| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is flgB [H]
Identifier: 91785637
GI number: 91785637
Start: 4695267
End: 4695761
Strand: Reverse
Name: flgB [H]
Synonym: Bxe_A0140
Alternate gene names: 91785637
Gene position: 4695761-4695267 (Counterclockwise)
Preceding gene: 91785643
Following gene: 91785636
Centisome position: 95.91
GC content: 65.86
Gene sequence:
>495_bases ATGCTGGACAAACTCGATGCCGAATTCGCCTTTGGCCGTCAAGCGCTCGATGTGCGCGCTTACCGGCAGGAGCTGCTGTC GTCGAATATCGCCAATGCCGATACCCCCGGGTACAAGGCGCGCGACGTCGACTTCGCCTCGTCGCTCGCCGGCGCGCTGA AGAAGGCCGGCGGCAGCGCCGGCACCGCTGCGTCGAACAGCTCGACGCTGGCCATGACGCAGCCCGCGGGCGTGACGGGC GGTATGTCGATGGTGTCGACCGCGCCGGGCCACATGGCCGGCAAGTCGACGCTGACGCCGACCGGCGGTGCGCCCGACGA CTACGGCAATCTGCAATACCGCGTGCCGACGCAACCCGCGCTCGACGGCAACACGGTCGACATCGACACAGAGCGGGTGC AGTTCGCGGACAACACCTTGCACTTCGAATCGGGCATGACGGTGTTGTCCAGCCAGATCAAAACGATGCTGTCGGCGATC CAGTCGGGCTCGTAA
Upstream 100 bases:
>100_bases GCCCATAAGATGCACCTCATGCAAAAAGGTCTTCCCGCCTGGCGCAGTCTTCATGCGAGGCGCGCATGGGAAGCCTCGGG AACCTTCTCCGGAGATTCTT
Downstream 100 bases:
>100_bases GAAGCCACGGCGACAGACTCGGCAGTACGCAGGAACAATCGCTACGGGATTAACGTGAAGCCGGCTCAACCCGTGCAACC GCGTTGCACGGGACCGGAGT
Product: flagellar basal body rod protein FlgB
Products: NA
Alternate protein names: Putative proximal rod protein [H]
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MLDKLDAEFAFGRQALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKAGGSAGTAASNSSTLAMTQPAGVTG GMSMVSTAPGHMAGKSTLTPTGGAPDDYGNLQYRVPTQPALDGNTVDIDTERVQFADNTLHFESGMTVLSSQIKTMLSAI QSGS
Sequences:
>Translated_164_residues MLDKLDAEFAFGRQALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKAGGSAGTAASNSSTLAMTQPAGVTG GMSMVSTAPGHMAGKSTLTPTGGAPDDYGNLQYRVPTQPALDGNTVDIDTERVQFADNTLHFESGMTVLSSQIKTMLSAI QSGS >Mature_164_residues MLDKLDAEFAFGRQALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKAGGSAGTAASNSSTLAMTQPAGVTG GMSMVSTAPGHMAGKSTLTPTGGAPDDYGNLQYRVPTQPALDGNTVDIDTERVQFADNTLHFESGMTVLSSQIKTMLSAI QSGS
Specific function: Unknown
COG id: COG1815
COG function: function code N; Flagellar basal body protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787313, Length=164, Percent_Identity=44.5121951219512, Blast_Score=143, Evalue=7e-36,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR006300 [H]
Pfam domain/function: PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 16953; Mature: 16953
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKLDAEFAFGRQALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKAGGSA CCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC GTAASNSSTLAMTQPAGVTGGMSMVSTAPGHMAGKSTLTPTGGAPDDYGNLQYRVPTQPA CCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC LDGNTVDIDTERVQFADNTLHFESGMTVLSSQIKTMLSAIQSGS CCCCEEECCHHHEEECCCEEECHHCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLDKLDAEFAFGRQALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKAGGSA CCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC GTAASNSSTLAMTQPAGVTGGMSMVSTAPGHMAGKSTLTPTGGAPDDYGNLQYRVPTQPA CCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC LDGNTVDIDTERVQFADNTLHFESGMTVLSSQIKTMLSAIQSGS CCCCEEECCHHHEEECCCEEECHHCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]