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The map label for this gene is atpD [H]

Identifier: 91786238

GI number: 91786238

Start: 349148

End: 350551

Strand: Direct

Name: atpD [H]

Synonym: Bpro_0327

Alternate gene names: 91786238

Gene position: 349148-350551 (Clockwise)

Preceding gene: 91786237

Following gene: 91786239

Centisome position: 6.71

GC content: 62.18

Gene sequence:

>1404_bases
ATGGCTCAGGCTCAAGGCAAGATTGTTCAGTGTATTGGTGCGGTGGTGGACGTGGAGTTTGCGCGTGACCAGATGCCCAA
GATTTATGACGCACTCAAGATGGAAGGCTCCGCGCTGACGCTGGAAGTCCAGCAGCAGCTGGGTGACGGGATTGTGCGTA
CCATCGCGCTGGGCACGTCGGATGGCCTGCGCCGCGGCAACACGGTGTACAACACCGGCGCCAACATCACGGTTCCCGTG
GGCAAGGCCACGCTGGGCCGCATCATGGACGTGCTGGGTGCGCCCATCGACGAGCGCGGCCCGGTTGATCAGACGCTGAC
CGCCCCGATTCACCGCAAGGCTCCAGCCTACGACGAACTGTCGCCATCGCAGGAACTGCTGGAAACCGGCATCAAGGTGA
TTGACTTGGTGTGCCCGTTCGCCAAGGGCGGCAAGGTGGGCCTGTTCGGCGGCGCCGGCGTCGGCAAGACCGTGAACATG
ATGGAGCTCATCAACAACATCGCCAAGGCGCACTCGGGCCTGTCCGTGTTTGCCGGTGTGGGCGAGCGTACCCGTGAAGG
CAACGACTTCTACCACGAGATGGCCGATTCCGGCGTGGTGAACCTCGAGAACCTCGGCGAGTCCAAAGTGGCCATGGTGT
ATGGCCAGATGAACGAGCCCCCAGGCAACCGTCTGCGCGTGGCGCTGACCGGCCTGACGATCGCCGAGTCCTTCCGTGAC
GAAGGCCGCGACGTGCTGTTCTTCGTGGACAACATCTACCGCTACACGCTGGCTGGTACCGAAGTGTCTGCGCTGCTGGG
CCGCATGCCTTCCGCCGTGGGCTACCAGCCAACGCTGGCCGAGGAAATGGGTCGCCTGCAAGAGCGTATTACCTCCACCA
AGGTCGGTTCCATCACGTCCATCCAGGCCGTTTACGTGCCGGCGGACGACTTGACCGACCCCTCGCCTGCCACGACCTTT
GCCCACCTGGACTCCACCGTGGTGCTGAGCCGTGACATCGCCTCGTTGGGTATCTACCCCGCCGTGGACCCGTTGGATTC
GACCAGCCGCCAGCTCGACCCCAACGTGGTGGGTGAAGACCACTACGCCACTGCCCGTGCAGTGCAGGGCACGCTGCAGC
GTTACAAGGAACTGCGCGACATTATTGCGATTCTGGGCATGGACGAACTGGCCCCTGAAGACAAGCTGGCCGTGGCCCGC
GCCCGCAAGATCCAGCGTTTCCTGTCGCAGCCCTTCCACGTCGCTGAAGTGTTCACCGGCTCGCCCGGCAAGTACGTGAG
CCTGGCCGAAACCATTCGCGGCTTCAAGATGATTGTGGCTGGCGAGTGTGATCACCTGCCAGAGCAGGCTTTCTACATGG
TCGGCACCATTGACGAAGCGTTTGAAAAAGCGAAAAAAGTTTAA

Upstream 100 bases:

>100_bases
CGATCACGAAAGAACTTTCGGAAATCGTTGCCGGTGCAGCAGCTGTCTGACCCCGGGTCAACAGCGATTCAAGATTTAAA
GAACGGAAAAGGATTCAATC

Downstream 100 bases:

>100_bases
CGGGCGGTTCATATGAATACCATCCACGTCGACGTCGTCAGCGCAGAAGAGTCCATCTTCTCCGGTGAAGCCAGGTTTGT
GGCTTTACCCGGTGAGGCCG

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MAQAQGKIVQCIGAVVDVEFARDQMPKIYDALKMEGSALTLEVQQQLGDGIVRTIALGTSDGLRRGNTVYNTGANITVPV
GKATLGRIMDVLGAPIDERGPVDQTLTAPIHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNM
MELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRD
EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPATTF
AHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEDHYATARAVQGTLQRYKELRDIIAILGMDELAPEDKLAVAR
ARKIQRFLSQPFHVAEVFTGSPGKYVSLAETIRGFKMIVAGECDHLPEQAFYMVGTIDEAFEKAKKV

Sequences:

>Translated_467_residues
MAQAQGKIVQCIGAVVDVEFARDQMPKIYDALKMEGSALTLEVQQQLGDGIVRTIALGTSDGLRRGNTVYNTGANITVPV
GKATLGRIMDVLGAPIDERGPVDQTLTAPIHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNM
MELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRD
EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPATTF
AHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEDHYATARAVQGTLQRYKELRDIIAILGMDELAPEDKLAVAR
ARKIQRFLSQPFHVAEVFTGSPGKYVSLAETIRGFKMIVAGECDHLPEQAFYMVGTIDEAFEKAKKV
>Mature_466_residues
AQAQGKIVQCIGAVVDVEFARDQMPKIYDALKMEGSALTLEVQQQLGDGIVRTIALGTSDGLRRGNTVYNTGANITVPVG
KATLGRIMDVLGAPIDERGPVDQTLTAPIHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM
ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDE
GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPATTFA
HLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEDHYATARAVQGTLQRYKELRDIIAILGMDELAPEDKLAVARA
RKIQRFLSQPFHVAEVFTGSPGKYVSLAETIRGFKMIVAGECDHLPEQAFYMVGTIDEAFEKAKKV

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=467, Percent_Identity=69.8072805139186, Blast_Score=654, Evalue=0.0,
Organism=Homo sapiens, GI19913424, Length=321, Percent_Identity=27.7258566978193, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI50345984, Length=328, Percent_Identity=24.390243902439, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI4757810, Length=328, Percent_Identity=24.390243902439, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI19913426, Length=429, Percent_Identity=25.8741258741259, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI19913428, Length=417, Percent_Identity=25.6594724220624, Blast_Score=94, Evalue=3e-19,
Organism=Escherichia coli, GI1790170, Length=466, Percent_Identity=79.3991416309013, Blast_Score=739, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=312, Percent_Identity=32.0512820512821, Blast_Score=141, Evalue=1e-34,
Organism=Escherichia coli, GI1790172, Length=365, Percent_Identity=24.9315068493151, Blast_Score=108, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI25144756, Length=469, Percent_Identity=68.2302771855011, Blast_Score=642, Evalue=0.0,
Organism=Caenorhabditis elegans, GI71988080, Length=328, Percent_Identity=25, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17565854, Length=321, Percent_Identity=28.3489096573209, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71988063, Length=328, Percent_Identity=25, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17510931, Length=357, Percent_Identity=25.4901960784314, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17570191, Length=417, Percent_Identity=25.8992805755396, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71988074, Length=314, Percent_Identity=22.9299363057325, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322581, Length=457, Percent_Identity=67.1772428884026, Blast_Score=622, Evalue=1e-179,
Organism=Saccharomyces cerevisiae, GI6319370, Length=451, Percent_Identity=26.1640798226164, Blast_Score=108, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6319603, Length=403, Percent_Identity=26.7990074441687, Blast_Score=103, Evalue=5e-23,
Organism=Saccharomyces cerevisiae, GI6320016, Length=215, Percent_Identity=25.1162790697674, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24638766, Length=466, Percent_Identity=68.2403433476395, Blast_Score=639, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=467, Percent_Identity=63.8115631691649, Blast_Score=592, Evalue=1e-169,
Organism=Drosophila melanogaster, GI20129479, Length=320, Percent_Identity=29.375, Blast_Score=108, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24583988, Length=320, Percent_Identity=27.1875, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24583986, Length=320, Percent_Identity=27.1875, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24583984, Length=320, Percent_Identity=27.1875, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24583992, Length=320, Percent_Identity=26.875, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24658560, Length=339, Percent_Identity=25.0737463126844, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI281361666, Length=410, Percent_Identity=26.8292682926829, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24646341, Length=410, Percent_Identity=26.8292682926829, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17136796, Length=410, Percent_Identity=26.8292682926829, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24638768, Length=91, Percent_Identity=51.6483516483517, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 50337; Mature: 50206

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQAQGKIVQCIGAVVDVEFARDQMPKIYDALKMEGSALTLEVQQQLGDGIVRTIALGTS
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEHHHHCCHHHHHEEECCC
DGLRRGNTVYNTGANITVPVGKATLGRIMDVLGAPIDERGPVDQTLTAPIHRKAPAYDEL
CCCCCCCEEEECCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHCCCCCCCCC
SPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV
CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEECCC
GERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRD
CCCCCCCCHHHHHHHCCCCEEHHHCCCCEEEEEEECCCCCCCCEEEEEEECHHHHHHHHH
EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITS
CCCEEEEEEECHHHEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
IQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGED
EEEEEECCCCCCCCCCCCHHHHCCCEEEEEHHHHHHCCCCCCCCCCCCHHHCCCCCCCCC
HYATARAVQGTLQRYKELRDIIAILGMDELAPEDKLAVARARKIQRFLSQPFHVAEVFTG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEHEEEC
SPGKYVSLAETIRGFKMIVAGECDHLPEQAFYMVGTIDEAFEKAKKV
CCCCEEHHHHHHCCCEEEEECCCCCCCHHHEEEEHHHHHHHHHHHCC
>Mature Secondary Structure 
AQAQGKIVQCIGAVVDVEFARDQMPKIYDALKMEGSALTLEVQQQLGDGIVRTIALGTS
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEHHHHCCHHHHHEEECCC
DGLRRGNTVYNTGANITVPVGKATLGRIMDVLGAPIDERGPVDQTLTAPIHRKAPAYDEL
CCCCCCCEEEECCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHCCCCCCCCC
SPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV
CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEECCC
GERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRD
CCCCCCCCHHHHHHHCCCCEEHHHCCCCEEEEEEECCCCCCCCEEEEEEECHHHHHHHHH
EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITS
CCCEEEEEEECHHHEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
IQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGED
EEEEEECCCCCCCCCCCCHHHHCCCEEEEEHHHHHHCCCCCCCCCCCCHHHCCCCCCCCC
HYATARAVQGTLQRYKELRDIIAILGMDELAPEDKLAVARARKIQRFLSQPFHVAEVFTG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEHEEEC
SPGKYVSLAETIRGFKMIVAGECDHLPEQAFYMVGTIDEAFEKAKKV
CCCCEEHHHHHHCCCEEEEECCCCCCCHHHEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA