Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is 91785649

Identifier: 91785649

GI number: 91785649

Start: 4707186

End: 4708481

Strand: Reverse

Name: 91785649

Synonym: Bxe_A0128

Alternate gene names: NA

Gene position: 4708481-4707186 (Counterclockwise)

Preceding gene: 91785650

Following gene: 91785647

Centisome position: 96.17

GC content: 65.12

Gene sequence:

>1296_bases
ATGCGAACCAGGCATATTGCTGTGAAGCTCAAGGGTTGGATGCAGGCCGTCGCGGCTGTGGCGCTGCTCTCGGCACTCGT
TGCGTGCGGCGGTGGTGGCGGCAGTTCCAACGATTCGTCGGCCACGCTGAACGGCGGCTCGCTGCCGGCCAGCCCGACCC
AGCAGCCGATCGCCGCGACCGCGGCCAATACTGTGCCGATCACGGTCGGCCAGGGCGTGGGCGGGGTCGTCAACATTCCG
ACGGTCAGCGTGACCGTCTGCGCGCCCGGCTCGAACTCGAATTGCCAGACGATCGACAACATCCAGGTCGATACCGGCTC
GTTCGGGTTGCGCGTGGTCGGGTCGGTTTTGAACGCCTCGGTGCTCGGTGCGTTGCCTGTCAGCACTGTCAGCGGCAGCG
GCGCGCAACTCGCCGAATGCGCGACTTTCGCGGACGGCTTCACGTGGGGCACGGTGCGCACCGCGACCATCGCGATAGGC
AGTGAAAGAACGACGGCGGCGATTCCGCTGCAGATCATCGGCGACAAGGACGCCAGCACGGTGCCCACACGCGGTTGCGG
CAGCGGCTCGGCGCAGAACACGGTCAGCGATCTCGGCGCCAACGGCATTCTCGGCATCGGCACGTCGCCCACGGATTGCG
GTGGCACCTGCGCGAACGCGGCAACCGCCATGAATTACAGCAACTACTTCGCGTGTCCGGGCGGCGTCTCCTGTACCCGC
ACGCCGGTGCCGCTCGCCCAGCAGGTGGCCAATCCGGTCGTCAATTTCCCGGCCGACAACAACGGCGTGATCGTGCAGAT
GCCGCCGGTGCCGAATACCGGCGCGCCGTCCGCCACCGGCACATTGGTGTTCGGCATCGGCACGCAGTCGAACAATGCGC
TCACCGGGGTCCAGATCTTTACCACCGACACCTTCGGCGATCTGAACAGCAGCGTGTTCAACGGCACGACGGTGCAGGCG
TTCCTCGATTCGGGCTCGAACGGCTACTTCTTTACCGATAACTCCATCACGCTGTGCGGCAGCAACTTCGCGGGCTTTTA
CTGCCCGTCGTCCGCGCAAACCCGGTCGGTGACGCTGGTCGGATCGAACAATAACCAGACAACCGCCAGCATCGGCATCC
TGAGTGCGGCGACGCTGTTCGGCAACGGCGGCAACTATGCGTTCAATGATCTCGCCGGACAGATCGGCGGCAGCGGCAGC
TTTGACCTCGGCCTGCCGTTCTTCTACGGCCGGCACGTGTACTACGGCTTCGATCAGACCGCAAACGGCGGACAGGCGCC
TTACGTGGCCTTCTGA

Upstream 100 bases:

>100_bases
CGGCGGCCATATGGGCGCGTTCAGCGGCCAGGCGTGGTTGCCCCCGGCGCTGCCCGCCGGCGTCAGCGGTTCCGACATCC
AGTAATCGCGAGGGCGAAAC

Downstream 100 bases:

>100_bases
TCGAGGCGCGGCACTGAAGGGGGAGGCCGCTCCGGCGTCCGCGCGTGACTGCGTGGAGCCGGGGCCGACCTCGCATCGCC
GCATCGGCCGAGACCGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MRTRHIAVKLKGWMQAVAAVALLSALVACGGGGGSSNDSSATLNGGSLPASPTQQPIAATAANTVPITVGQGVGGVVNIP
TVSVTVCAPGSNSNCQTIDNIQVDTGSFGLRVVGSVLNASVLGALPVSTVSGSGAQLAECATFADGFTWGTVRTATIAIG
SERTTAAIPLQIIGDKDASTVPTRGCGSGSAQNTVSDLGANGILGIGTSPTDCGGTCANAATAMNYSNYFACPGGVSCTR
TPVPLAQQVANPVVNFPADNNGVIVQMPPVPNTGAPSATGTLVFGIGTQSNNALTGVQIFTTDTFGDLNSSVFNGTTVQA
FLDSGSNGYFFTDNSITLCGSNFAGFYCPSSAQTRSVTLVGSNNNQTTASIGILSAATLFGNGGNYAFNDLAGQIGGSGS
FDLGLPFFYGRHVYYGFDQTANGGQAPYVAF

Sequences:

>Translated_431_residues
MRTRHIAVKLKGWMQAVAAVALLSALVACGGGGGSSNDSSATLNGGSLPASPTQQPIAATAANTVPITVGQGVGGVVNIP
TVSVTVCAPGSNSNCQTIDNIQVDTGSFGLRVVGSVLNASVLGALPVSTVSGSGAQLAECATFADGFTWGTVRTATIAIG
SERTTAAIPLQIIGDKDASTVPTRGCGSGSAQNTVSDLGANGILGIGTSPTDCGGTCANAATAMNYSNYFACPGGVSCTR
TPVPLAQQVANPVVNFPADNNGVIVQMPPVPNTGAPSATGTLVFGIGTQSNNALTGVQIFTTDTFGDLNSSVFNGTTVQA
FLDSGSNGYFFTDNSITLCGSNFAGFYCPSSAQTRSVTLVGSNNNQTTASIGILSAATLFGNGGNYAFNDLAGQIGGSGS
FDLGLPFFYGRHVYYGFDQTANGGQAPYVAF
>Mature_431_residues
MRTRHIAVKLKGWMQAVAAVALLSALVACGGGGGSSNDSSATLNGGSLPASPTQQPIAATAANTVPITVGQGVGGVVNIP
TVSVTVCAPGSNSNCQTIDNIQVDTGSFGLRVVGSVLNASVLGALPVSTVSGSGAQLAECATFADGFTWGTVRTATIAIG
SERTTAAIPLQIIGDKDASTVPTRGCGSGSAQNTVSDLGANGILGIGTSPTDCGGTCANAATAMNYSNYFACPGGVSCTR
TPVPLAQQVANPVVNFPADNNGVIVQMPPVPNTGAPSATGTLVFGIGTQSNNALTGVQIFTTDTFGDLNSSVFNGTTVQA
FLDSGSNGYFFTDNSITLCGSNFAGFYCPSSAQTRSVTLVGSNNNQTTASIGILSAATLFGNGGNYAFNDLAGQIGGSGS
FDLGLPFFYGRHVYYGFDQTANGGQAPYVAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43035; Mature: 43035

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRHIAVKLKGWMQAVAAVALLSALVACGGGGGSSNDSSATLNGGSLPASPTQQPIAAT
CCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEE
AANTVPITVGQGVGGVVNIPTVSVTVCAPGSNSNCQTIDNIQVDTGSFGLRVVGSVLNAS
CCCEEEEEECCCCCCEEECCEEEEEEECCCCCCCCEEECEEEEECCCCHHHHHHHHHHHH
VLGALPVSTVSGSGAQLAECATFADGFTWGTVRTATIAIGSERTTAAIPLQIIGDKDAST
HHCCCCEEECCCCCCHHHHHHHHCCCCEECCEEEEEEEECCCCCEEEEEEEEECCCCCCC
VPTRGCGSGSAQNTVSDLGANGILGIGTSPTDCGGTCANAATAMNYSNYFACPGGVSCTR
CCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHCHHHEECCCCEEECCCCCCCCC
TPVPLAQQVANPVVNFPADNNGVIVQMPPVPNTGAPSATGTLVFGIGTQSNNALTGVQIF
CCCHHHHHHCCCEEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEE
TTDTFGDLNSSVFNGTTVQAFLDSGSNGYFFTDNSITLCGSNFAGFYCPSSAQTRSVTLV
EECCCCCCCCHHCCCCEEEEEEECCCCCEEEECCEEEEECCCCCCEECCCCCCCEEEEEE
GSNNNQTTASIGILSAATLFGNGGNYAFNDLAGQIGGSGSFDLGLPFFYGRHVYYGFDQT
ECCCCCEEEEEEEEEEEEEECCCCCEEHHHHHHHCCCCCCCCCCCCCEECCEEEECCCCC
ANGGQAPYVAF
CCCCCCCEEEC
>Mature Secondary Structure
MRTRHIAVKLKGWMQAVAAVALLSALVACGGGGGSSNDSSATLNGGSLPASPTQQPIAAT
CCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEE
AANTVPITVGQGVGGVVNIPTVSVTVCAPGSNSNCQTIDNIQVDTGSFGLRVVGSVLNAS
CCCEEEEEECCCCCCEEECCEEEEEEECCCCCCCCEEECEEEEECCCCHHHHHHHHHHHH
VLGALPVSTVSGSGAQLAECATFADGFTWGTVRTATIAIGSERTTAAIPLQIIGDKDAST
HHCCCCEEECCCCCCHHHHHHHHCCCCEECCEEEEEEEECCCCCEEEEEEEEECCCCCCC
VPTRGCGSGSAQNTVSDLGANGILGIGTSPTDCGGTCANAATAMNYSNYFACPGGVSCTR
CCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHCHHHEECCCCEEECCCCCCCCC
TPVPLAQQVANPVVNFPADNNGVIVQMPPVPNTGAPSATGTLVFGIGTQSNNALTGVQIF
CCCHHHHHHCCCEEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEE
TTDTFGDLNSSVFNGTTVQAFLDSGSNGYFFTDNSITLCGSNFAGFYCPSSAQTRSVTLV
EECCCCCCCCHHCCCCEEEEEEECCCCCEEEECCEEEEECCCCCCEECCCCCCCEEEEEE
GSNNNQTTASIGILSAATLFGNGGNYAFNDLAGQIGGSGSFDLGLPFFYGRHVYYGFDQT
ECCCCCEEEEEEEEEEEEEECCCCCEEHHHHHHHCCCCCCCCCCCCCEECCEEEECCCCC
ANGGQAPYVAF
CCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA