| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91786063
Identifier: 91786063
GI number: 91786063
Start: 162162
End: 162713
Strand: Reverse
Name: 91786063
Synonym: Bpro_0152
Alternate gene names: NA
Gene position: 162713-162162 (Counterclockwise)
Preceding gene: 91786066
Following gene: 91786059
Centisome position: 3.13
GC content: 62.5
Gene sequence:
>552_bases ATGAAAAACACAACGTCATACCTTGGCGCCTGGCTTGGAGCAGCAAGCCTGGCCTTTGCTTTTGCGCTTGTGGCACCCAA CGAATCCAGCGTGATGGGCCGCTTGCCGGCCTTCATGACGCATACGCTGCTGCAGCAACCCGTAGCAGTGCCGGATGGGC TACCCTCTGAGCGCACGCTGGCGCTGATCACCTTCCAGCGGGACCAGCGCGGCCAGGCTGAGAGCTGGATCCAGGGACTC AATTTGCAGAACGACCCGTCCATTGCCTGGATGCGCATGCCCGTTCTCCATGACCCTGGAACGCCGACAGGCCGCAGTGC GATTGAAAACAAGTTGCGGCAGCACTACACCGCCGATACCGAGCGGGCCCGGCTGGTGCCGGTGTTCACCGACCGTGCCA GCTTCGTGCGGGCCGCAGGCCTGAATGGCGTAGAGCAGGCCTATGCCGTGGTCATCAACCGCCAGGGAGACGTACTGGCC AGGGTCGAGGGACAGTTTGATCCCGACAAGGCCCAGACCCTGCGTGAGACGCTGCTGACGCATGGCCTTTAA
Upstream 100 bases:
>100_bases GCAAAGCCTGCGTTTGGATGTAAGTTGCACTCAGGGATGGATCGAGGTCCAGGGCAGCATTCATTTTTTGCGCGGGACTG ACTCCCCCAGGGAGCGCGTC
Downstream 100 bases:
>100_bases CTTTGAGCCCCCTGCGGCGCCGGCCGCGGGCCCGTCCGCTCAAAGTCGCGCAGCGCCCAGCGTGAAGTAAAACGTGGCGC CGCGGCCAAGGGCGGCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKNTTSYLGAWLGAASLAFAFALVAPNESSVMGRLPAFMTHTLLQQPVAVPDGLPSERTLALITFQRDQRGQAESWIQGL NLQNDPSIAWMRMPVLHDPGTPTGRSAIENKLRQHYTADTERARLVPVFTDRASFVRAAGLNGVEQAYAVVINRQGDVLA RVEGQFDPDKAQTLRETLLTHGL
Sequences:
>Translated_183_residues MKNTTSYLGAWLGAASLAFAFALVAPNESSVMGRLPAFMTHTLLQQPVAVPDGLPSERTLALITFQRDQRGQAESWIQGL NLQNDPSIAWMRMPVLHDPGTPTGRSAIENKLRQHYTADTERARLVPVFTDRASFVRAAGLNGVEQAYAVVINRQGDVLA RVEGQFDPDKAQTLRETLLTHGL >Mature_183_residues MKNTTSYLGAWLGAASLAFAFALVAPNESSVMGRLPAFMTHTLLQQPVAVPDGLPSERTLALITFQRDQRGQAESWIQGL NLQNDPSIAWMRMPVLHDPGTPTGRSAIENKLRQHYTADTERARLVPVFTDRASFVRAAGLNGVEQAYAVVINRQGDVLA RVEGQFDPDKAQTLRETLLTHGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20081; Mature: 20081
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTTSYLGAWLGAASLAFAFALVAPNESSVMGRLPAFMTHTLLQQPVAVPDGLPSERTL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE ALITFQRDQRGQAESWIQGLNLQNDPSIAWMRMPVLHDPGTPTGRSAIENKLRQHYTADT EEEEECCCCCCCHHHHHHCCCCCCCCCEEEEEECEEECCCCCCCHHHHHHHHHHHCCCCC ERARLVPVFTDRASFVRAAGLNGVEQAYAVVINRQGDVLARVEGQFDPDKAQTLRETLLT CCCEEEEEECCHHHHHHHHCCCCHHHHHEEEECCCCCEEEEECCCCCCHHHHHHHHHHHH HGL CCC >Mature Secondary Structure MKNTTSYLGAWLGAASLAFAFALVAPNESSVMGRLPAFMTHTLLQQPVAVPDGLPSERTL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE ALITFQRDQRGQAESWIQGLNLQNDPSIAWMRMPVLHDPGTPTGRSAIENKLRQHYTADT EEEEECCCCCCCHHHHHHCCCCCCCCCEEEEEECEEECCCCCCCHHHHHHHHHHHCCCCC ERARLVPVFTDRASFVRAAGLNGVEQAYAVVINRQGDVLARVEGQFDPDKAQTLRETLLT CCCEEEEEECCHHHHHHHHCCCCHHHHHEEEECCCCCEEEEECCCCCCHHHHHHHHHHHH HGL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA