Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ywjB [H]

Identifier: 91786197

GI number: 91786197

Start: 302148

End: 302684

Strand: Direct

Name: ywjB [H]

Synonym: Bpro_0286

Alternate gene names: 91786197

Gene position: 302148-302684 (Clockwise)

Preceding gene: 91786196

Following gene: 91786198

Centisome position: 5.81

GC content: 56.8

Gene sequence:

>537_bases
ATGATCACCACACATGTATTCATCGCCATCAGTTTGGATGGCTTCATCGCTCGGCCCGATGGCGACATCGGCTGGCTTCT
GCAGCGCGATGACCCAACCGAGGATCACGGCTACTCAGATTTCATCGCCGACAAAGACATGATCGTGATGGGTCGGGGGA
GCTATGAAAAGGTTGTGACCTTCGACAAGTGGCCCTACGACCGACCCATCCTCGTGCTGTCTAAACAACTTGCCGGCACG
CTGGTGCCCGAGGCGCTGAAAGGAAAGGTCCGCTTCTCCAATCTCGCGCCAAAGGACGCGTTGGAGGAACTGACTCGGCA
AAACGTGCACCGGGTTTATGTCGATGGCGGGCGGCTGGTGCAGTCGTTCCTGCGCGATGGGCTGATCAATGACATGGTAA
TTACAACTGTTCCTGTTCTGATTGGGTCTGGACGGCCGCTGTTTGGGCCACTGCCGCAGGACATTGATCTGGCACTGGTA
TCTAGCCGCAGCTTCCCTTCAGGTCTGGTGCAATCCACCTATCGGCTGGTCCCATGA

Upstream 100 bases:

>100_bases
CTGTCAGATGAGCGTGGTCGGCGCTTGAAGTGCTGGGGAGCCTTGTGTTCGGGTCGTGTTCGGATGAAAATATATACACT
GTATAAATAATGAGCATCCA

Downstream 100 bases:

>100_bases
CCCGACCGCGTGGTCGTCCAGCCCGAGGGAAGGGAGTGGAGCGCGACGACATCCTGACCGCCGCGCTGACTCTGTTGGAT
GAAGGTGGGGGGCAAGGGTT

Product: bifunctional deaminase-reductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MITTHVFIAISLDGFIARPDGDIGWLLQRDDPTEDHGYSDFIADKDMIVMGRGSYEKVVTFDKWPYDRPILVLSKQLAGT
LVPEALKGKVRFSNLAPKDALEELTRQNVHRVYVDGGRLVQSFLRDGLINDMVITTVPVLIGSGRPLFGPLPQDIDLALV
SSRSFPSGLVQSTYRLVP

Sequences:

>Translated_178_residues
MITTHVFIAISLDGFIARPDGDIGWLLQRDDPTEDHGYSDFIADKDMIVMGRGSYEKVVTFDKWPYDRPILVLSKQLAGT
LVPEALKGKVRFSNLAPKDALEELTRQNVHRVYVDGGRLVQSFLRDGLINDMVITTVPVLIGSGRPLFGPLPQDIDLALV
SSRSFPSGLVQSTYRLVP
>Mature_178_residues
MITTHVFIAISLDGFIARPDGDIGWLLQRDDPTEDHGYSDFIADKDMIVMGRGSYEKVVTFDKWPYDRPILVLSKQLAGT
LVPEALKGKVRFSNLAPKDALEELTRQNVHRVYVDGGRLVQSFLRDGLINDMVITTVPVLIGSGRPLFGPLPQDIDLALV
SSRSFPSGLVQSTYRLVP

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yyaP [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 19769; Mature: 19769

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTHVFIAISLDGFIARPDGDIGWLLQRDDPTEDHGYSDFIADKDMIVMGRGSYEKVVT
CCEEEEEEEEEECCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE
FDKWPYDRPILVLSKQLAGTLVPEALKGKVRFSNLAPKDALEELTRQNVHRVYVDGGRLV
ECCCCCCCCCEEEEHHHHHHHCCHHHCCCEEECCCCCHHHHHHHHHCCCEEEEECCHHHH
QSFLRDGLINDMVITTVPVLIGSGRPLFGPLPQDIDLALVSSRSFPSGLVQSTYRLVP
HHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MITTHVFIAISLDGFIARPDGDIGWLLQRDDPTEDHGYSDFIADKDMIVMGRGSYEKVVT
CCEEEEEEEEEECCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE
FDKWPYDRPILVLSKQLAGTLVPEALKGKVRFSNLAPKDALEELTRQNVHRVYVDGGRLV
ECCCCCCCCCEEEEHHHHHHHCCHHHCCCEEECCCCCHHHHHHHHHCCCEEEEECCHHHH
QSFLRDGLINDMVITTVPVLIGSGRPLFGPLPQDIDLALVSSRSFPSGLVQSTYRLVP
HHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]