| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786251
Identifier: 91786251
GI number: 91786251
Start: 362086
End: 362589
Strand: Direct
Name: 91786251
Synonym: Bpro_0340
Alternate gene names: NA
Gene position: 362086-362589 (Clockwise)
Preceding gene: 91786246
Following gene: 91786252
Centisome position: 6.96
GC content: 69.44
Gene sequence:
>504_bases ATGACAACACCTGCAGGCACCCCCTCCGAATCCGCCGTCACGCCAGCAGCACCGATGCTGGTGCTGGACCGCAAGAGCAA CGGCCGCGCCATCTACGACCCCGAAGCCAAACGAGCCTTGGTGCAGCAGTGCCTGCAGCCCGGCGTATCGGTGGCGGCCA CAGCCCTGCGCGCCGGCGTGAACGCCAATCTGTTGCGCAAGTGGATCACCAAACACCAGCGCGGCATCGGCGAGCGAGCA TCTGCGCCGCCCAGCACCATCGCTGGCGACCGGATGCCCGTCGTGCTGCGCTGCGATACTGCTGCCGCGATGACCGCCGC ACCAGCGCCTGGCAGCTTGGCGGGCGCGCCGGCTCCCATCACTATCGAACTGCACGGTGCGCGCGTGCACGTTGCCAGCG GCGTCGATCCTACAACGCTCGCAGCCGGGTGCGGGCGTTGCGCACCACCGCATGATCGCGCCCCCATCGGGCACGCGGGT GTGGCTGGCCGCCGGCATCACTGA
Upstream 100 bases:
>100_bases GAAGACATAACTTGTTAGTGACTAGAACAGTGATATCCAAGTAAGCGTCCGCCCGGTACCGTTCTTGTCATCTCATAGGT GACCTGAGAGCACGGCCTGC
Downstream 100 bases:
>100_bases CATGCGCTGCGGCTTTGACAGCCTGGCCGCCAGGATCCAGACCGCCCTGACCGAGAATCCCTTCTCGGGCCACATCTTTG TCTACCGTGGCCGCCGCGGT
Product: transposase IS3/IS911
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTTPAGTPSESAVTPAAPMLVLDRKSNGRAIYDPEAKRALVQQCLQPGVSVAATALRAGVNANLLRKWITKHQRGIGERA SAPPSTIAGDRMPVVLRCDTAAAMTAAPAPGSLAGAPAPITIELHGARVHVASGVDPTTLAAGCGRCAPPHDRAPIGHAG VAGRRHH
Sequences:
>Translated_167_residues MTTPAGTPSESAVTPAAPMLVLDRKSNGRAIYDPEAKRALVQQCLQPGVSVAATALRAGVNANLLRKWITKHQRGIGERA SAPPSTIAGDRMPVVLRCDTAAAMTAAPAPGSLAGAPAPITIELHGARVHVASGVDPTTLAAGCGRCAPPHDRAPIGHAG VAGRRHH >Mature_166_residues TTPAGTPSESAVTPAAPMLVLDRKSNGRAIYDPEAKRALVQQCLQPGVSVAATALRAGVNANLLRKWITKHQRGIGERAS APPSTIAGDRMPVVLRCDTAAAMTAAPAPGSLAGAPAPITIELHGARVHVASGVDPTTLAAGCGRCAPPHDRAPIGHAGV AGRRHH
Specific function: Unknown
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17001; Mature: 16870
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPAGTPSESAVTPAAPMLVLDRKSNGRAIYDPEAKRALVQQCLQPGVSVAATALRAGV CCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHCCHHHHHHHHHCCC NANLLRKWITKHQRGIGERASAPPSTIAGDRMPVVLRCDTAAAMTAAPAPGSLAGAPAPI CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCE TIELHGARVHVASGVDPTTLAAGCGRCAPPHDRAPIGHAGVAGRRHH EEEECCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTPAGTPSESAVTPAAPMLVLDRKSNGRAIYDPEAKRALVQQCLQPGVSVAATALRAGV CCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHCCHHHHHHHHHCCC NANLLRKWITKHQRGIGERASAPPSTIAGDRMPVVLRCDTAAAMTAAPAPGSLAGAPAPI CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCE TIELHGARVHVASGVDPTTLAAGCGRCAPPHDRAPIGHAGVAGRRHH EEEECCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA