| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91785956
Identifier: 91785956
GI number: 91785956
Start: 45480
End: 45866
Strand: Reverse
Name: 91785956
Synonym: Bpro_0043
Alternate gene names: NA
Gene position: 45866-45480 (Counterclockwise)
Preceding gene: 91785957
Following gene: 91785952
Centisome position: 0.88
GC content: 60.21
Gene sequence:
>387_bases ATGGCCTCTATACGATTCATTCCACTTGCCGCCGCGCTGCTGGTAGCCGGCACCCTGACGGCTTGCAGCTCCGGCCCCGG CATGCGTATGGGCATGGGCGGCCCTGGTCAAACCACCATGGCGCGCATGGACATGCAAATGGGCTCCATGCGCCAGGTCC ACGAAAAAATGATGGCGGCCAAAACGCCCGAGGAACGCCAAAGGCTGGCCGCCGAACACATGAAGTCCATGCACGAAGGC ATGCAGATGATGGACCGCGCACGTGACATGCCGGCCGACCCGGAGGCTCGACATCAGATGATGGAAAAACGCATGGAAAT GATGCAGACCATGATGAAAATGATGATCGACCAGATGCCGGCCGCACCGTCGGCGCCGGCCAAATAA
Upstream 100 bases:
>100_bases GGGCAGTACATTGAATGCAAGCTTGCCGCACTCGCGGGCCGCGTCCTCGGGCCCGGCCATCGGGCGGTGCCTGCCCTGTC TCAACCCACGAAAGCGTCAC
Downstream 100 bases:
>100_bases GGCCCCGCTGCCGAAGCGTCTCGCCGGATATGCGCCCTCAGGCGCTGTCAGGCGTTGACGGAAGAAGGCCCCAGCCCGAT GGGCGCGGGGGTTTTCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MASIRFIPLAAALLVAGTLTACSSGPGMRMGMGGPGQTTMARMDMQMGSMRQVHEKMMAAKTPEERQRLAAEHMKSMHEG MQMMDRARDMPADPEARHQMMEKRMEMMQTMMKMMIDQMPAAPSAPAK
Sequences:
>Translated_128_residues MASIRFIPLAAALLVAGTLTACSSGPGMRMGMGGPGQTTMARMDMQMGSMRQVHEKMMAAKTPEERQRLAAEHMKSMHEG MQMMDRARDMPADPEARHQMMEKRMEMMQTMMKMMIDQMPAAPSAPAK >Mature_127_residues ASIRFIPLAAALLVAGTLTACSSGPGMRMGMGGPGQTTMARMDMQMGSMRQVHEKMMAAKTPEERQRLAAEHMKSMHEGM QMMDRARDMPADPEARHQMMEKRMEMMQTMMKMMIDQMPAAPSAPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14223; Mature: 14092
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 21.1 %Met (Translated Protein) 21.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 20.5 %Met (Mature Protein) 21.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASIRFIPLAAALLVAGTLTACSSGPGMRMGMGGPGQTTMARMDMQMGSMRQVHEKMMAA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC KTPEERQRLAAEHMKSMHEGMQMMDRARDMPADPEARHQMMEKRMEMMQTMMKMMIDQMP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC AAPSAPAK CCCCCCCC >Mature Secondary Structure ASIRFIPLAAALLVAGTLTACSSGPGMRMGMGGPGQTTMARMDMQMGSMRQVHEKMMAA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC KTPEERQRLAAEHMKSMHEGMQMMDRARDMPADPEARHQMMEKRMEMMQTMMKMMIDQMP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC AAPSAPAK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA