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The map label for this gene is ompA [H]

Identifier: 91786221

GI number: 91786221

Start: 334155

End: 335978

Strand: Direct

Name: ompA [H]

Synonym: Bpro_0310

Alternate gene names: 91786221

Gene position: 334155-335978 (Clockwise)

Preceding gene: 91786217

Following gene: 91786231

Centisome position: 6.43

GC content: 65.62

Gene sequence:

>1824_bases
ATGAAAGCGAACTTCTCAATAATCGCTGCGGCCGTGTTGACGAGCCTGGCAGCGCAGGCACAGACATTGCCCGAGCCCAT
GATTGACGCAGCACGCAAGGCGGTAGTCAGCAACCCCGAGGTGCAGGCCCGCTGGCACGGCTTCCAGGCTGCCGGCAACG
AGCGAGACGTGGCCCGTGGCGGCTACTTTCCCCAGATCGACCTGCGCGCCGGCACCGGCCGCGAGAGCCGCGAGACGCCA
TTGACCGACTATGGCCGTTACAACTTCCGTGGCACGACGCTCACGCTCAACCAGATGCTGTTTGACGGGCTGTTCACGCC
CAACGAAGTCAAGCGCCTGGGCTACGCCAAGCTCACCCGCTACTACGAACTGCAGGAAGTCTCCGAGACCGCCGCGCTCG
AAGCCGTGCGCGCCTACGCCGACGTCGTGCGCTACCGCGAGCTGGTCGATACGGCCACGCAAAACTACGTCGTGCACAAG
CAGACCACCGGCCAGGTCGAAGAGCGCTCCAGTGCCGGCGTGGGCCGCCGCGTCGACGTCGAGCAGGCCACCGGCCGTCT
CGCGCTGGCCGAGGCCAACCTGCTGACCGAGCTGACCAACTTGCACGATGTGAGTGCACGCTACCTGCGCATTGTTGGCG
AGAAGCCGCCGGAGGCCCTGCCCAAGCTGCCCGCCAAGTTTCAGATCGGCCCCATGCCCGCCTCCACCGAAATGTTGATG
AAAGACGGCCTGCCCAACAGCCCCACCATCAATGCCGCGCTGGAGAACGTGCGCTCCATGAAAACGGCCATCGCCTCACG
CAAGGCCGCCTACATGCCGCGCGTGGACCTGCGGCTGTATGACTCGCGGGACCGCAACCTGCAGGGCGTGACCGGCACCA
CCCGCGTCAATGGCATCGAGCTGGTGCTCAACTACAACCTGTTTCGCGGCGGCGCCGACAAGGCGCGCGAGCGCCAGGCG
GTCGACCTGCACGAGCAGGCGCGCGACCTGAAGGAAAAGGCCTGCCGCGACGTGCGCCAGACCCTGTCGATCGCCTTCAG
CGATGTGAGAACCCTCAACGAGCAGCTGGCCTACCGCGACCAGCACCGGCTGTCGACCGAGAAATCGCGCGAAGCCTACC
TGCAGCAGTTCGAGCTGGGCCAGCGCACGCTGCTGGACCTGCTGGACAGCCAGAACGAATACTTCCAGGCCAACCGCTCC
TACGTCAACGCCAGCTACGACCAGATCATTGCGCAGGCGCGCACGCTGGCGGGCATGGGGCAGTTGGTGACGGCGCTCAA
CGTCAAGCGCGGCGATGTGCCCAGCGCCCAGGATGCCGGGCAGGACCGCACCGGCATCGACCCGGCCGAGCTGTGCCCGC
AGGATGAGACCGTGGTCGATACCATGGAGAAAATCAAGGCGGGGACGGTCATTCCGCCGCGCGCACGTGCGACGGTGGCA
CCCGCACCCGGACAGGCGCTTCCCGCCAAGATCAGCTTGTCGGCCGATACGCTGTTTGACTTTGACAAGTCGACCATCAA
GGCCGGTGGCACGGGCAAGCTCGACGCGCTGGTGGACCGCCTCAAGGGCGTCAACGTCGACGTGGTGATCGCCGTGGGCC
ATACCGATTCCGTGGGCACGGATGCCTACAACCAGCGCCTGTCACTGGCACGCGCCGATTCGGTCAAGGCCTACCTGGTC
AGCAAAGGCGTGGATCGCCAGCGCATTCGTACCGAGGGGCGCGGTGAAAGCCAGCCAGTGGCCGACAACGCCACGGCAGA
AGGCCGCGCCAAAAACCGCCGTGTGGACATTGAAGTGGTAGAGGCACGGCCTGCAGCCAAATAA

Upstream 100 bases:

>100_bases
TGCGCGGCGCGTGATGCGCATCCCAAGAATAGGGGATATCCAAACCAACATTTTGAGGCTATAACCAATACCCCGAAACA
CTAACTAACAAGGTGGTTGC

Downstream 100 bases:

>100_bases
GATGCCCGCGGACTGAACCCGGCGCTTTGAACCGGGTAGGGAGGAGGGTGGTGATGGCGCGCAGCCGTCGCCACCCTTTC
TTTATTGCCCGATCGTACGT

Product: Type I secretion outer membrane protein TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 607; Mature: 607

Protein sequence:

>607_residues
MKANFSIIAAAVLTSLAAQAQTLPEPMIDAARKAVVSNPEVQARWHGFQAAGNERDVARGGYFPQIDLRAGTGRESRETP
LTDYGRYNFRGTTLTLNQMLFDGLFTPNEVKRLGYAKLTRYYELQEVSETAALEAVRAYADVVRYRELVDTATQNYVVHK
QTTGQVEERSSAGVGRRVDVEQATGRLALAEANLLTELTNLHDVSARYLRIVGEKPPEALPKLPAKFQIGPMPASTEMLM
KDGLPNSPTINAALENVRSMKTAIASRKAAYMPRVDLRLYDSRDRNLQGVTGTTRVNGIELVLNYNLFRGGADKARERQA
VDLHEQARDLKEKACRDVRQTLSIAFSDVRTLNEQLAYRDQHRLSTEKSREAYLQQFELGQRTLLDLLDSQNEYFQANRS
YVNASYDQIIAQARTLAGMGQLVTALNVKRGDVPSAQDAGQDRTGIDPAELCPQDETVVDTMEKIKAGTVIPPRARATVA
PAPGQALPAKISLSADTLFDFDKSTIKAGGTGKLDALVDRLKGVNVDVVIAVGHTDSVGTDAYNQRLSLARADSVKAYLV
SKGVDRQRIRTEGRGESQPVADNATAEGRAKNRRVDIEVVEARPAAK

Sequences:

>Translated_607_residues
MKANFSIIAAAVLTSLAAQAQTLPEPMIDAARKAVVSNPEVQARWHGFQAAGNERDVARGGYFPQIDLRAGTGRESRETP
LTDYGRYNFRGTTLTLNQMLFDGLFTPNEVKRLGYAKLTRYYELQEVSETAALEAVRAYADVVRYRELVDTATQNYVVHK
QTTGQVEERSSAGVGRRVDVEQATGRLALAEANLLTELTNLHDVSARYLRIVGEKPPEALPKLPAKFQIGPMPASTEMLM
KDGLPNSPTINAALENVRSMKTAIASRKAAYMPRVDLRLYDSRDRNLQGVTGTTRVNGIELVLNYNLFRGGADKARERQA
VDLHEQARDLKEKACRDVRQTLSIAFSDVRTLNEQLAYRDQHRLSTEKSREAYLQQFELGQRTLLDLLDSQNEYFQANRS
YVNASYDQIIAQARTLAGMGQLVTALNVKRGDVPSAQDAGQDRTGIDPAELCPQDETVVDTMEKIKAGTVIPPRARATVA
PAPGQALPAKISLSADTLFDFDKSTIKAGGTGKLDALVDRLKGVNVDVVIAVGHTDSVGTDAYNQRLSLARADSVKAYLV
SKGVDRQRIRTEGRGESQPVADNATAEGRAKNRRVDIEVVEARPAAK
>Mature_607_residues
MKANFSIIAAAVLTSLAAQAQTLPEPMIDAARKAVVSNPEVQARWHGFQAAGNERDVARGGYFPQIDLRAGTGRESRETP
LTDYGRYNFRGTTLTLNQMLFDGLFTPNEVKRLGYAKLTRYYELQEVSETAALEAVRAYADVVRYRELVDTATQNYVVHK
QTTGQVEERSSAGVGRRVDVEQATGRLALAEANLLTELTNLHDVSARYLRIVGEKPPEALPKLPAKFQIGPMPASTEMLM
KDGLPNSPTINAALENVRSMKTAIASRKAAYMPRVDLRLYDSRDRNLQGVTGTTRVNGIELVLNYNLFRGGADKARERQA
VDLHEQARDLKEKACRDVRQTLSIAFSDVRTLNEQLAYRDQHRLSTEKSREAYLQQFELGQRTLLDLLDSQNEYFQANRS
YVNASYDQIIAQARTLAGMGQLVTALNVKRGDVPSAQDAGQDRTGIDPAELCPQDETVVDTMEKIKAGTVIPPRARATVA
PAPGQALPAKISLSADTLFDFDKSTIKAGGTGKLDALVDRLKGVNVDVVIAVGHTDSVGTDAYNQRLSLARADSVKAYLV
SKGVDRQRIRTEGRGESQPVADNATAEGRAKNRRVDIEVVEARPAAK

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=109, Percent_Identity=42.2018348623853, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787191, Length=122, Percent_Identity=42.6229508196721, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1788957, Length=68, Percent_Identity=45.5882352941176, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 66690; Mature: 66690

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANFSIIAAAVLTSLAAQAQTLPEPMIDAARKAVVSNPEVQARWHGFQAAGNERDVARG
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCEECCCCCCCHHCC
GYFPQIDLRAGTGRESRETPLTDYGRYNFRGTTLTLNQMLFDGLFTPNEVKRLGYAKLTR
CCCCEEEEECCCCCCCCCCCCCCCCCCEECCCEEEHHHHHHHCCCCHHHHHHHHHHHHHH
YYELQEVSETAALEAVRAYADVVRYRELVDTATQNYVVHKQTTGQVEERSSAGVGRRVDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHCCCCCCEEEH
EQATGRLALAEANLLTELTNLHDVSARYLRIVGEKPPEALPKLPAKFQIGPMPASTEMLM
HHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEECCCCCCHHHHH
KDGLPNSPTINAALENVRSMKTAIASRKAAYMPRVDLRLYDSRDRNLQGVTGTTRVNGIE
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEE
LVLNYNLFRGGADKARERQAVDLHEQARDLKEKACRDVRQTLSIAFSDVRTLNEQLAYRD
EEEEECEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHRLSTEKSREAYLQQFELGQRTLLDLLDSQNEYFQANRSYVNASYDQIIAQARTLAGMG
HHHHCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHH
QLVTALNVKRGDVPSAQDAGQDRTGIDPAELCPQDETVVDTMEKIKAGTVIPPRARATVA
HHHHHHCCCCCCCCCCHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEC
PAPGQALPAKISLSADTLFDFDKSTIKAGGTGKLDALVDRLKGVNVDVVIAVGHTDSVGT
CCCCCCCCCEEEECHHHHHHCCHHHCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCC
DAYNQRLSLARADSVKAYLVSKGVDRQRIRTEGRGESQPVADNATAEGRAKNRRVDIEVV
HHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
EARPAAK
CCCCCCC
>Mature Secondary Structure
MKANFSIIAAAVLTSLAAQAQTLPEPMIDAARKAVVSNPEVQARWHGFQAAGNERDVARG
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCEECCCCCCCHHCC
GYFPQIDLRAGTGRESRETPLTDYGRYNFRGTTLTLNQMLFDGLFTPNEVKRLGYAKLTR
CCCCEEEEECCCCCCCCCCCCCCCCCCEECCCEEEHHHHHHHCCCCHHHHHHHHHHHHHH
YYELQEVSETAALEAVRAYADVVRYRELVDTATQNYVVHKQTTGQVEERSSAGVGRRVDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHCCCCCCEEEH
EQATGRLALAEANLLTELTNLHDVSARYLRIVGEKPPEALPKLPAKFQIGPMPASTEMLM
HHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEECCCCCCHHHHH
KDGLPNSPTINAALENVRSMKTAIASRKAAYMPRVDLRLYDSRDRNLQGVTGTTRVNGIE
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEE
LVLNYNLFRGGADKARERQAVDLHEQARDLKEKACRDVRQTLSIAFSDVRTLNEQLAYRD
EEEEECEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHRLSTEKSREAYLQQFELGQRTLLDLLDSQNEYFQANRSYVNASYDQIIAQARTLAGMG
HHHHCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHH
QLVTALNVKRGDVPSAQDAGQDRTGIDPAELCPQDETVVDTMEKIKAGTVIPPRARATVA
HHHHHHCCCCCCCCCCHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEC
PAPGQALPAKISLSADTLFDFDKSTIKAGGTGKLDALVDRLKGVNVDVVIAVGHTDSVGT
CCCCCCCCCEEEECHHHHHHCCHHHCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCC
DAYNQRLSLARADSVKAYLVSKGVDRQRIRTEGRGESQPVADNATAEGRAKNRRVDIEVV
HHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
EARPAAK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]