| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786177
Identifier: 91786177
GI number: 91786177
Start: 284167
End: 284673
Strand: Direct
Name: 91786177
Synonym: Bpro_0266
Alternate gene names: NA
Gene position: 284167-284673 (Clockwise)
Preceding gene: 91786176
Following gene: 91786180
Centisome position: 5.46
GC content: 60.55
Gene sequence:
>507_bases ATGATCAAAGTAGGCGACACCCTTCCGGCAGCGACGCTGATGGAATTTTCCGAAGTCGAAGGCAATGGTTGCAGCATTGG CCCCAACCCGGTCGATGTAGCCAAGGTCACCGCCGGCAAGACCATTGCATTGTTCGCACTGCCAGGTGCTTTCACCCCCA CCTGCTCGGCCAAGCATGTGCCGGGTTATGTTGAGAAGGCGGCCGAGTTCAAGGCCGCTGGCGTCGATGAAATCTGGTGT GTGAGCGTGAACGACGCGTTTGTCATGGGCGCCTGGGCACGCGACCAGAAGACGGACGGCAAGGTTCGCATGCTGGCCGA CGGCAGTGCAGATTTTGCCAAGGCGACCGGTCTGACGCTGGACCTCACGGCGCGCGGCATGGGCCTGCGCAGTAACCGCT ACTCCATGCTGGTCAAAGACGGCAAGGTGATGAGCCTCAACGTTGAAGGTCCCGGCAAGTTTGAAGTCAGCGATGCAGCC ACGCTGCTGGCGCAAGCCAAGGCCTGA
Upstream 100 bases:
>100_bases CAGGCTTTGACTGCAAGTCATCAGAAACGGCTCACAATGTGAGCCGTTTTTGTTTCCGTCCTAGAATCACATCCGTTTTA TACCCAACCAGGAGCACTCC
Downstream 100 bases:
>100_bases CGCTCGCTGATTCCAAAAAAAGCCGCCGTTCGCGAGAACGGCGGCTTTTTTTATGCCTCGCGGGTCGTCCGTGGCAGAGG GACACGGGTTACCGCGCGAT
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MIKVGDTLPAATLMEFSEVEGNGCSIGPNPVDVAKVTAGKTIALFALPGAFTPTCSAKHVPGYVEKAAEFKAAGVDEIWC VSVNDAFVMGAWARDQKTDGKVRMLADGSADFAKATGLTLDLTARGMGLRSNRYSMLVKDGKVMSLNVEGPGKFEVSDAA TLLAQAKA
Sequences:
>Translated_168_residues MIKVGDTLPAATLMEFSEVEGNGCSIGPNPVDVAKVTAGKTIALFALPGAFTPTCSAKHVPGYVEKAAEFKAAGVDEIWC VSVNDAFVMGAWARDQKTDGKVRMLADGSADFAKATGLTLDLTARGMGLRSNRYSMLVKDGKVMSLNVEGPGKFEVSDAA TLLAQAKA >Mature_168_residues MIKVGDTLPAATLMEFSEVEGNGCSIGPNPVDVAKVTAGKTIALFALPGAFTPTCSAKHVPGYVEKAAEFKAAGVDEIWC VSVNDAFVMGAWARDQKTDGKVRMLADGSADFAKATGLTLDLTARGMGLRSNRYSMLVKDGKVMSLNVEGPGKFEVSDAA TLLAQAKA
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=167, Percent_Identity=44.9101796407186, Blast_Score=129, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6323138, Length=156, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=6e-12, Organism=Drosophila melanogaster, GI78706776, Length=153, Percent_Identity=49.0196078431373, Blast_Score=143, Evalue=6e-35, Organism=Drosophila melanogaster, GI78709078, Length=153, Percent_Identity=49.0196078431373, Blast_Score=143, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013740 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17517; Mature: 17517
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKVGDTLPAATLMEFSEVEGNGCSIGPNPVDVAKVTAGKTIALFALPGAFTPTCSAKHV CEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCC PGYVEKAAEFKAAGVDEIWCVSVNDAFVMGAWARDQKTDGKVRMLADGSADFAKATGLTL CHHHHHHHHHCCCCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEECCCCCCHHHCCCEE DLTARGMGLRSNRYSMLVKDGKVMSLNVEGPGKFEVSDAATLLAQAKA EEEECCCCCCCCCEEEEEECCEEEEEEECCCCCEEEHHHHHEEEECCC >Mature Secondary Structure MIKVGDTLPAATLMEFSEVEGNGCSIGPNPVDVAKVTAGKTIALFALPGAFTPTCSAKHV CEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCC PGYVEKAAEFKAAGVDEIWCVSVNDAFVMGAWARDQKTDGKVRMLADGSADFAKATGLTL CHHHHHHHHHCCCCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEECCCCCCHHHCCCEE DLTARGMGLRSNRYSMLVKDGKVMSLNVEGPGKFEVSDAATLLAQAKA EEEECCCCCCCCCEEEEEECCEEEEEEECCCCCEEEHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]