| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786109
Identifier: 91786109
GI number: 91786109
Start: 216307
End: 217293
Strand: Reverse
Name: 91786109
Synonym: Bpro_0198
Alternate gene names: NA
Gene position: 217293-216307 (Counterclockwise)
Preceding gene: 91786110
Following gene: 91786108
Centisome position: 4.18
GC content: 66.87
Gene sequence:
>987_bases ATGAACATCTCACGCCGCCAGCTCATCCAGTCTTCCAGCGCCGCCGCCCTGCTCGCCGGCATCGGCCAGCAGGCCTGGGC CCAGGCCCTTGACAGCACCAAGGTGATCGCCGGCTTTGCGCCCGGCGGCACCGCCGACATCGTGTCGCGCCGCGTGGCCG ACAAGCTGCACCCCGGCTATGCCAAAAGCGCGGTGGTGGAAAACAAGACCGGCGCGGGCGGCCAGATCGCGGTGCAGTTT GTCAAGAACGCCGCGCCCGATGGCGCCACCATGCTGCTGACGCCGATGTCCATGCTGGGCATTTACCCGCACACCTACAA AAAGCTGCCCTACGACCCGGTGGCCGACTTGACGCCGGTGTCGGCTGCGGCTGTGTTTGACTATGGCTTTGCCGTGGGTC CCATGGTGCCGGCCAGCGTGAAAACCGTGCCCGAGTTCCTGGCCTGGTGCAAGGCCAACCCAACCCTGGCCAACTTCGGC TCGCCCGCCGCCGGCTCGTCGCCGCACTTCATCGGCGCCCTGCTGGGCCGCGCCGCGAACGTCGATTTGCGCCATGTGGC GTTTCGCGGCACGCAGCCTGCGGTGCTGGACATGATTGGCGGTCAGATCGCCGCCGTGTCCGGACCGACCGGCGAGTTCA CCCAGCATGTGGCGGCTGGCAAATGCCGCCTGCTCTCCACCAGCGGCCCCAGGCGCGGCAAGTTCACGCCCAATACGCCG ACGCTGCTGGAGCAGGGCTTCAAGGACATGGCGTTCACCGAATGGTTTGGTTTCTTCCTGCCCGCCAAGGCGCCGCAGGA CGTGGTGCAGCGCTTGAATAGCGCGATCCGTGCGGCACTGGCGTCGCAGGACGTGATTGACGGCTTGGCGGTGTCTTACC TGGAAGTGATGCCCACATCGCCCGCCCAGCTGGCCGCCATGCTGAAGGCCGACACCGAACTCTGGGGCCCGCTGGTGAAA GCCATTGGGTTCACGCCGGAAGGCTAG
Upstream 100 bases:
>100_bases ACCCGCCCAGGGCTGAACAACATCCGAACAACCTGCCCGCTTGCCATGGACAATATCTGCGGGTTCACCAACGATTACAT CGACTTTTCGAGGACACACC
Downstream 100 bases:
>100_bases AGATGTGGCCCCCACGGTCGTTCACCGCGTGTAACTCCCTGCCCCCCGAGGGGGCTGAACTTGCTTGGGGCGGCCCGGCG CTGCGTTCGTTGGCCCCCAC
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MNISRRQLIQSSSAAALLAGIGQQAWAQALDSTKVIAGFAPGGTADIVSRRVADKLHPGYAKSAVVENKTGAGGQIAVQF VKNAAPDGATMLLTPMSMLGIYPHTYKKLPYDPVADLTPVSAAAVFDYGFAVGPMVPASVKTVPEFLAWCKANPTLANFG SPAAGSSPHFIGALLGRAANVDLRHVAFRGTQPAVLDMIGGQIAAVSGPTGEFTQHVAAGKCRLLSTSGPRRGKFTPNTP TLLEQGFKDMAFTEWFGFFLPAKAPQDVVQRLNSAIRAALASQDVIDGLAVSYLEVMPTSPAQLAAMLKADTELWGPLVK AIGFTPEG
Sequences:
>Translated_328_residues MNISRRQLIQSSSAAALLAGIGQQAWAQALDSTKVIAGFAPGGTADIVSRRVADKLHPGYAKSAVVENKTGAGGQIAVQF VKNAAPDGATMLLTPMSMLGIYPHTYKKLPYDPVADLTPVSAAAVFDYGFAVGPMVPASVKTVPEFLAWCKANPTLANFG SPAAGSSPHFIGALLGRAANVDLRHVAFRGTQPAVLDMIGGQIAAVSGPTGEFTQHVAAGKCRLLSTSGPRRGKFTPNTP TLLEQGFKDMAFTEWFGFFLPAKAPQDVVQRLNSAIRAALASQDVIDGLAVSYLEVMPTSPAQLAAMLKADTELWGPLVK AIGFTPEG >Mature_328_residues MNISRRQLIQSSSAAALLAGIGQQAWAQALDSTKVIAGFAPGGTADIVSRRVADKLHPGYAKSAVVENKTGAGGQIAVQF VKNAAPDGATMLLTPMSMLGIYPHTYKKLPYDPVADLTPVSAAAVFDYGFAVGPMVPASVKTVPEFLAWCKANPTLANFG SPAAGSSPHFIGALLGRAANVDLRHVAFRGTQPAVLDMIGGQIAAVSGPTGEFTQHVAAGKCRLLSTSGPRRGKFTPNTP TLLEQGFKDMAFTEWFGFFLPAKAPQDVVQRLNSAIRAALASQDVIDGLAVSYLEVMPTSPAQLAAMLKADTELWGPLVK AIGFTPEG
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34262; Mature: 34262
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISRRQLIQSSSAAALLAGIGQQAWAQALDSTKVIAGFAPGGTADIVSRRVADKLHPGY CCCHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCH AKSAVVENKTGAGGQIAVQFVKNAAPDGATMLLTPMSMLGIYPHTYKKLPYDPVADLTPV HHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHCCCHHHHCCCCCCCCCCCCC SAAAVFDYGFAVGPMVPASVKTVPEFLAWCKANPTLANFGSPAAGSSPHFIGALLGRAAN HHHHHHHHCCHHCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHHCC VDLRHVAFRGTQPAVLDMIGGQIAAVSGPTGEFTQHVAAGKCRLLSTSGPRRGKFTPNTP CCHHHEEECCCCCHHHHHHCCEEEEECCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCH TLLEQGFKDMAFTEWFGFFLPAKAPQDVVQRLNSAIRAALASQDVIDGLAVSYLEVMPTS HHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAQLAAMLKADTELWGPLVKAIGFTPEG HHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNISRRQLIQSSSAAALLAGIGQQAWAQALDSTKVIAGFAPGGTADIVSRRVADKLHPGY CCCHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCH AKSAVVENKTGAGGQIAVQFVKNAAPDGATMLLTPMSMLGIYPHTYKKLPYDPVADLTPV HHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHCCCHHHHCCCCCCCCCCCCC SAAAVFDYGFAVGPMVPASVKTVPEFLAWCKANPTLANFGSPAAGSSPHFIGALLGRAAN HHHHHHHHCCHHCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHHCC VDLRHVAFRGTQPAVLDMIGGQIAAVSGPTGEFTQHVAAGKCRLLSTSGPRRGKFTPNTP CCHHHEEECCCCCHHHHHHCCEEEEECCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCH TLLEQGFKDMAFTEWFGFFLPAKAPQDVVQRLNSAIRAALASQDVIDGLAVSYLEVMPTS HHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAQLAAMLKADTELWGPLVKAIGFTPEG HHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]