| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is glnB [H]
Identifier: 91786094
GI number: 91786094
Start: 198738
End: 199076
Strand: Direct
Name: glnB [H]
Synonym: Bpro_0183
Alternate gene names: 91786094
Gene position: 198738-199076 (Clockwise)
Preceding gene: 91786093
Following gene: 91786095
Centisome position: 3.82
GC content: 56.34
Gene sequence:
>339_bases ATGAAACTCGTAACGGCCATCATCAAACCGTTCAAGCTGGATGAGGTGCGTGAAGCACTCTCCGGCATTGGCGTGCAAGG CATCACGGTGACTGAAGTCAAAGGCTTCGGCCGTCAAAAAGGCCACACTGAACTGTACCGCGGTGCAGAGTATGTGGTCG ACTTTCTGCCCAAGGTCAAAATTGAAGCGGCAGTGTCTGACGATCTGGTGGATCGCGTGATTGAGGCGGTTGAGGGTGCT GCCCGCACCGGCAAGATCGGCGACGGCAAGGTCTTTGTCTATAACCTCGAGCAGGTTGTGCGCATCCGCACCGGTGAAAC CGGCAAGGAAGCGCTCTGA
Upstream 100 bases:
>100_bases ACAAGGGCACCCTGGTTGTGACGCTGACCAAAACCCTGTAAAGCGGCAGAAGCGGCGCTCTGCATGGGCCGCTTCCCTAT TCATCCTGGAGGAACCTGAA
Downstream 100 bases:
>100_bases CGCGCGGTTCAACCCTAGAAAAAAGAGAACATCGACATGAAAAAATTTCTTGCTTCCCTTGTATTGGGATTGAGTCTGCT GGGAACTGGCGCAGCCGTCA
Product: nitrogen regulatory protein P-II
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKLVTAIIKPFKLDEVREALSGIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIEAAVSDDLVDRVIEAVEGA ARTGKIGDGKVFVYNLEQVVRIRTGETGKEAL
Sequences:
>Translated_112_residues MKLVTAIIKPFKLDEVREALSGIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIEAAVSDDLVDRVIEAVEGA ARTGKIGDGKVFVYNLEQVVRIRTGETGKEAL >Mature_112_residues MKLVTAIIKPFKLDEVREALSGIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIEAAVSDDLVDRVIEAVEGA ARTGKIGDGKVFVYNLEQVVRIRTGETGKEAL
Specific function: In nitrogen-limiting conditions, when the ratio of Gln to 2-ketoglutarate decreases, P-II is uridylylated to P-II-UMP. P- II-UMP allows the deadenylation of glutamine synthetase (GS), thus activating the enzyme. Conversely, in nitrogen excess P-II is deur
COG id: COG0347
COG function: function code E; Nitrogen regulatory protein PII
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P(II) protein family [H]
Homologues:
Organism=Escherichia coli, GI1786655, Length=112, Percent_Identity=72.3214285714286, Blast_Score=166, Evalue=5e-43, Organism=Escherichia coli, GI1788904, Length=112, Percent_Identity=66.9642857142857, Blast_Score=157, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002187 - InterPro: IPR011322 - InterPro: IPR015867 - InterPro: IPR017918 [H]
Pfam domain/function: PF00543 P-II [H]
EC number: NA
Molecular weight: Translated: 12203; Mature: 12203
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS00496 PII_GLNB_UMP ; PS00638 PII_GLNB_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVTAIIKPFKLDEVREALSGIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK CCHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCE IEAAVSDDLVDRVIEAVEGAARTGKIGDGKVFVYNLEQVVRIRTGETGKEAL EHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEEEHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKLVTAIIKPFKLDEVREALSGIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK CCHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCE IEAAVSDDLVDRVIEAVEGAARTGKIGDGKVFVYNLEQVVRIRTGETGKEAL EHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEEEHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA