| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785749
Identifier: 91785749
GI number: 91785749
Start: 4821820
End: 4822980
Strand: Reverse
Name: 91785749
Synonym: Bxe_A0024
Alternate gene names: NA
Gene position: 4822980-4821820 (Counterclockwise)
Preceding gene: 91785750
Following gene: 91785748
Centisome position: 98.51
GC content: 63.48
Gene sequence:
>1161_bases ATGAAAAAGACAAAGCAATGGGTACGCACCGGCATTGCCGTGGCGTTGATGTGCGGCGCGGGCGCGGCATTCGCGCAGGT GAAAATCGGCGTCACGCTTTCCACGACGGGGCCGGCTGCATCGCTCGGGATTCCTGAAAAGAACACGATTGCGCTGCTGC CGAAAGAGATCGGCGGCAAGACCGTGCAGTACATCATTCTCGACGACGCATCGGACACCGGCAAAGCCGTGCAAAACACG CGCAAGCTGATCGACGAAGATCACGTCGACGCGATCATCGGTTCGACCGTTACGCCGAATTCGCTCGCCATGCTCGACGC CGCTGCCGAAGGCAAGACGCCGGTGATCTCGCTGGCGGCGTCGGCGGCGATCATTTCGCCGATGGACGCGAAGCGCGCAT GGGCCTTCAAACCGCCGCAAAACGACAGCCTGATGGCGGACGCTATCGCCGACTATATGGAGCATCACGGCGTGAAGACG GTGGGCTTCATCGGCTTCGCGGATGCGTACGGGGACGGCTGGAACAACGTCTTCACCGCCGCGGCCGCCGCGCACAACCT GAAGATCGTCTCCAACGAGCGCTTTAACCGCACCGACGCGTCGGTGACGGGTCAGGTGTTGAAGACGATGGGCGCCAATC CCGACGCCGTGCTGATCGCGGGCGCGGGCACGCCGTCGGCTCTGCCGGCCAAGACGCTCAAGGAGCGCGGCTACAAGGGC AAGGTCTACCAGACGCACGGCGTCGCCAATAACGACTTCCTGCGCGTGTGCGGCAAGGACTGCGAAGGCGAATTCCTGCC GGCCGGTCCGATCCTCGTGGCGGACCAGTTGCAGGCATCGAATCCGGTGAAGAAGTCGTCGGAGGCCTATAAGGCGGCGT ATGAGAAAGCGTATGGCGCAGGCTCGGTGGCGACGTTCGGCGGCCACGCGTGGGATGCCGGCCAGATGCTGCAAGCGGCG ATTCCCGTCGCGCTGAAGACGGCGCAGCCGGGTACCGAAGCATTTCGCGTGGCACTGCGCGGCGCACTTGAGAACATCAA GGAGCTGCCGGTCTCGCACGGCATCATGAATACCACGCCGACCGACCACAACGGCCTCGACAAGCGCGCACGCGTGATCG TGCAGATCGTCGACGGCAAGTGGAAGCTGCAGAACGACTAA
Upstream 100 bases:
>100_bases GAAAACCATGCTTGGCACGCCAGAACCCTATAACTAGATTCAGACACCCGGCCCGTGAGCCGATTACAGATACGCGCTTC AAAGCGTTCGGAGACTTGCA
Downstream 100 bases:
>100_bases ATACAAAAGCGGTACGCGCCTCTCGCGCAACGTGCGGCATGTGACGCCGCATTGCCATTCTGTTCGATGACAATGGCATC GACCGCCGCGCCGTGTTCCG
Product: branched chain amino acid ABC transporter periplasmic ligand-binding protein
Products: NA
Alternate protein names: Branched-Chain Amino Acid ABC Transporter; Twin-Arginine Translocation Pathway Signal; Branched-Chain Amino Acid Transporter; Amino Acid ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MKKTKQWVRTGIAVALMCGAGAAFAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIGGKTVQYIILDDASDTGKAVQNT RKLIDEDHVDAIIGSTVTPNSLAMLDAAAEGKTPVISLAASAAIISPMDAKRAWAFKPPQNDSLMADAIADYMEHHGVKT VGFIGFADAYGDGWNNVFTAAAAAHNLKIVSNERFNRTDASVTGQVLKTMGANPDAVLIAGAGTPSALPAKTLKERGYKG KVYQTHGVANNDFLRVCGKDCEGEFLPAGPILVADQLQASNPVKKSSEAYKAAYEKAYGAGSVATFGGHAWDAGQMLQAA IPVALKTAQPGTEAFRVALRGALENIKELPVSHGIMNTTPTDHNGLDKRARVIVQIVDGKWKLQND
Sequences:
>Translated_386_residues MKKTKQWVRTGIAVALMCGAGAAFAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIGGKTVQYIILDDASDTGKAVQNT RKLIDEDHVDAIIGSTVTPNSLAMLDAAAEGKTPVISLAASAAIISPMDAKRAWAFKPPQNDSLMADAIADYMEHHGVKT VGFIGFADAYGDGWNNVFTAAAAAHNLKIVSNERFNRTDASVTGQVLKTMGANPDAVLIAGAGTPSALPAKTLKERGYKG KVYQTHGVANNDFLRVCGKDCEGEFLPAGPILVADQLQASNPVKKSSEAYKAAYEKAYGAGSVATFGGHAWDAGQMLQAA IPVALKTAQPGTEAFRVALRGALENIKELPVSHGIMNTTPTDHNGLDKRARVIVQIVDGKWKLQND >Mature_386_residues MKKTKQWVRTGIAVALMCGAGAAFAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIGGKTVQYIILDDASDTGKAVQNT RKLIDEDHVDAIIGSTVTPNSLAMLDAAAEGKTPVISLAASAAIISPMDAKRAWAFKPPQNDSLMADAIADYMEHHGVKT VGFIGFADAYGDGWNNVFTAAAAAHNLKIVSNERFNRTDASVTGQVLKTMGANPDAVLIAGAGTPSALPAKTLKERGYKG KVYQTHGVANNDFLRVCGKDCEGEFLPAGPILVADQLQASNPVKKSSEAYKAAYEKAYGAGSVATFGGHAWDAGQMLQAA IPVALKTAQPGTEAFRVALRGALENIKELPVSHGIMNTTPTDHNGLDKRARVIVQIVDGKWKLQND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40547; Mature: 40547
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTKQWVRTGIAVALMCGAGAAFAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIGGK CCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEHHCCCC TVQYIILDDASDTGKAVQNTRKLIDEDHVDAIIGSTVTPNSLAMLDAAAEGKTPVISLAA EEEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEH SAAIISPMDAKRAWAFKPPQNDSLMADAIADYMEHHGVKTVGFIGFADAYGDGWNNVFTA HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEHHHCCCCHHHHHHH AAAAHNLKIVSNERFNRTDASVTGQVLKTMGANPDAVLIAGAGTPSALPAKTLKERGYKG HHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCC KVYQTHGVANNDFLRVCGKDCEGEFLPAGPILVADQLQASNPVKKSSEAYKAAYEKAYGA CEEEECCCCCCCHHEECCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCC GSVATFGGHAWDAGQMLQAAIPVALKTAQPGTEAFRVALRGALENIKELPVSHGIMNTTP CCEEECCCCCCCHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCC TDHNGLDKRARVIVQIVDGKWKLQND CCCCCCCHHHEEEEEEECCEEEECCC >Mature Secondary Structure MKKTKQWVRTGIAVALMCGAGAAFAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIGGK CCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEHHCCCC TVQYIILDDASDTGKAVQNTRKLIDEDHVDAIIGSTVTPNSLAMLDAAAEGKTPVISLAA EEEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEH SAAIISPMDAKRAWAFKPPQNDSLMADAIADYMEHHGVKTVGFIGFADAYGDGWNNVFTA HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEHHHCCCCHHHHHHH AAAAHNLKIVSNERFNRTDASVTGQVLKTMGANPDAVLIAGAGTPSALPAKTLKERGYKG HHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCC KVYQTHGVANNDFLRVCGKDCEGEFLPAGPILVADQLQASNPVKKSSEAYKAAYEKAYGA CEEEECCCCCCCHHEECCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCC GSVATFGGHAWDAGQMLQAAIPVALKTAQPGTEAFRVALRGALENIKELPVSHGIMNTTP CCEEECCCCCCCHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCC TDHNGLDKRARVIVQIVDGKWKLQND CCCCCCCHHHEEEEEEECCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA