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The map label for this gene is rdgC [H]

Identifier: 91785943

GI number: 91785943

Start: 30702

End: 31676

Strand: Direct

Name: rdgC [H]

Synonym: Bpro_0030

Alternate gene names: 91785943

Gene position: 30702-31676 (Clockwise)

Preceding gene: 91785940

Following gene: 91785949

Centisome position: 0.59

GC content: 64.72

Gene sequence:

>975_bases
GTGTTCAAAAACGTGATGGTGTACCGCATCGGGCCCGCGTGGTCGGTTTCTCTGGAGCAGCTCGAAGCAAACCTGCAGGC
CATGCGCTTTGTCGAGTGCGGCCTGACGCAGGAAAAATCCGTCGGCTGGGTCGAGCCGCGCGGTGAGGCAAACGGCCCGC
TGGTCGAGTCGGTGGGCGGCCAGTGGCTGCTCAAGCTGATGCTGGAAAGCAAGGCCGTGCCGGCCTCGGTCATCAACCGC
AAGGCCAAGGAGCGGGTGGCGCAGATTGAAGCTGCCACCGGCCGCAAGCCCGGCAAAAAGGAAACCCGGGATCTCAAGGA
AGAGCTCAAGCTGGACCTGCTGCCGATGGCCTTTACCCGGCAGGGCTCGGTGCAGGTGTGGATAGACCCCGAGGCGCGCC
TGCTGATGATTGACGCGGCCAGCCAGGCCAAGGCCGACGAGGTGCTGACCTGCCTGGCCAAATCGATGGAGGGCCTGGGT
GCCATGCTGCTGCAGACCACGGCTTCGCCGGTGGCCGCCATGTCCGAGTGGCTGGTCAGCCAGGAGCCACCGGCCGGTTT
CAGTGTGGACCGCGAATGCGAGCTCAAGGCTGGCGACGAGTCAAAAGCGGTGGTGCGCTATTCGCGGCACGCGCTCGACA
TCGACGAAGTGCAGCAGCACATCAACCACGGCAAGCTGCCCACGCGGCTGGCCATGACCTGGGAAGGGCGGGTGTCGTTC
ATGCTGACGGATACGCTGCAGATCAAGAAATTGGCGTTTGTTGACGGCGTGTTTGAAGACGATGCCGCTGCCAGCAAGGC
CGACCGGTTTGATGCCGACGCGGCGATTGCCACCGGGGAAATCCGTCGGCTGATTCCCGATTTGCTGGAGGCGCTGGGCG
GCGAACTGGTGATGGGGGCTGACGCGCCTGCGGCATTGGCCCCAGCATTGGCCCCAGCGCTGGCTGCGGCCGAGGCAGAG
TCGCCGCCCTTTTAA

Upstream 100 bases:

>100_bases
GCGGCGCCGCCGTGTCTGGCCGGCGCTGCGCAGGGCGCCGGTCTTCTAGACTCCGTGTCCTTCCCTTTTCAAATCAAATC
AACAGTCAAAAAGGTTTTCC

Downstream 100 bases:

>100_bases
GCGCTCTTCATAAGCTCTCTTAAACCGGCAAGGGCGTGCCGGCCAGCAGTTCTTCAAACAGTGTCTCGCCACCCATCTGC
CCGCCCTTGAGCATGATCTC

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MFKNVMVYRIGPAWSVSLEQLEANLQAMRFVECGLTQEKSVGWVEPRGEANGPLVESVGGQWLLKLMLESKAVPASVINR
KAKERVAQIEAATGRKPGKKETRDLKEELKLDLLPMAFTRQGSVQVWIDPEARLLMIDAASQAKADEVLTCLAKSMEGLG
AMLLQTTASPVAAMSEWLVSQEPPAGFSVDRECELKAGDESKAVVRYSRHALDIDEVQQHINHGKLPTRLAMTWEGRVSF
MLTDTLQIKKLAFVDGVFEDDAAASKADRFDADAAIATGEIRRLIPDLLEALGGELVMGADAPAALAPALAPALAAAEAE
SPPF

Sequences:

>Translated_324_residues
MFKNVMVYRIGPAWSVSLEQLEANLQAMRFVECGLTQEKSVGWVEPRGEANGPLVESVGGQWLLKLMLESKAVPASVINR
KAKERVAQIEAATGRKPGKKETRDLKEELKLDLLPMAFTRQGSVQVWIDPEARLLMIDAASQAKADEVLTCLAKSMEGLG
AMLLQTTASPVAAMSEWLVSQEPPAGFSVDRECELKAGDESKAVVRYSRHALDIDEVQQHINHGKLPTRLAMTWEGRVSF
MLTDTLQIKKLAFVDGVFEDDAAASKADRFDADAAIATGEIRRLIPDLLEALGGELVMGADAPAALAPALAPALAAAEAE
SPPF
>Mature_324_residues
MFKNVMVYRIGPAWSVSLEQLEANLQAMRFVECGLTQEKSVGWVEPRGEANGPLVESVGGQWLLKLMLESKAVPASVINR
KAKERVAQIEAATGRKPGKKETRDLKEELKLDLLPMAFTRQGSVQVWIDPEARLLMIDAASQAKADEVLTCLAKSMEGLG
AMLLQTTASPVAAMSEWLVSQEPPAGFSVDRECELKAGDESKAVVRYSRHALDIDEVQQHINHGKLPTRLAMTWEGRVSF
MLTDTLQIKKLAFVDGVFEDDAAASKADRFDADAAIATGEIRRLIPDLLEALGGELVMGADAPAALAPALAPALAAAEAE
SPPF

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=297, Percent_Identity=35.6902356902357, Blast_Score=185, Evalue=4e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 35077; Mature: 35077

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKNVMVYRIGPAWSVSLEQLEANLQAMRFVECGLTQEKSVGWVEPRGEANGPLVESVGG
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCH
QWLLKLMLESKAVPASVINRKAKERVAQIEAATGRKPGKKETRDLKEELKLDLLPMAFTR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHCCCEEEC
QGSVQVWIDPEARLLMIDAASQAKADEVLTCLAKSMEGLGAMLLQTTASPVAAMSEWLVS
CCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
QEPPAGFSVDRECELKAGDESKAVVRYSRHALDIDEVQQHINHGKLPTRLAMTWEGRVSF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEECCEEEE
MLTDTLQIKKLAFVDGVFEDDAAASKADRFDADAAIATGEIRRLIPDLLEALGGELVMGA
EEECCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC
DAPAALAPALAPALAAAEAESPPF
CCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFKNVMVYRIGPAWSVSLEQLEANLQAMRFVECGLTQEKSVGWVEPRGEANGPLVESVGG
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCH
QWLLKLMLESKAVPASVINRKAKERVAQIEAATGRKPGKKETRDLKEELKLDLLPMAFTR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHCCCEEEC
QGSVQVWIDPEARLLMIDAASQAKADEVLTCLAKSMEGLGAMLLQTTASPVAAMSEWLVS
CCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
QEPPAGFSVDRECELKAGDESKAVVRYSRHALDIDEVQQHINHGKLPTRLAMTWEGRVSF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEECCEEEE
MLTDTLQIKKLAFVDGVFEDDAAASKADRFDADAAIATGEIRRLIPDLLEALGGELVMGA
EEECCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC
DAPAALAPALAPALAAAEAESPPF
CCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA