Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786177

Identifier: 91786177

GI number: 91786177

Start: 284167

End: 284673

Strand: Direct

Name: 91786177

Synonym: Bpro_0266

Alternate gene names: NA

Gene position: 284167-284673 (Clockwise)

Preceding gene: 91786176

Following gene: 91786180

Centisome position: 5.46

GC content: 60.55

Gene sequence:

>507_bases
ATGATCAAAGTAGGCGACACCCTTCCGGCAGCGACGCTGATGGAATTTTCCGAAGTCGAAGGCAATGGTTGCAGCATTGG
CCCCAACCCGGTCGATGTAGCCAAGGTCACCGCCGGCAAGACCATTGCATTGTTCGCACTGCCAGGTGCTTTCACCCCCA
CCTGCTCGGCCAAGCATGTGCCGGGTTATGTTGAGAAGGCGGCCGAGTTCAAGGCCGCTGGCGTCGATGAAATCTGGTGT
GTGAGCGTGAACGACGCGTTTGTCATGGGCGCCTGGGCACGCGACCAGAAGACGGACGGCAAGGTTCGCATGCTGGCCGA
CGGCAGTGCAGATTTTGCCAAGGCGACCGGTCTGACGCTGGACCTCACGGCGCGCGGCATGGGCCTGCGCAGTAACCGCT
ACTCCATGCTGGTCAAAGACGGCAAGGTGATGAGCCTCAACGTTGAAGGTCCCGGCAAGTTTGAAGTCAGCGATGCAGCC
ACGCTGCTGGCGCAAGCCAAGGCCTGA

Upstream 100 bases:

>100_bases
CAGGCTTTGACTGCAAGTCATCAGAAACGGCTCACAATGTGAGCCGTTTTTGTTTCCGTCCTAGAATCACATCCGTTTTA
TACCCAACCAGGAGCACTCC

Downstream 100 bases:

>100_bases
CGCTCGCTGATTCCAAAAAAAGCCGCCGTTCGCGAGAACGGCGGCTTTTTTTATGCCTCGCGGGTCGTCCGTGGCAGAGG
GACACGGGTTACCGCGCGAT

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: Thioredoxin reductase [H]

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MIKVGDTLPAATLMEFSEVEGNGCSIGPNPVDVAKVTAGKTIALFALPGAFTPTCSAKHVPGYVEKAAEFKAAGVDEIWC
VSVNDAFVMGAWARDQKTDGKVRMLADGSADFAKATGLTLDLTARGMGLRSNRYSMLVKDGKVMSLNVEGPGKFEVSDAA
TLLAQAKA

Sequences:

>Translated_168_residues
MIKVGDTLPAATLMEFSEVEGNGCSIGPNPVDVAKVTAGKTIALFALPGAFTPTCSAKHVPGYVEKAAEFKAAGVDEIWC
VSVNDAFVMGAWARDQKTDGKVRMLADGSADFAKATGLTLDLTARGMGLRSNRYSMLVKDGKVMSLNVEGPGKFEVSDAA
TLLAQAKA
>Mature_168_residues
MIKVGDTLPAATLMEFSEVEGNGCSIGPNPVDVAKVTAGKTIALFALPGAFTPTCSAKHVPGYVEKAAEFKAAGVDEIWC
VSVNDAFVMGAWARDQKTDGKVRMLADGSADFAKATGLTLDLTARGMGLRSNRYSMLVKDGKVMSLNVEGPGKFEVSDAA
TLLAQAKA

Specific function: Unknown

COG id: COG0678

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI6912238, Length=167, Percent_Identity=44.9101796407186, Blast_Score=129, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6323138, Length=156, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=6e-12,
Organism=Drosophila melanogaster, GI78706776, Length=153, Percent_Identity=49.0196078431373, Blast_Score=143, Evalue=6e-35,
Organism=Drosophila melanogaster, GI78709078, Length=153, Percent_Identity=49.0196078431373, Blast_Score=143, Evalue=6e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17517; Mature: 17517

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVGDTLPAATLMEFSEVEGNGCSIGPNPVDVAKVTAGKTIALFALPGAFTPTCSAKHV
CEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCC
PGYVEKAAEFKAAGVDEIWCVSVNDAFVMGAWARDQKTDGKVRMLADGSADFAKATGLTL
CHHHHHHHHHCCCCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEECCCCCCHHHCCCEE
DLTARGMGLRSNRYSMLVKDGKVMSLNVEGPGKFEVSDAATLLAQAKA
EEEECCCCCCCCCEEEEEECCEEEEEEECCCCCEEEHHHHHEEEECCC
>Mature Secondary Structure
MIKVGDTLPAATLMEFSEVEGNGCSIGPNPVDVAKVTAGKTIALFALPGAFTPTCSAKHV
CEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCC
PGYVEKAAEFKAAGVDEIWCVSVNDAFVMGAWARDQKTDGKVRMLADGSADFAKATGLTL
CHHHHHHHHHCCCCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEECCCCCCHHHCCCEE
DLTARGMGLRSNRYSMLVKDGKVMSLNVEGPGKFEVSDAATLLAQAKA
EEEECCCCCCCCCEEEEEECCEEEEEEECCCCCEEEHHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]