Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91785936

Identifier: 91785936

GI number: 91785936

Start: 22740

End: 23120

Strand: Direct

Name: 91785936

Synonym: Bpro_0023

Alternate gene names: NA

Gene position: 22740-23120 (Clockwise)

Preceding gene: 91785934

Following gene: 91785940

Centisome position: 0.44

GC content: 70.34

Gene sequence:

>381_bases
ATGCAACCACAGGTGCTGACCGCCGCCATCATGCTTGCCCTCGGCGGCCTTGCCGGGCCTTGGGCGCTTGCACAGACATC
GGCTGATTCGCCGACGCCCATGTCGTCGCCAGAGACGGCCAGGCCGGCAGATTCTGACCTGCAAAATGTCAAGCCCCGAC
CTCCCACCGCAGACCAGGCCGTGCCGCTGAGAAACCCGCTGAACCGCAACCCGGCCCGGCGCATGGCGCCGGTCACCGAC
CCTGTCGCGCCGCCCGACCCGCGTGACTCGTCGGTGCGACCGGCTTTGCCGCCGGGCTACCAGGACGGGCGCGATACGGT
ATTGCCCGCGGCCGGGACAGCACCGCTGCCCACGCCTGGGGCGAGCGCGCCGGTGAAATGA

Upstream 100 bases:

>100_bases
CACGGACATCATCACCACGCCGACTCATGGCGCTGGTAGGCAATCTCTGGCGCGCCGCCCGGATGGGGCGTAAAGTGACT
TGCAACGCAGGAGATTCATC

Downstream 100 bases:

>100_bases
CCCGCCAGCAACGGCTATTTTTGGTGGTTAAGGGCGCTTAACGGGCTCTAAACCTGGAAACAGCAGTTGACCGCATGCAA
ACTTCAGGAAAGCCGCATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MQPQVLTAAIMLALGGLAGPWALAQTSADSPTPMSSPETARPADSDLQNVKPRPPTADQAVPLRNPLNRNPARRMAPVTD
PVAPPDPRDSSVRPALPPGYQDGRDTVLPAAGTAPLPTPGASAPVK

Sequences:

>Translated_126_residues
MQPQVLTAAIMLALGGLAGPWALAQTSADSPTPMSSPETARPADSDLQNVKPRPPTADQAVPLRNPLNRNPARRMAPVTD
PVAPPDPRDSSVRPALPPGYQDGRDTVLPAAGTAPLPTPGASAPVK
>Mature_126_residues
MQPQVLTAAIMLALGGLAGPWALAQTSADSPTPMSSPETARPADSDLQNVKPRPPTADQAVPLRNPLNRNPARRMAPVTD
PVAPPDPRDSSVRPALPPGYQDGRDTVLPAAGTAPLPTPGASAPVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12951; Mature: 12951

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPQVLTAAIMLALGGLAGPWALAQTSADSPTPMSSPETARPADSDLQNVKPRPPTADQA
CCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
VPLRNPLNRNPARRMAPVTDPVAPPDPRDSSVRPALPPGYQDGRDTVLPAAGTAPLPTPG
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
ASAPVK
CCCCCC
>Mature Secondary Structure
MQPQVLTAAIMLALGGLAGPWALAQTSADSPTPMSSPETARPADSDLQNVKPRPPTADQA
CCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
VPLRNPLNRNPARRMAPVTDPVAPPDPRDSSVRPALPPGYQDGRDTVLPAAGTAPLPTPG
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
ASAPVK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA