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The map label for this gene is atpD1 [H]

Identifier: 91785733

GI number: 91785733

Start: 4805371

End: 4806765

Strand: Reverse

Name: atpD1 [H]

Synonym: Bxe_A0040

Alternate gene names: 91785733

Gene position: 4806765-4805371 (Counterclockwise)

Preceding gene: 91785734

Following gene: 91785732

Centisome position: 98.18

GC content: 60.22

Gene sequence:

>1395_bases
ATGAGTACTACTGCTTTGGTAGAAGGCAAGATCGTACAGTGCATCGGCGCGGTGATCGACGTGGAATTCCCGCGTGACCA
CATGCCGAAGATTTACGACGCGCTCATTCTCGAAGGTTCGGAACTGACGCTCGAAGTCCAGCAGCAGCTGGGCGACGGCG
TTGTCCGCACCATCTGTCTGGGTGCATCAGACGGTCTGCGCCGCGGTACGACGGTGAAGAACACCGGCAAGCCGATCAGC
GTGCCGGTCGGCAAGCCAACCCTCGGCCGGATCATGGACGTGCTGGGTCGCCCGATCGACGAAGCCGGCCCGATCAACTC
GGACGTGGTTCGCGGCATTCACCAGAAGGCTCCGGCGTTCGACGAACTGTCGCCGTCGACGGAACTGCTCGAAACCGGCA
TCAAGGTTATCGACCTGATCTGCCCGTTCGCGAAGGGCGGTAAGGTTGGCCTGTTCGGTGGCGCCGGCGTGGGCAAGACC
GTGAACATGATGGAACTGATCAACAACATCGCGAAGGAACACGGTGGTTACTCCGTGTTCGCCGGTGTTGGCGAGCGTAC
CCGTGAAGGGAACGACTTCTATCACGAAATGAAGGACTCGAACGTTCTCGACAAGGTCGCGCTGGTGTACGGCCAGATGA
ACGAGCCGCCGGGCAACCGTCTGCGCGTCGCGCTGACCGGTCTGACGATGGCTGAGCACTTCCGTGACGAAGGTCTCGAC
GTGCTGTTCTTCGTCGACAACATCTACCGTTTCACGCTGGCAGGCACGGAAGTGTCGGCACTGCTCGGCCGTATGCCGTC
GGCAGTGGGTTATCAGCCTACGTTGGCTGAAGAAATGGGTAAGCTGCAAGAGCGTATTACGTCGACCAAGACCGGCTCGA
TCACGTCGGTTCAGGCCGTGTACGTCCCTGCGGATGACTTGACCGACCCGTCGCCGGCTACGACTTTCGGCCACCTGGAC
GCAACCGTCGTGTTGTCGCGTGACATCGCTTCGCTGGGTATCTACCCGGCAGTCGACCCGCTCGATTCGACCTCGCGTCA
GATCGACCCGAACGTGATTGGCGAAGAGCATTACTCGATCACGCGCGGCGTGCAGCAAACGCTGCAGCGCTACAAGGAAC
TGCGCGACATTATCGCGATTCTGGGCATGGACGAACTGGCGCCGGAAGACAAGCTCGCCGTGGCGCGTGCTCGTAAGATC
CAGCGTTTCCTGTCGCAGCCGTTCCACGTCGCTGAAGTGTTCACGGGCTCGCCGGGCAAGTACGTGCCGCTGAAGGAAAC
GATTCGTGGCTTCAAGATGATCGTGGAAGGCGAGTGCGACCACCTGCCGGAACAGGCGTTCTACATGGTCGGCACGATCG
ACGAAGCCTTCGAAAAGGCCAAGAAGATCCAGTAA

Upstream 100 bases:

>100_bases
CCTTGACGGTCGGCACGCCGCTTCGTGTGCGCCTTCGCGGCGCACCCATCGAAACTGCGCCTTTGCGCGAGTGAAGAATT
GAGTATCTAAAGGAAAAGCG

Downstream 100 bases:

>100_bases
AGGTAGGGTGTAACGAAGCGGGCGCCGCTCGCGCTCAATACTACCCAACGGATAGTATTGGGCAAAACCGGCGCCTCTTA
TTACGCTCATCGCCACAGGA

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta 1; F-ATPase subunit beta 1 [H]

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MSTTALVEGKIVQCIGAVIDVEFPRDHMPKIYDALILEGSELTLEVQQQLGDGVVRTICLGASDGLRRGTTVKNTGKPIS
VPVGKPTLGRIMDVLGRPIDEAGPINSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKT
VNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLD
VLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD
ATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRGVQQTLQRYKELRDIIAILGMDELAPEDKLAVARARKI
QRFLSQPFHVAEVFTGSPGKYVPLKETIRGFKMIVEGECDHLPEQAFYMVGTIDEAFEKAKKIQ

Sequences:

>Translated_464_residues
MSTTALVEGKIVQCIGAVIDVEFPRDHMPKIYDALILEGSELTLEVQQQLGDGVVRTICLGASDGLRRGTTVKNTGKPIS
VPVGKPTLGRIMDVLGRPIDEAGPINSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKT
VNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLD
VLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD
ATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRGVQQTLQRYKELRDIIAILGMDELAPEDKLAVARARKI
QRFLSQPFHVAEVFTGSPGKYVPLKETIRGFKMIVEGECDHLPEQAFYMVGTIDEAFEKAKKIQ
>Mature_463_residues
STTALVEGKIVQCIGAVIDVEFPRDHMPKIYDALILEGSELTLEVQQQLGDGVVRTICLGASDGLRRGTTVKNTGKPISV
PVGKPTLGRIMDVLGRPIDEAGPINSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTV
NMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDV
LFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDA
TVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRGVQQTLQRYKELRDIIAILGMDELAPEDKLAVARARKIQ
RFLSQPFHVAEVFTGSPGKYVPLKETIRGFKMIVEGECDHLPEQAFYMVGTIDEAFEKAKKIQ

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=464, Percent_Identity=69.6120689655172, Blast_Score=646, Evalue=0.0,
Organism=Homo sapiens, GI50345984, Length=321, Percent_Identity=26.4797507788162, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI4757810, Length=321, Percent_Identity=26.4797507788162, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI19913424, Length=324, Percent_Identity=27.7777777777778, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI19913428, Length=421, Percent_Identity=25.41567695962, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI19913426, Length=404, Percent_Identity=24.7524752475248, Blast_Score=99, Evalue=6e-21,
Organism=Escherichia coli, GI1790170, Length=460, Percent_Identity=80.8695652173913, Blast_Score=752, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=305, Percent_Identity=31.1475409836066, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1790172, Length=386, Percent_Identity=25.9067357512953, Blast_Score=122, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI25144756, Length=471, Percent_Identity=68.1528662420382, Blast_Score=641, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17565854, Length=319, Percent_Identity=29.4670846394984, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71988080, Length=399, Percent_Identity=24.3107769423559, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71988063, Length=399, Percent_Identity=24.3107769423559, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17510931, Length=359, Percent_Identity=25.9052924791086, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17570191, Length=405, Percent_Identity=23.7037037037037, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71988074, Length=342, Percent_Identity=23.0994152046784, Blast_Score=84, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6322581, Length=457, Percent_Identity=66.3019693654267, Blast_Score=614, Evalue=1e-177,
Organism=Saccharomyces cerevisiae, GI6319603, Length=407, Percent_Identity=25.5528255528256, Blast_Score=114, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6319370, Length=419, Percent_Identity=24.8210023866348, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6320016, Length=230, Percent_Identity=26.5217391304348, Blast_Score=81, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24638766, Length=464, Percent_Identity=68.5344827586207, Blast_Score=638, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=466, Percent_Identity=63.7339055793991, Blast_Score=591, Evalue=1e-169,
Organism=Drosophila melanogaster, GI24583988, Length=359, Percent_Identity=26.7409470752089, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24583986, Length=359, Percent_Identity=26.7409470752089, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24583984, Length=359, Percent_Identity=26.7409470752089, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24583992, Length=329, Percent_Identity=27.9635258358663, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281361666, Length=413, Percent_Identity=25.181598062954, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24646341, Length=413, Percent_Identity=25.181598062954, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI17136796, Length=413, Percent_Identity=25.181598062954, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI20129479, Length=327, Percent_Identity=27.82874617737, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24658560, Length=399, Percent_Identity=24.5614035087719, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24638768, Length=92, Percent_Identity=50, Blast_Score=85, Evalue=9e-17,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 50461; Mature: 50329

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTALVEGKIVQCIGAVIDVEFPRDHMPKIYDALILEGSELTLEVQQQLGDGVVRTICL
CCCCHHHCCHHHHHHHHHHCCCCCCHHCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHC
GASDGLRRGTTVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPINSDVVRGIHQKAPAF
CCCCCCCCCCEECCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
DELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVF
CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
AGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLD
ECCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHCCCE
VLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAV
EEEEECCCEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEE
YVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSI
EECCCCCCCCCCCCEECCCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
TRGVQQTLQRYKELRDIIAILGMDELAPEDKLAVARARKIQRFLSQPFHVAEVFTGSPGK
HHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEHHEECCCCC
YVPLKETIRGFKMIVEGECDHLPEQAFYMVGTIDEAFEKAKKIQ
CCCHHHHHHHHHEEECCCCCCCCHHHEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STTALVEGKIVQCIGAVIDVEFPRDHMPKIYDALILEGSELTLEVQQQLGDGVVRTICL
CCCHHHCCHHHHHHHHHHCCCCCCHHCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHC
GASDGLRRGTTVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPINSDVVRGIHQKAPAF
CCCCCCCCCCEECCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
DELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVF
CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
AGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLD
ECCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHCCCE
VLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAV
EEEEECCCEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEE
YVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSI
EECCCCCCCCCCCCEECCCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
TRGVQQTLQRYKELRDIIAILGMDELAPEDKLAVARARKIQRFLSQPFHVAEVFTGSPGK
HHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEHHEECCCCC
YVPLKETIRGFKMIVEGECDHLPEQAFYMVGTIDEAFEKAKKIQ
CCCHHHHHHHHHEEECCCCCCCCHHHEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA