| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is braC [H]
Identifier: 91786260
GI number: 91786260
Start: 368186
End: 369316
Strand: Direct
Name: braC [H]
Synonym: Bpro_0350
Alternate gene names: 91786260
Gene position: 368186-369316 (Clockwise)
Preceding gene: 91786259
Following gene: 91786261
Centisome position: 7.08
GC content: 54.64
Gene sequence:
>1131_bases ATGTTTGCGACCAGATTCTCAAAGTTACAAGCCTGCGTGATGTTTGCTGGGGTGGCGCTTGCCTTCTCAGCCGGAGCGCA AGTGAAAGTGGGTGTATTTGTCCCTCTTACGGGAGATGCGGCCGGGTACGGCCAGAGTGCTTTGGAGGCGATTCAGCTTG CAGTTAAACAGAAAAATGATGCCGGCGGGGTGCTCGGCCAAAAGATCGAATTGGTAGTGCGAGACGATGGCGCCAAGCCC GAGCAATCGGTAACCGTTGCCAAGCGCTTGGCCACGAGCGATGGAGTACTGGTCATGCTGGGTAGCATCTCCAGCCCTGC CAGCTTTGCGGCAACACAAGTGGCGCTTCAGACCGGCACGCCGCAAATCGTGTTGTTGGGTACCGCTCAGCGGATTACCA CCCAAGGCAACCCATGGGTCTTTCGTGGAACCATCCCCGATACGAAGCTGTCGGGAGATCTGGTTGAGTTCATCATCCGT AAATATCCGGGCAAGAAGAAAGTCGGCTACCTGTACGTGAACGACGATTTTGGTCGTGGCGGCTTTGAGGCTTTCAAGGC ACGTGCTGAAAGCTCCGGACTGACTATCGTCGCGGAGGAAAAGTACGCTCCAGGTGACTTGGACTTCACCAGCCAACTGA CCAAGATTCAGAGCGAAAATCCGGACGTATTTGTTGATTGGTCCCGCTACACTGAAGGCGCGCTGGTGGCGATTCAGGCC AAGCGCAAGGGCATGACATTGCCGCACTTCGGCTCAGAGGGACTCTCGCACCCCAACTTCATCAAACTTGCCGGGGACGC AAGCGACGGCATGATGTATCCCGTGCCTTTCAGCATGACCACGCAAAGCGGAAACAACATCGCCGTCACCTTGGCGCAGG ATATCAAGAAGACCTACAACAAGGAGATTGAGTACACGCATGCCTTGGCCTATGACGCCATGCGGGCTGTCATCTTCGCG ATTGAGAAATCCGGCACTACCACCGATAAGCTGAAATTCAGGGACGCCCTGAAGAGCCTGGAATTTGATTCAACCCGTGG AAAGTTCAAATTTGACGCGAAAGGCGATCCCACCTTGCTGCCTTCGATCGTCAAACTCTCAAGTGGTAAAGAGCAAGACG CCAACAAGTAA
Upstream 100 bases:
>100_bases TCCTCTGGCGAAGGCGGGTGTCTATGAAAAAGTGAGCGTGACGGGATTCCTCAAAAAGAGGGGTTGAGTAAGTTCGATCA ATTGAAAAAGGACCATTGAT
Downstream 100 bases:
>100_bases ACGACGAAGGAAACAGTCATGAAAAAAGAATTTATCCGCGGAACCTGGCAGAAGACGCGTGCCTTCTCTCCTGCGGTGAT CACAGAGGGCGGAAAAACGA
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MFATRFSKLQACVMFAGVALAFSAGAQVKVGVFVPLTGDAAGYGQSALEAIQLAVKQKNDAGGVLGQKIELVVRDDGAKP EQSVTVAKRLATSDGVLVMLGSISSPASFAATQVALQTGTPQIVLLGTAQRITTQGNPWVFRGTIPDTKLSGDLVEFIIR KYPGKKKVGYLYVNDDFGRGGFEAFKARAESSGLTIVAEEKYAPGDLDFTSQLTKIQSENPDVFVDWSRYTEGALVAIQA KRKGMTLPHFGSEGLSHPNFIKLAGDASDGMMYPVPFSMTTQSGNNIAVTLAQDIKKTYNKEIEYTHALAYDAMRAVIFA IEKSGTTTDKLKFRDALKSLEFDSTRGKFKFDAKGDPTLLPSIVKLSSGKEQDANK
Sequences:
>Translated_376_residues MFATRFSKLQACVMFAGVALAFSAGAQVKVGVFVPLTGDAAGYGQSALEAIQLAVKQKNDAGGVLGQKIELVVRDDGAKP EQSVTVAKRLATSDGVLVMLGSISSPASFAATQVALQTGTPQIVLLGTAQRITTQGNPWVFRGTIPDTKLSGDLVEFIIR KYPGKKKVGYLYVNDDFGRGGFEAFKARAESSGLTIVAEEKYAPGDLDFTSQLTKIQSENPDVFVDWSRYTEGALVAIQA KRKGMTLPHFGSEGLSHPNFIKLAGDASDGMMYPVPFSMTTQSGNNIAVTLAQDIKKTYNKEIEYTHALAYDAMRAVIFA IEKSGTTTDKLKFRDALKSLEFDSTRGKFKFDAKGDPTLLPSIVKLSSGKEQDANK >Mature_376_residues MFATRFSKLQACVMFAGVALAFSAGAQVKVGVFVPLTGDAAGYGQSALEAIQLAVKQKNDAGGVLGQKIELVVRDDGAKP EQSVTVAKRLATSDGVLVMLGSISSPASFAATQVALQTGTPQIVLLGTAQRITTQGNPWVFRGTIPDTKLSGDLVEFIIR KYPGKKKVGYLYVNDDFGRGGFEAFKARAESSGLTIVAEEKYAPGDLDFTSQLTKIQSENPDVFVDWSRYTEGALVAIQA KRKGMTLPHFGSEGLSHPNFIKLAGDASDGMMYPVPFSMTTQSGNNIAVTLAQDIKKTYNKEIEYTHALAYDAMRAVIFA IEKSGTTTDKLKFRDALKSLEFDSTRGKFKFDAKGDPTLLPSIVKLSSGKEQDANK
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=347, Percent_Identity=23.9193083573487, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789867, Length=354, Percent_Identity=24.2937853107345, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40410; Mature: 40410
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS00368 RIBORED_SMALL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFATRFSKLQACVMFAGVALAFSAGAQVKVGVFVPLTGDAAGYGQSALEAIQLAVKQKND CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCC AGGVLGQKIELVVRDDGAKPEQSVTVAKRLATSDGVLVMLGSISSPASFAATQVALQTGT CCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHEEEEEECCC PQIVLLGTAQRITTQGNPWVFRGTIPDTKLSGDLVEFIIRKYPGKKKVGYLYVNDDFGRG CEEEEEECCHHEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCC GFEAFKARAESSGLTIVAEEKYAPGDLDFTSQLTKIQSENPDVFVDWSRYTEGALVAIQA HHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCEEEEEEE KRKGMTLPHFGSEGLSHPNFIKLAGDASDGMMYPVPFSMTTQSGNNIAVTLAQDIKKTYN CCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCEEEECCCCEEEEEEHHHHHHHHC KEIEYTHALAYDAMRAVIFAIEKSGTTTDKLKFRDALKSLEFDSTRGKFKFDAKGDPTLL CCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHH PSIVKLSSGKEQDANK HHHHHHCCCCCCCCCC >Mature Secondary Structure MFATRFSKLQACVMFAGVALAFSAGAQVKVGVFVPLTGDAAGYGQSALEAIQLAVKQKND CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCC AGGVLGQKIELVVRDDGAKPEQSVTVAKRLATSDGVLVMLGSISSPASFAATQVALQTGT CCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHEEEEEECCC PQIVLLGTAQRITTQGNPWVFRGTIPDTKLSGDLVEFIIRKYPGKKKVGYLYVNDDFGRG CEEEEEECCHHEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCC GFEAFKARAESSGLTIVAEEKYAPGDLDFTSQLTKIQSENPDVFVDWSRYTEGALVAIQA HHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCEEEEEEE KRKGMTLPHFGSEGLSHPNFIKLAGDASDGMMYPVPFSMTTQSGNNIAVTLAQDIKKTYN CCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCEEEECCCCEEEEEEHHHHHHHHC KEIEYTHALAYDAMRAVIFAIEKSGTTTDKLKFRDALKSLEFDSTRGKFKFDAKGDPTLL CCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHH PSIVKLSSGKEQDANK HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]