| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786021
Identifier: 91786021
GI number: 91786021
Start: 112569
End: 113006
Strand: Reverse
Name: 91786021
Synonym: Bpro_0110
Alternate gene names: NA
Gene position: 113006-112569 (Counterclockwise)
Preceding gene: 91786022
Following gene: 91786020
Centisome position: 2.17
GC content: 61.87
Gene sequence:
>438_bases GTGATCTATCTTTCCATCAAGGCTTTTCACATCGTCGCCGTCGTGACCTGGATCGGCGGGATGTTGACACTGTCCCTGGT GCTGGGGTCGCTGGCCCACGCAACGCTGCCACGCGAGGCGAACGAGCACCGTTTGCTGGTCGCCATCCATCGATGGGACC GCAAAGTCACAACACCCGCATTGGGGCTGGTCTGGCTTTTGGGCATCACGCTGGCGGTCATGAGTGGCTGGTATAGCGCG CCATGGCTGTGGGCCAAGCTGGCAGGGGTCGTCCTGCTGTCCGCGCTGCACGGCAACCAGTCGGCCACCATCAGGCGCAT GAGCGGTGATTCAGCGCTGCAAGCACCCGGCTATATGCGCTTGACAGCCGGCTTCACGGTCGCAGCCATCACCGCCATCA TTCTTCTGGTCACCCTTAAACCGCCGGGTGCTCTTTAG
Upstream 100 bases:
>100_bases ATTGCCCCGCACGCCTTGCCTGCAAACAAATCCTGGTGACCTGGTGACCTGGTAACCTGGTGACTGAAGGCCCCGAAAGC ACACAAGGCGGCAGTTCGCG
Downstream 100 bases:
>100_bases CGTCGGCTGGCTTGTCTGTTGACGGCCAAAAAACGGCCGCTCAAACGGCCGCTCAAGTGGTCGTTCACGCAGTGGCCAGG CACTTCTGATCCAGCTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MIYLSIKAFHIVAVVTWIGGMLTLSLVLGSLAHATLPREANEHRLLVAIHRWDRKVTTPALGLVWLLGITLAVMSGWYSA PWLWAKLAGVVLLSALHGNQSATIRRMSGDSALQAPGYMRLTAGFTVAAITAIILLVTLKPPGAL
Sequences:
>Translated_145_residues MIYLSIKAFHIVAVVTWIGGMLTLSLVLGSLAHATLPREANEHRLLVAIHRWDRKVTTPALGLVWLLGITLAVMSGWYSA PWLWAKLAGVVLLSALHGNQSATIRRMSGDSALQAPGYMRLTAGFTVAAITAIILLVTLKPPGAL >Mature_145_residues MIYLSIKAFHIVAVVTWIGGMLTLSLVLGSLAHATLPREANEHRLLVAIHRWDRKVTTPALGLVWLLGITLAVMSGWYSA PWLWAKLAGVVLLSALHGNQSATIRRMSGDSALQAPGYMRLTAGFTVAAITAIILLVTLKPPGAL
Specific function: Unknown
COG id: COG1981
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15575; Mature: 15575
Theoretical pI: Translated: 11.21; Mature: 11.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYLSIKAFHIVAVVTWIGGMLTLSLVLGSLAHATLPREANEHRLLVAIHRWDRKVTTPA CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHH LGLVWLLGITLAVMSGWYSAPWLWAKLAGVVLLSALHGNQSATIRRMSGDSALQAPGYMR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEE LTAGFTVAAITAIILLVTLKPPGAL EECCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIYLSIKAFHIVAVVTWIGGMLTLSLVLGSLAHATLPREANEHRLLVAIHRWDRKVTTPA CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHH LGLVWLLGITLAVMSGWYSAPWLWAKLAGVVLLSALHGNQSATIRRMSGDSALQAPGYMR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEE LTAGFTVAAITAIILLVTLKPPGAL EECCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA