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The map label for this gene is intZ [H]

Identifier: 91785807

GI number: 91785807

Start: 4888466

End: 4889665

Strand: Reverse

Name: intZ [H]

Synonym: Bxe_A4470

Alternate gene names: 91785807

Gene position: 4889665-4888466 (Counterclockwise)

Preceding gene: 91785808

Following gene: 91785804

Centisome position: 99.87

GC content: 63.67

Gene sequence:

>1200_bases
ATGCCCCGATTAGCCGTCCCCCTCACCGAAGCCCAGATCCGCGCGCTCGAACCGCGCGCCGCCCGTTATTGCGTCGCCGA
CGGCAACGGCCTCGTCATCGAAGTCATGACGACCGGCACCAAGGTCTGGCGTTTCCGCTATTCGCTGGACGGCAAACGTC
AGCCGCTCGCCACCATTGGCGACTACCGGATGATCTCTTTGCGCGTCGCGCGGGCCAAGGCGCAAAAGTATGCGGAGATG
GTCGCGCGAGGTATTTCGCCGGTCGCCACCGCGCGGCGCGATCGCGGCGCGGAAAGCAAAGCCGACGTGCTGCGCGAAGC
AGCCGAGCTTTATCTCGCGACGGAAATGGCGGGCAAGTCGGAGGAATATCGCCGCACCACGCGGCGCGCGCTCGAAAAGG
ACGTGCTGCCCGCCATCGGCCACATGCCGGTCAAAGCCGTTACCGCCGCCGACATCGTGGCGATATGCGACAGAATCAAA
AGCCGCGGTTCGCCGAAAATGGCGCTGCACACGCGCAATGTGGTCAAGCGTCTCTACGAGTACCTGATTGCCCGGCAACT
CGCGGCCGGCAATCCGGCCGAAGTCGTTCCGGCGCGCTCCATCGCCACTTTCGACAGCCGCACCCGCGTGCTCTCGGGCG
ACGAAATCGGCGCCATGTTCCGGTCGATCGACGCGTCGAGCATTCGCCGGCCGCTGAAATTGGCGCTGCATCTGTTGGTG
TTGACGATGGTGCGGAAATCGGACCTGGTCGAATCGACGTGGGCCGAATTCGATCTGGACAAAGCGCTGTGGACAATACC
CGCCGCGCGCCTGAAGAAAGACCGCGATCAGCGCGTGCCTCTTTCGCTTCAGGCAGTTTCCATGCTGCGCGAGCTTCACG
AGACCAGGGCCAGCCGAAACTTCGTATTCCCGAGCGTCAGAGGCGACGACCGGCCCATCGCCAAAAGCACATTGAACCAG
GCCGTCAAGGCGCTCGGCCTCGACGTGGAGCATTTCGTTCTGCATGACTTCCGGCGCACCGCAACGGCGCACTTGCGCGA
GATGACGGCGCACGCAGAGGCGACCGACCGCGGTGCCGAAGAAGTGCCCGAACGTCTCAGGCAAAGCACGAATGCGGAAA
AGGCTGCGGATCAACGTCGGATCATGCAGCGTTGGGCGGATTTCGTCGATGCGCAGATCAAGGACACCCGCAGCGCATGA

Upstream 100 bases:

>100_bases
ATATGAAATCTCGCTTCGTTGACCCAAAAACCGCTAAATCTTTGGTACACAGTGGGCATAGGTTTAAAATCGCCGCTGTC
CGCGTTTCAACGATCCGAGC

Downstream 100 bases:

>100_bases
CCCGCTAGCGCTGACGGGCATGCGTCGTTCTATTCCGCCAGCCGTGGCACCAAGACGATTCTTTGGTACACGAATCACCT
TGGATCGATCCTAACTCTTT

Product: putative phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MPRLAVPLTEAQIRALEPRAARYCVADGNGLVIEVMTTGTKVWRFRYSLDGKRQPLATIGDYRMISLRVARAKAQKYAEM
VARGISPVATARRDRGAESKADVLREAAELYLATEMAGKSEEYRRTTRRALEKDVLPAIGHMPVKAVTAADIVAICDRIK
SRGSPKMALHTRNVVKRLYEYLIARQLAAGNPAEVVPARSIATFDSRTRVLSGDEIGAMFRSIDASSIRRPLKLALHLLV
LTMVRKSDLVESTWAEFDLDKALWTIPAARLKKDRDQRVPLSLQAVSMLRELHETRASRNFVFPSVRGDDRPIAKSTLNQ
AVKALGLDVEHFVLHDFRRTATAHLREMTAHAEATDRGAEEVPERLRQSTNAEKAADQRRIMQRWADFVDAQIKDTRSA

Sequences:

>Translated_399_residues
MPRLAVPLTEAQIRALEPRAARYCVADGNGLVIEVMTTGTKVWRFRYSLDGKRQPLATIGDYRMISLRVARAKAQKYAEM
VARGISPVATARRDRGAESKADVLREAAELYLATEMAGKSEEYRRTTRRALEKDVLPAIGHMPVKAVTAADIVAICDRIK
SRGSPKMALHTRNVVKRLYEYLIARQLAAGNPAEVVPARSIATFDSRTRVLSGDEIGAMFRSIDASSIRRPLKLALHLLV
LTMVRKSDLVESTWAEFDLDKALWTIPAARLKKDRDQRVPLSLQAVSMLRELHETRASRNFVFPSVRGDDRPIAKSTLNQ
AVKALGLDVEHFVLHDFRRTATAHLREMTAHAEATDRGAEEVPERLRQSTNAEKAADQRRIMQRWADFVDAQIKDTRSA
>Mature_398_residues
PRLAVPLTEAQIRALEPRAARYCVADGNGLVIEVMTTGTKVWRFRYSLDGKRQPLATIGDYRMISLRVARAKAQKYAEMV
ARGISPVATARRDRGAESKADVLREAAELYLATEMAGKSEEYRRTTRRALEKDVLPAIGHMPVKAVTAADIVAICDRIKS
RGSPKMALHTRNVVKRLYEYLIARQLAAGNPAEVVPARSIATFDSRTRVLSGDEIGAMFRSIDASSIRRPLKLALHLLVL
TMVRKSDLVESTWAEFDLDKALWTIPAARLKKDRDQRVPLSLQAVSMLRELHETRASRNFVFPSVRGDDRPIAKSTLNQA
VKALGLDVEHFVLHDFRRTATAHLREMTAHAEATDRGAEEVPERLRQSTNAEKAADQRRIMQRWADFVDAQIKDTRSA

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=392, Percent_Identity=31.6326530612245, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1788974, Length=402, Percent_Identity=28.8557213930348, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1788690, Length=401, Percent_Identity=27.1820448877805, Blast_Score=132, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44745; Mature: 44614

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLAVPLTEAQIRALEPRAARYCVADGNGLVIEVMTTGTKVWRFRYSLDGKRQPLATIG
CCCCCCCCCHHHHHHCCCHHHEEEEECCCCEEEEEEECCCEEEEEEECCCCCCCCCHHHC
DYRMISLRVARAKAQKYAEMVARGISPVATARRDRGAESKADVLREAAELYLATEMAGKS
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
EEYRRTTRRALEKDVLPAIGHMPVKAVTAADIVAICDRIKSRGSPKMALHTRNVVKRLYE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YLIARQLAAGNPAEVVPARSIATFDSRTRVLSGDEIGAMFRSIDASSIRRPLKLALHLLV
HHHHHHHHCCCCCHHCCCCHHHHHCCCCCEECCHHHHHHHHHCCHHHHHHHHHHHHHHHH
LTMVRKSDLVESTWAEFDLDKALWTIPAARLKKDRDQRVPLSLQAVSMLRELHETRASRN
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
FVFPSVRGDDRPIAKSTLNQAVKALGLDVEHFVLHDFRRTATAHLREMTAHAEATDRGAE
CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EVPERLRQSTNAEKAADQRRIMQRWADFVDAQIKDTRSA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PRLAVPLTEAQIRALEPRAARYCVADGNGLVIEVMTTGTKVWRFRYSLDGKRQPLATIG
CCCCCCCCHHHHHHCCCHHHEEEEECCCCEEEEEEECCCEEEEEEECCCCCCCCCHHHC
DYRMISLRVARAKAQKYAEMVARGISPVATARRDRGAESKADVLREAAELYLATEMAGKS
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
EEYRRTTRRALEKDVLPAIGHMPVKAVTAADIVAICDRIKSRGSPKMALHTRNVVKRLYE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YLIARQLAAGNPAEVVPARSIATFDSRTRVLSGDEIGAMFRSIDASSIRRPLKLALHLLV
HHHHHHHHCCCCCHHCCCCHHHHHCCCCCEECCHHHHHHHHHCCHHHHHHHHHHHHHHHH
LTMVRKSDLVESTWAEFDLDKALWTIPAARLKKDRDQRVPLSLQAVSMLRELHETRASRN
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
FVFPSVRGDDRPIAKSTLNQAVKALGLDVEHFVLHDFRRTATAHLREMTAHAEATDRGAE
CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EVPERLRQSTNAEKAADQRRIMQRWADFVDAQIKDTRSA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]