| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786243
Identifier: 91786243
GI number: 91786243
Start: 353693
End: 354544
Strand: Direct
Name: 91786243
Synonym: Bpro_0332
Alternate gene names: NA
Gene position: 353693-354544 (Clockwise)
Preceding gene: 91786239
Following gene: 91786244
Centisome position: 6.8
GC content: 67.72
Gene sequence:
>852_bases GTGGGCAATCCGCTGCAGGCGCTGCAGGCGTCACTGCATCCACCTGCATTCGCCCAGCCGGCCAGGCCCCGGCTGCTCGT GGCAGGGGTTGCTGGCGTCCTGGGCAGCGAGGTCTTGCGCCGCCTTGTGGGCAGTGGCCGGTTTGCGCATACGGAAGTGC TGGTTTCCGAACCCATGGCCACCGGCCTGCCGGCGGTGGGTATTGCGCTGGCCGCTCCCCTGCCGATTGAGCAGTGGCCC GCCAGACCGCAACCGGTGCACACCGGCCTGGTCATGTTCGAGCCGCCCCGGCTTTACAACGGACGTGAACGCACGCTCTG GACGCCAGCCCCTGAGCAATTGCCAGCGCTGGCCCGCTGGCTCAAGCGCTGCGGCGTGCAAACCCTGGTCATCGTGGTGC CGCACGCGTCGGGGCGTTTGCCCGATGCGCTCAAACGCGGCCTCGCCAATCTGGACGAGCAGGCCGTTGTCGCCCTCGGC TTTGAGCGCGTGCTGCTGGTTCGTTCGGCCCGCAAGGCTGAAGCGCCGGCGGTTTCGGGTCTGCTGGAGAAGACGGCGGG CTGGATGCTCTCCACCTTGAAGTACATGGTCCCGGCGAGCGAGCAGCCGGTGCGCCCGGCCAAGCTGGCCGAGTTTGTGG ATGCTGCCTTGCGCGTGTTGCCCCCGGGCACACATGTGGCTGCGCCGGAACTGCTATGGCAGGCGGGCCAGAGCACCACC ACAGGCCAAAGTGCCGGCCAGGCCCGGAGCATGCAGGGCGTGGTTCAAGCCTGGCTTGCTGCAGGGCACAATCCCAAGAA GAACTCAGCACCGGACTCAACACCGGCTCTCCATCGCCCATCGCCAGATTGA
Upstream 100 bases:
>100_bases AAAACTACGGGATTTCATGGAAGGGCCTCCAAAATACAAGCCGCAACACTAACATAGTCGAATGTCGTCCACTCCTTCCG CACCTCGCAGCACCTTGCCG
Downstream 100 bases:
>100_bases CTCCATGTCCAAACCCAAAGTCCCACCCGCCACTACCGGTAACGCCGACGACATCGAGGCTGCTTTTTACGAAGCATTGC AAAGCGGGGACATCGAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MGNPLQALQASLHPPAFAQPARPRLLVAGVAGVLGSEVLRRLVGSGRFAHTEVLVSEPMATGLPAVGIALAAPLPIEQWP ARPQPVHTGLVMFEPPRLYNGRERTLWTPAPEQLPALARWLKRCGVQTLVIVVPHASGRLPDALKRGLANLDEQAVVALG FERVLLVRSARKAEAPAVSGLLEKTAGWMLSTLKYMVPASEQPVRPAKLAEFVDAALRVLPPGTHVAAPELLWQAGQSTT TGQSAGQARSMQGVVQAWLAAGHNPKKNSAPDSTPALHRPSPD
Sequences:
>Translated_283_residues MGNPLQALQASLHPPAFAQPARPRLLVAGVAGVLGSEVLRRLVGSGRFAHTEVLVSEPMATGLPAVGIALAAPLPIEQWP ARPQPVHTGLVMFEPPRLYNGRERTLWTPAPEQLPALARWLKRCGVQTLVIVVPHASGRLPDALKRGLANLDEQAVVALG FERVLLVRSARKAEAPAVSGLLEKTAGWMLSTLKYMVPASEQPVRPAKLAEFVDAALRVLPPGTHVAAPELLWQAGQSTT TGQSAGQARSMQGVVQAWLAAGHNPKKNSAPDSTPALHRPSPD >Mature_282_residues GNPLQALQASLHPPAFAQPARPRLLVAGVAGVLGSEVLRRLVGSGRFAHTEVLVSEPMATGLPAVGIALAAPLPIEQWPA RPQPVHTGLVMFEPPRLYNGRERTLWTPAPEQLPALARWLKRCGVQTLVIVVPHASGRLPDALKRGLANLDEQAVVALGF ERVLLVRSARKAEAPAVSGLLEKTAGWMLSTLKYMVPASEQPVRPAKLAEFVDAALRVLPPGTHVAAPELLWQAGQSTTT GQSAGQARSMQGVVQAWLAAGHNPKKNSAPDSTPALHRPSPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30048; Mature: 29917
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNPLQALQASLHPPAFAQPARPRLLVAGVAGVLGSEVLRRLVGSGRFAHTEVLVSEPMA CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHH TGLPAVGIALAAPLPIEQWPARPQPVHTGLVMFEPPRLYNGRERTLWTPAPEQLPALARW HCCCHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCHHHHHHHHHH LKRCGVQTLVIVVPHASGRLPDALKRGLANLDEQAVVALGFERVLLVRSARKAEAPAVSG HHHCCCEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH LLEKTAGWMLSTLKYMVPASEQPVRPAKLAEFVDAALRVLPPGTHVAAPELLWQAGQSTT HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC TGQSAGQARSMQGVVQAWLAAGHNPKKNSAPDSTPALHRPSPD CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GNPLQALQASLHPPAFAQPARPRLLVAGVAGVLGSEVLRRLVGSGRFAHTEVLVSEPMA CCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHH TGLPAVGIALAAPLPIEQWPARPQPVHTGLVMFEPPRLYNGRERTLWTPAPEQLPALARW HCCCHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCHHHHHHHHHH LKRCGVQTLVIVVPHASGRLPDALKRGLANLDEQAVVALGFERVLLVRSARKAEAPAVSG HHHCCCEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH LLEKTAGWMLSTLKYMVPASEQPVRPAKLAEFVDAALRVLPPGTHVAAPELLWQAGQSTT HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC TGQSAGQARSMQGVVQAWLAAGHNPKKNSAPDSTPALHRPSPD CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA