
GCAGGAGCCGTCTTTGGCGCTTTCGCGGTAACGCTGTTGCCTGAGGTCCTGGGCGACCTGGAAAACTACCGCATGATCAT
TTTTGGATCTTTGGTGGTCCTTTGCATGGGTCTCGGCCATAGCGGTCTAGCTGGCCTGATTGGTAGTGGTTTTCGTAAAT
GGATTTACTTCAGAGCTGCCGCGCCAGCCGCGGATCTGCAGGAGGTTCCGCAATGA

Upstream 100 bases:

>100_bases
CGGCCTTGCGGGTCTCCGCCGCCCTCAAAGGTAAGTTGTGACAACAGAAAAATTCAATACGAGCTGGTTGTGGGCGGGGC
GGCTATCGCTTGCCGCTGTC

Downstream 100 bases:

>100_bases
CCCAAATTCAAGTGAACGCGATGACACGCCGCTTTGGCGGCGTGTTCGCGGTCGATCAGGTCTCGACGGCCATTCCGAAA
GGAGAAATACGGGGGCTTAT

Product: inner-membrane translocator

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MCAIPLFIQQKYLLHVISLAMIFGIAALSLQLLLGFTGLLSMGQAAFLGVGAYTAGILAVKLQYPFLVCFVAAGVVSGLI
SLILVPITRLKGVYLSVATLGFTIAIHLVFLNEEWLTGGSQGLSSIPPPAIGSLAIGGEQGIYYLCLAVAIGSFAAFHLL
VSSRFGRALQAIKLDEDAARASGINVTLYKSQAFVTAAVFTGWAGALFTYHNQYLNPNDFTFWKSIEIVIMVAVGGIGSL
AGAVFGAFAVTLLPEVLGDLENYRMIIFGSLVVLCMGLGHSGLAGLIGSGFRKWIYFRAAAPAADLQEVPQ

Sequences:

>Translated_311_residues
MCAIPLFIQQKYLLHVISLAMIFGIAALSLQLLLGFTGLLSMGQAAFLGVGAYTAGILAVKLQYPFLVCFVAAGVVSGLI
SLILVPITRLKGVYLSVATLGFTIAIHLVFLNEEWLTGGSQGLSSIPPPAIGSLAIGGEQGIYYLCLAVAIGSFAAFHLL
VSSRFGRALQAIKLDEDAARASGINVTLYKSQAFVTAAVFTGWAGALFTYHNQYLNPNDFTFWKSIEIVIMVAVGGIGSL
AGAVFGAFAVTLLPEVLGDLENYRMIIFGSLVVLCMGLGHSGLAGLIGSGFRKWIYFRAAAPAADLQEVPQ
>Mature_311_residues
MCAIPLFIQQKYLLHVISLAMIFGIAALSLQLLLGFTGLLSMGQAAFLGVGAYTAGILAVKLQYPFLVCFVAAGVVSGLI
SLILVPITRLKGVYLSVATLGFTIAIHLVFLNEEWLTGGSQGLSSIPPPAIGSLAIGGEQGIYYLCLAVAIGSFAAFHLL
VSSRFGRALQAIKLDEDAARASGINVTLYKSQAFVTAAVFTGWAGALFTYHNQYLNPNDFTFWKSIEIVIMVAVGGIGSL
AGAVFGAFAVTLLPEVLGDLENYRMIIFGSLVVLCMGLGHSGLAGLIGSGFRKWIYFRAAAPAADLQEVPQ

Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]

COG id: COG4177

COG function: function code E; ABC-type branched-chain amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789865, Length=294, Percent_Identity=30.6122448979592, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR021807 [H]

Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]

EC number: NA

Molecular weight: Translated: 32804; Mature: 32804

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCAIPLFIQQKYLLHVISLAMIFGIAALSLQLLLGFTGLLSMGQAAFLGVGAYTAGILAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEE
KLQYPFLVCFVAAGVVSGLISLILVPITRLKGVYLSVATLGFTIAIHLVFLNEEWLTGGS
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHCCCC
QGLSSIPPPAIGSLAIGGEQGIYYLCLAVAIGSFAAFHLLVSSRFGRALQAIKLDEDAAR
CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ASGINVTLYKSQAFVTAAVFTGWAGALFTYHNQYLNPNDFTFWKSIEIVIMVAVGGIGSL
HCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEEEECCHHHH
AGAVFGAFAVTLLPEVLGDLENYRMIIFGSLVVLCMGLGHSGLAGLIGSGFRKWIYFRAA
HHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEC
APAADLQEVPQ
CCCHHHHHCCC
>Mature Secondary Structure
MCAIPLFIQQKYLLHVISLAMIFGIAALSLQLLLGFTGLLSMGQAAFLGVGAYTAGILAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEE
KLQYPFLVCFVAAGVVSGLISLILVPITRLKGVYLSVATLGFTIAIHLVFLNEEWLTGGS
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHCCCC
QGLSSIPPPAIGSLAIGGEQGIYYLCLAVAIGSFAAFHLLVSSRFGRALQAIKLDEDAAR
CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ASGINVTLYKSQAFVTAAVFTGWAGALFTYHNQYLNPNDFTFWKSIEIVIMVAVGGIGSL
HCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEEEECCHHHH
AGAVFGAFAVTLLPEVLGDLENYRMIIFGSLVVLCMGLGHSGLAGLIGSGFRKWIYFRAA
HHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEC
APAADLQEVPQ
CCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2120183; 10984043 [H]