| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yajO [H]
Identifier: 91785673
GI number: 91785673
Start: 4730384
End: 4731325
Strand: Reverse
Name: yajO [H]
Synonym: Bxe_A0104
Alternate gene names: 91785673
Gene position: 4731325-4730384 (Counterclockwise)
Preceding gene: 91785685
Following gene: 91785672
Centisome position: 96.64
GC content: 60.72
Gene sequence:
>942_bases ATGCAAAAGCGCAGGATTGGGCGTTCGCAATTACAGGTCGCGCCGCTTATGTTCGGCGGCAATGTTTTCGGCTGGACCGC CGATGAAGCCACCTCGTTTTCGATTCTGGATGCGTTTGTCGATGCCGGTCTCGACTTTATCGATACTGCCGATGTCTATT CCGCATGGGTGCCGGGCAACCAGGGCGGAGAGTCGGAAACCATCATCGGCAAATGGCTCCGCCGGAGCGGCAAACGCGAC AAGATCGTGCTCGCGACCAAAGTCTCGAAGCTTCCGCAGCGCAAGGGGCTGTCGGCCGCGAACATTCAGGCGGCTCTCGA TGATTCATTGCGGCGCTTGCAGACCGATTACATCGACGTCTACTTTTCCCACGACGACGACACCGGAACGCCGCTTGCCG AAACGCTCGGCGCGTATCAGAAACTGATCGAGGCGGGCAAGGTGCGGGTGATCGGCGCGTCGAACTACAGTGGCGCGCGT GTCGAGGAAGCGCTCGCGGTGTCCCGTCAGCACGGACTACCTGAATATCAGCTGTTGCAGCCGGAATACAATCTGTATGA CCGCGCGGAATATGAGCGCGACATCGAACCGGTGGCGCTCGCCAATCAGCTCGGCGTAGTGGTGTATTACAGTCTTGCGA GCGGCTTTCTGTCCGGTAAATACCGCTCGAAAGCGGATCTCGCCAACAAGGCGCGCGGTAGCCGCGTCGAAAAGTACCTG AACGAACGCGGTTTGCGGATTCTCGCCGCGTTGGACCGGGTCGCCGACGCGCACGGCAGTACGCCGGCCACGGTCGCCCT GGCATGGCTGATCGCACGGTCCAGTGTTACGGCCCCGATTGCTAGCGCAACGTCGGTCGACCAGCTCGAAAGCCTCGCGG CCGCCGTACATTTAATGCTGACGGGCGCCGATATCCGCGAACTGGACGAAGCTAGCGCCTGA
Upstream 100 bases:
>100_bases GGCGCTGTGCGGCGCTGGAACCCTTGCTCCGCAGACCCACTGCAGGTATTGAAAAGACGGCGTATTCTCTTTTTCTCTTG TGACAAACCCTGGAGAAATC
Downstream 100 bases:
>100_bases GCGCAAACGGCCTGGCGCAATCGCTAAACCCCTGGTAGGATGGAGAGTTTCCTGATATCATCGGGAGTGAATTGAGATCT TTGCCTGTTTCGTCAACGCT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MQKRRIGRSQLQVAPLMFGGNVFGWTADEATSFSILDAFVDAGLDFIDTADVYSAWVPGNQGGESETIIGKWLRRSGKRD KIVLATKVSKLPQRKGLSAANIQAALDDSLRRLQTDYIDVYFSHDDDTGTPLAETLGAYQKLIEAGKVRVIGASNYSGAR VEEALAVSRQHGLPEYQLLQPEYNLYDRAEYERDIEPVALANQLGVVVYYSLASGFLSGKYRSKADLANKARGSRVEKYL NERGLRILAALDRVADAHGSTPATVALAWLIARSSVTAPIASATSVDQLESLAAAVHLMLTGADIRELDEASA
Sequences:
>Translated_313_residues MQKRRIGRSQLQVAPLMFGGNVFGWTADEATSFSILDAFVDAGLDFIDTADVYSAWVPGNQGGESETIIGKWLRRSGKRD KIVLATKVSKLPQRKGLSAANIQAALDDSLRRLQTDYIDVYFSHDDDTGTPLAETLGAYQKLIEAGKVRVIGASNYSGAR VEEALAVSRQHGLPEYQLLQPEYNLYDRAEYERDIEPVALANQLGVVVYYSLASGFLSGKYRSKADLANKARGSRVEKYL NERGLRILAALDRVADAHGSTPATVALAWLIARSSVTAPIASATSVDQLESLAAAVHLMLTGADIRELDEASA >Mature_313_residues MQKRRIGRSQLQVAPLMFGGNVFGWTADEATSFSILDAFVDAGLDFIDTADVYSAWVPGNQGGESETIIGKWLRRSGKRD KIVLATKVSKLPQRKGLSAANIQAALDDSLRRLQTDYIDVYFSHDDDTGTPLAETLGAYQKLIEAGKVRVIGASNYSGAR VEEALAVSRQHGLPEYQLLQPEYNLYDRAEYERDIEPVALANQLGVVVYYSLASGFLSGKYRSKADLANKARGSRVEKYL NERGLRILAALDRVADAHGSTPATVALAWLIARSSVTAPIASATSVDQLESLAAAVHLMLTGADIRELDEASA
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=323, Percent_Identity=30.3405572755418, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI4504825, Length=320, Percent_Identity=30.3125, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI27436964, Length=325, Percent_Identity=28.6153846153846, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI27436966, Length=324, Percent_Identity=27.7777777777778, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI27436962, Length=324, Percent_Identity=27.7777777777778, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI27436971, Length=323, Percent_Identity=28.7925696594427, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI41327764, Length=277, Percent_Identity=30.3249097472924, Blast_Score=91, Evalue=9e-19, Organism=Homo sapiens, GI223718702, Length=299, Percent_Identity=29.4314381270903, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI41152114, Length=299, Percent_Identity=29.0969899665552, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI223718708, Length=168, Percent_Identity=33.9285714285714, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI87081735, Length=322, Percent_Identity=35.7142857142857, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI1789199, Length=338, Percent_Identity=33.1360946745562, Blast_Score=152, Evalue=2e-38, Organism=Escherichia coli, GI1789375, Length=328, Percent_Identity=29.5731707317073, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1788070, Length=341, Percent_Identity=29.6187683284457, Blast_Score=121, Evalue=6e-29, Organism=Escherichia coli, GI1788081, Length=281, Percent_Identity=30.9608540925267, Blast_Score=96, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6323998, Length=323, Percent_Identity=28.4829721362229, Blast_Score=122, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6319958, Length=303, Percent_Identity=27.7227722772277, Blast_Score=117, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6325169, Length=337, Percent_Identity=27.893175074184, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6319951, Length=323, Percent_Identity=25.3869969040248, Blast_Score=107, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6322615, Length=248, Percent_Identity=25.8064516129032, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6321052, Length=155, Percent_Identity=31.6129032258064, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24640980, Length=346, Percent_Identity=26.0115606936416, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI45549126, Length=346, Percent_Identity=26.0115606936416, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24646155, Length=265, Percent_Identity=27.9245283018868, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24644950, Length=312, Percent_Identity=25.6410256410256, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 33996; Mature: 33996
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKRRIGRSQLQVAPLMFGGNVFGWTADEATSFSILDAFVDAGLDFIDTADVYSAWVPGN CCCCCCCHHHHEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCHHCCHHHHHCCCCCC QGGESETIIGKWLRRSGKRDKIVLATKVSKLPQRKGLSAANIQAALDDSLRRLQTDYIDV CCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEE YFSHDDDTGTPLAETLGAYQKLIEAGKVRVIGASNYSGARVEEALAVSRQHGLPEYQLLQ EEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEC PEYNLYDRAEYERDIEPVALANQLGVVVYYSLASGFLSGKYRSKADLANKARGSRVEKYL CCCCCHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH NERGLRILAALDRVADAHGSTPATVALAWLIARSSVTAPIASATSVDQLESLAAAVHLML HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH TGADIRELDEASA CCCHHHHHHCCCC >Mature Secondary Structure MQKRRIGRSQLQVAPLMFGGNVFGWTADEATSFSILDAFVDAGLDFIDTADVYSAWVPGN CCCCCCCHHHHEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCHHCCHHHHHCCCCCC QGGESETIIGKWLRRSGKRDKIVLATKVSKLPQRKGLSAANIQAALDDSLRRLQTDYIDV CCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEE YFSHDDDTGTPLAETLGAYQKLIEAGKVRVIGASNYSGARVEEALAVSRQHGLPEYQLLQ EEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEC PEYNLYDRAEYERDIEPVALANQLGVVVYYSLASGFLSGKYRSKADLANKARGSRVEKYL CCCCCHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH NERGLRILAALDRVADAHGSTPATVALAWLIARSSVTAPIASATSVDQLESLAAAVHLML HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH TGADIRELDEASA CCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]