Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is parB [H]

Identifier: 91785742

GI number: 91785742

Start: 4813412

End: 4814299

Strand: Reverse

Name: parB [H]

Synonym: Bxe_A0031

Alternate gene names: 91785742

Gene position: 4814299-4813412 (Counterclockwise)

Preceding gene: 91785743

Following gene: 91785741

Centisome position: 98.33

GC content: 63.63

Gene sequence:

>888_bases
ATGAACGCAGTAGCGAGAAAGAAGGGATTGGGGCGCGGTCTGGAGGCATTGCTGGGCGGCAGTGCCGACATTACCGAGGC
TGTGGCGATCGAGGGCGCGCCGCACGTGCTGCCGCTCAGCAAGTTGCAGGCGGGCAAATACCAGCCGCGCACGCGTATGG
ACGAAGGCGCGTTGCAGGAGCTGGCGGCCAGCATTCGTGCGCAGGGGTTGATGCAGCCGATTCTCGTGCGCCCCGTGTCC
GCGGACAAGTACGAGATCATTGCCGGCGAGCGGCGTTTTCGCGCGGCACGTCTTGCTGGCCTCGACGAAGTGCCGGTGCT
GGTGAAGAACGTACCGGACCAGGCCGCCGCCGCGATGGCGCTGATCGAGAACATTCAGCGCGAAGATCTGAATCCGCTGG
AAGAAGCACAAGGCATCCAGCGCTTGCTCGACGAATTCAATTTCACGCACGAGCAGGCTGCGGAATCGGTCGGCCGTTCG
CGGTCCGCGGTATCGAATCTGTTGCGCCTGCTCAATCTGGCGTCGCCTGTACAGACCATGCTGCTGGCCGGCGATCTCGA
CATGGGGCATGCGCGCGCGCTGCTGGCGGTCGATGCCGCGACACAGATCACGCTGGCCAACCAGGTCGTCAACAAACGCA
TGTCGGTGCGCGAAACCGAAAAACTGGTAACGACAACGACCAGGACAGTGCCAGCGGTGAAGGCGCGTGCGAATCCGGAC
GGTGGCCGCGATACGCGACGACTCGAAGAAGAGTTGTCGGACTTGCTGGCGGCGACGGTCAAGATCAAACTCGGCCGACG
TGGGCGCGGGCAGGTGCTGGTCGACTTCGGCGATCTGGACGCACTGGAAGGCATTCTGGTGCGATTGCGCGGCAACGCCA
CTGCCTGA

Upstream 100 bases:

>100_bases
CGGCGCGCAGGCATACGTGCAGTTCGGCGCGGAAATGATTGAGCGGGTGCGCGCATTGAATGACGCGCCCCAGGCATCCT
AAGCGGATCGAGGAAGCACG

Downstream 100 bases:

>100_bases
CTGGCGCGGTGAATGTGAGCGGTGTCAAAGTCTTGCGATGAGGCTCTGTGCAGATCGCAAGCTGTTGGCGCGCTATGGGT
GTGCTGGACAGTAGGCGTTG

Product: chromosome segregation DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MNAVARKKGLGRGLEALLGGSADITEAVAIEGAPHVLPLSKLQAGKYQPRTRMDEGALQELAASIRAQGLMQPILVRPVS
ADKYEIIAGERRFRAARLAGLDEVPVLVKNVPDQAAAAMALIENIQREDLNPLEEAQGIQRLLDEFNFTHEQAAESVGRS
RSAVSNLLRLLNLASPVQTMLLAGDLDMGHARALLAVDAATQITLANQVVNKRMSVRETEKLVTTTTRTVPAVKARANPD
GGRDTRRLEEELSDLLAATVKIKLGRRGRGQVLVDFGDLDALEGILVRLRGNATA

Sequences:

>Translated_295_residues
MNAVARKKGLGRGLEALLGGSADITEAVAIEGAPHVLPLSKLQAGKYQPRTRMDEGALQELAASIRAQGLMQPILVRPVS
ADKYEIIAGERRFRAARLAGLDEVPVLVKNVPDQAAAAMALIENIQREDLNPLEEAQGIQRLLDEFNFTHEQAAESVGRS
RSAVSNLLRLLNLASPVQTMLLAGDLDMGHARALLAVDAATQITLANQVVNKRMSVRETEKLVTTTTRTVPAVKARANPD
GGRDTRRLEEELSDLLAATVKIKLGRRGRGQVLVDFGDLDALEGILVRLRGNATA
>Mature_295_residues
MNAVARKKGLGRGLEALLGGSADITEAVAIEGAPHVLPLSKLQAGKYQPRTRMDEGALQELAASIRAQGLMQPILVRPVS
ADKYEIIAGERRFRAARLAGLDEVPVLVKNVPDQAAAAMALIENIQREDLNPLEEAQGIQRLLDEFNFTHEQAAESVGRS
RSAVSNLLRLLNLASPVQTMLLAGDLDMGHARALLAVDAATQITLANQVVNKRMSVRETEKLVTTTTRTVPAVKARANPD
GGRDTRRLEEELSDLLAATVKIKLGRRGRGQVLVDFGDLDALEGILVRLRGNATA

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 31766; Mature: 31766

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVARKKGLGRGLEALLGGSADITEAVAIEGAPHVLPLSKLQAGKYQPRTRMDEGALQE
CCCHHHHHCCCHHHHHHHCCCCCHHHHHEECCCCCCCCHHHHCCCCCCCCCCCCHHHHHH
LAASIRAQGLMQPILVRPVSADKYEIIAGERRFRAARLAGLDEVPVLVKNVPDQAAAAMA
HHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHH
LIENIQREDLNPLEEAQGIQRLLDEFNFTHEQAAESVGRSRSAVSNLLRLLNLASPVQTM
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LLAGDLDMGHARALLAVDAATQITLANQVVNKRMSVRETEKLVTTTTRTVPAVKARANPD
HHHCCCCCCHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCC
GGRDTRRLEEELSDLLAATVKIKLGRRGRGQVLVDFGDLDALEGILVRLRGNATA
CCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCHHHHHHHHEEECCCCCC
>Mature Secondary Structure
MNAVARKKGLGRGLEALLGGSADITEAVAIEGAPHVLPLSKLQAGKYQPRTRMDEGALQE
CCCHHHHHCCCHHHHHHHCCCCCHHHHHEECCCCCCCCHHHHCCCCCCCCCCCCHHHHHH
LAASIRAQGLMQPILVRPVSADKYEIIAGERRFRAARLAGLDEVPVLVKNVPDQAAAAMA
HHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHH
LIENIQREDLNPLEEAQGIQRLLDEFNFTHEQAAESVGRSRSAVSNLLRLLNLASPVQTM
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LLAGDLDMGHARALLAVDAATQITLANQVVNKRMSVRETEKLVTTTTRTVPAVKARANPD
HHHCCCCCCHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCC
GGRDTRRLEEELSDLLAATVKIKLGRRGRGQVLVDFGDLDALEGILVRLRGNATA
CCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]