| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ywjB [H]
Identifier: 91786197
GI number: 91786197
Start: 302148
End: 302684
Strand: Direct
Name: ywjB [H]
Synonym: Bpro_0286
Alternate gene names: 91786197
Gene position: 302148-302684 (Clockwise)
Preceding gene: 91786196
Following gene: 91786198
Centisome position: 5.81
GC content: 56.8
Gene sequence:
>537_bases ATGATCACCACACATGTATTCATCGCCATCAGTTTGGATGGCTTCATCGCTCGGCCCGATGGCGACATCGGCTGGCTTCT GCAGCGCGATGACCCAACCGAGGATCACGGCTACTCAGATTTCATCGCCGACAAAGACATGATCGTGATGGGTCGGGGGA GCTATGAAAAGGTTGTGACCTTCGACAAGTGGCCCTACGACCGACCCATCCTCGTGCTGTCTAAACAACTTGCCGGCACG CTGGTGCCCGAGGCGCTGAAAGGAAAGGTCCGCTTCTCCAATCTCGCGCCAAAGGACGCGTTGGAGGAACTGACTCGGCA AAACGTGCACCGGGTTTATGTCGATGGCGGGCGGCTGGTGCAGTCGTTCCTGCGCGATGGGCTGATCAATGACATGGTAA TTACAACTGTTCCTGTTCTGATTGGGTCTGGACGGCCGCTGTTTGGGCCACTGCCGCAGGACATTGATCTGGCACTGGTA TCTAGCCGCAGCTTCCCTTCAGGTCTGGTGCAATCCACCTATCGGCTGGTCCCATGA
Upstream 100 bases:
>100_bases CTGTCAGATGAGCGTGGTCGGCGCTTGAAGTGCTGGGGAGCCTTGTGTTCGGGTCGTGTTCGGATGAAAATATATACACT GTATAAATAATGAGCATCCA
Downstream 100 bases:
>100_bases CCCGACCGCGTGGTCGTCCAGCCCGAGGGAAGGGAGTGGAGCGCGACGACATCCTGACCGCCGCGCTGACTCTGTTGGAT GAAGGTGGGGGGCAAGGGTT
Product: bifunctional deaminase-reductase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MITTHVFIAISLDGFIARPDGDIGWLLQRDDPTEDHGYSDFIADKDMIVMGRGSYEKVVTFDKWPYDRPILVLSKQLAGT LVPEALKGKVRFSNLAPKDALEELTRQNVHRVYVDGGRLVQSFLRDGLINDMVITTVPVLIGSGRPLFGPLPQDIDLALV SSRSFPSGLVQSTYRLVP
Sequences:
>Translated_178_residues MITTHVFIAISLDGFIARPDGDIGWLLQRDDPTEDHGYSDFIADKDMIVMGRGSYEKVVTFDKWPYDRPILVLSKQLAGT LVPEALKGKVRFSNLAPKDALEELTRQNVHRVYVDGGRLVQSFLRDGLINDMVITTVPVLIGSGRPLFGPLPQDIDLALV SSRSFPSGLVQSTYRLVP >Mature_178_residues MITTHVFIAISLDGFIARPDGDIGWLLQRDDPTEDHGYSDFIADKDMIVMGRGSYEKVVTFDKWPYDRPILVLSKQLAGT LVPEALKGKVRFSNLAPKDALEELTRQNVHRVYVDGGRLVQSFLRDGLINDMVITTVPVLIGSGRPLFGPLPQDIDLALV SSRSFPSGLVQSTYRLVP
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yyaP [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002734 [H]
Pfam domain/function: PF01872 RibD_C [H]
EC number: NA
Molecular weight: Translated: 19769; Mature: 19769
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITTHVFIAISLDGFIARPDGDIGWLLQRDDPTEDHGYSDFIADKDMIVMGRGSYEKVVT CCEEEEEEEEEECCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE FDKWPYDRPILVLSKQLAGTLVPEALKGKVRFSNLAPKDALEELTRQNVHRVYVDGGRLV ECCCCCCCCCEEEEHHHHHHHCCHHHCCCEEECCCCCHHHHHHHHHCCCEEEEECCHHHH QSFLRDGLINDMVITTVPVLIGSGRPLFGPLPQDIDLALVSSRSFPSGLVQSTYRLVP HHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCC >Mature Secondary Structure MITTHVFIAISLDGFIARPDGDIGWLLQRDDPTEDHGYSDFIADKDMIVMGRGSYEKVVT CCEEEEEEEEEECCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE FDKWPYDRPILVLSKQLAGTLVPEALKGKVRFSNLAPKDALEELTRQNVHRVYVDGGRLV ECCCCCCCCCEEEEHHHHHHHCCHHHCCCEEECCCCCHHHHHHHHHCCCEEEEECCHHHH QSFLRDGLINDMVITTVPVLIGSGRPLFGPLPQDIDLALVSSRSFPSGLVQSTYRLVP HHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]