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The map label for this gene is yiaN [C]

Identifier: 91786003

GI number: 91786003

Start: 93350

End: 94690

Strand: Direct

Name: yiaN [C]

Synonym: Bpro_0090

Alternate gene names: 91786003

Gene position: 93350-94690 (Clockwise)

Preceding gene: 91786002

Following gene: 91786004

Centisome position: 1.8

GC content: 65.1

Gene sequence:

>1341_bases
ATGCCCATCACACTATTGACTTCGATGGTGCTCGCGTTTGCGCTGAGCATTTCCATTTCCGTGGCCATAGGCGGCTCGGC
CATGCTGGGCCTGGCGCTGTTCGACATGGACAAGCTGGTGCTCGCGCCCAAGGAGATGTTTGCCGCGATCGACAAGTTTC
CGCTCGCGGCCGTGCCGTTCTTCATCCTGGCGGGCAACCTGATGGAGACCGGCGGCATCTCGCGGCGGCTGGTCGAATTC
GCCAAGTCGCTGGTCGGTGGCGTGCAGGGCGGCCTGCCGATGACCTGCGTGCTCACCTGCATGATCTTTGCCGCGGTGTC
GGGCTCCTCGGTGGCCACCACCTTCGCCATCGGCTCCATCCTGATTCCCGCGCTGATCAAGCACGGCTACCCGACCAGCT
ACGCCGCCGCGCTGCAGGCGACCTCGGCCGAGCTCGGCGTGATCATTCCGCCGTCCATCCCGATGATCCTGTTCGGCGTG
TCGGCCGAGGTGTCCATCGGCGAACTGTTTATCGCCGGCTTCGGCCCGGGCCTGCTGATCGGCGGCGCGCTGATGCTGTT
TGTGCACCTGTATTGCCGCTTCAAGGGCTGGGGCAAGCGCGATGGCGACGGCCGGCTGCCGGTGCGCATCGCCACGGCCA
AGGCCGGCTGGGCGCTGCTGATGCCGGTGATCATCCTGGGGGGCATCTACGGCGGCATTTTCACGCCCACCGAGGCGTCG
GTGGTGGCGGTGTTCTATGCGCTGACGGTGGGGCTGTTCATTCACCGCGAACTGGAGCTCAAGGACCTGGTTCCGGTCTT
TCGCAAGTCGCTGATCTCCAGCGCGGTGATCATGTTCATCATCGCCAACGCCGGGCTGTTCGCCTTCCTGATCACGCGCG
CCGGTGTGCCGGAAGCGCTGGGCACCTGGCTGACCGAGGTGTTGAAGTCGCCCACGTGGTTTCTGCTGGGCGTGAACGCG
GCGCTGTTCGTCATCGGCATGTTCATTGAGACCTCCGCCGCCATCATCGTGCTGGCGCCTATCCTGGTGCCTGTGGCGCG
TCACTTCGGCGTCGACCCGGTGCACTTCGGCACCATCATGGTGGTCAACCTCGCGCTGGGAATGATCACGCCGCCGTTTG
GCGTGAACCTGTTCGCCGCCTGCACGGTGGCCAGGATTTCACTCGACCAGATCGTCAGGCACCTGGTGCCCTTCGTGCTC
GTGATCGTCGGTTGCCTGATGGTCGTCACCTATGTGCCCAGCATCAGCCTGGCGCTGCGCGACCTGGTCTATCCGCCGAA
GGTCGCCAGCGTGGCCCCATCGCCTTCTCCATGGGTCGCGCCGGCCCCCGCGTCGAATTGA

Upstream 100 bases:

>100_bases
GCGCCGCCCTGAGCGTGCTGGCCGTGCTCGCGCAGCACATCGATCCGATGAACGAAGAACTCGAGAACGCCCAGTAGGCA
GCAGGAAGCAGTAAGCCGTC

Downstream 100 bases:

>100_bases
TGCGGACCGCGTCCCCATTCTTGATTTTGGAAACCACACCATGAAGTCAATCGAGCCACAGCTCAACCTCATCGCCGGCG
AACGCTGCGCCGCCACATCC

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MPITLLTSMVLAFALSISISVAIGGSAMLGLALFDMDKLVLAPKEMFAAIDKFPLAAVPFFILAGNLMETGGISRRLVEF
AKSLVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGSILIPALIKHGYPTSYAAALQATSAELGVIIPPSIPMILFGV
SAEVSIGELFIAGFGPGLLIGGALMLFVHLYCRFKGWGKRDGDGRLPVRIATAKAGWALLMPVIILGGIYGGIFTPTEAS
VVAVFYALTVGLFIHRELELKDLVPVFRKSLISSAVIMFIIANAGLFAFLITRAGVPEALGTWLTEVLKSPTWFLLGVNA
ALFVIGMFIETSAAIIVLAPILVPVARHFGVDPVHFGTIMVVNLALGMITPPFGVNLFAACTVARISLDQIVRHLVPFVL
VIVGCLMVVTYVPSISLALRDLVYPPKVASVAPSPSPWVAPAPASN

Sequences:

>Translated_446_residues
MPITLLTSMVLAFALSISISVAIGGSAMLGLALFDMDKLVLAPKEMFAAIDKFPLAAVPFFILAGNLMETGGISRRLVEF
AKSLVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGSILIPALIKHGYPTSYAAALQATSAELGVIIPPSIPMILFGV
SAEVSIGELFIAGFGPGLLIGGALMLFVHLYCRFKGWGKRDGDGRLPVRIATAKAGWALLMPVIILGGIYGGIFTPTEAS
VVAVFYALTVGLFIHRELELKDLVPVFRKSLISSAVIMFIIANAGLFAFLITRAGVPEALGTWLTEVLKSPTWFLLGVNA
ALFVIGMFIETSAAIIVLAPILVPVARHFGVDPVHFGTIMVVNLALGMITPPFGVNLFAACTVARISLDQIVRHLVPFVL
VIVGCLMVVTYVPSISLALRDLVYPPKVASVAPSPSPWVAPAPASN
>Mature_445_residues
PITLLTSMVLAFALSISISVAIGGSAMLGLALFDMDKLVLAPKEMFAAIDKFPLAAVPFFILAGNLMETGGISRRLVEFA
KSLVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGSILIPALIKHGYPTSYAAALQATSAELGVIIPPSIPMILFGVS
AEVSIGELFIAGFGPGLLIGGALMLFVHLYCRFKGWGKRDGDGRLPVRIATAKAGWALLMPVIILGGIYGGIFTPTEASV
VAVFYALTVGLFIHRELELKDLVPVFRKSLISSAVIMFIIANAGLFAFLITRAGVPEALGTWLTEVLKSPTWFLLGVNAA
LFVIGMFIETSAAIIVLAPILVPVARHFGVDPVHFGTIMVVNLALGMITPPFGVNLFAACTVARISLDQIVRHLVPFVLV
IVGCLMVVTYVPSISLALRDLVYPPKVASVAPSPSPWVAPAPASN

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=392, Percent_Identity=36.9897959183673, Blast_Score=219, Evalue=3e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 46806; Mature: 46675

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPITLLTSMVLAFALSISISVAIGGSAMLGLALFDMDKLVLAPKEMFAAIDKFPLAAVPF
CCHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHCCHHHHCCHHHHHHHHHCCCHHHHHH
FILAGNLMETGGISRRLVEFAKSLVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGSI
HHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LIPALIKHGYPTSYAAALQATSAELGVIIPPSIPMILFGVSAEVSIGELFIAGFGPGLLI
HHHHHHHCCCCCHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCHHHEEEECCCCHHHH
GGALMLFVHLYCRFKGWGKRDGDGRLPVRIATAKAGWALLMPVIILGGIYGGIFTPTEAS
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHH
VVAVFYALTVGLFIHRELELKDLVPVFRKSLISSAVIMFIIANAGLFAFLITRAGVPEAL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHH
GTWLTEVLKSPTWFLLGVNAALFVIGMFIETSAAIIVLAPILVPVARHFGVDPVHFGTIM
HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VVNLALGMITPPFGVNLFAACTVARISLDQIVRHLVPFVLVIVGCLMVVTYVPSISLALR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
DLVYPPKVASVAPSPSPWVAPAPASN
HHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PITLLTSMVLAFALSISISVAIGGSAMLGLALFDMDKLVLAPKEMFAAIDKFPLAAVPF
CHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHCCHHHHCCHHHHHHHHHCCCHHHHHH
FILAGNLMETGGISRRLVEFAKSLVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGSI
HHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LIPALIKHGYPTSYAAALQATSAELGVIIPPSIPMILFGVSAEVSIGELFIAGFGPGLLI
HHHHHHHCCCCCHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCHHHEEEECCCCHHHH
GGALMLFVHLYCRFKGWGKRDGDGRLPVRIATAKAGWALLMPVIILGGIYGGIFTPTEAS
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHH
VVAVFYALTVGLFIHRELELKDLVPVFRKSLISSAVIMFIIANAGLFAFLITRAGVPEAL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHH
GTWLTEVLKSPTWFLLGVNAALFVIGMFIETSAAIIVLAPILVPVARHFGVDPVHFGTIM
HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VVNLALGMITPPFGVNLFAACTVARISLDQIVRHLVPFVLVIVGCLMVVTYVPSISLALR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
DLVYPPKVASVAPSPSPWVAPAPASN
HHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]