Click here to switch to the map view.

The map label for this gene is sspB [H]

Identifier: 91785361

GI number: 91785361

Start: 4423225

End: 4423734

Strand: Reverse

Name: sspB [H]

Synonym: Bxe_A0418

Alternate gene names: 91785361

Gene position: 4423734-4423225 (Counterclockwise)

Preceding gene: 91785362

Following gene: 91785360

Centisome position: 90.36

GC content: 63.33

Gene sequence:

>510_bases
ATGCAAGAGATTTCCACCAAGCCTTACCTGCTGCGCGCGCTCTATGAGTGGTGCACGGATAACGGTTATACGCCGCACAT
CGCGGTCCGGGTCGACAATCAGACGCGCGTGCCGCGTCAGTTTGTGCGCGACAACGAAATCGTGTTGAACATCAGCTTCG
AGGCGACCAGCCAGCTGCAGATGGGCAACGAGTGGGTCGAGTTCAGCGCGCGTTTCTCCGGCAAGTCGCACAAGATCGAG
GTGCCGATCGCCAATATTCTCGCGATTTACGCGCGTGAAAACGGCCAGGGTATGGCGTTCCCGGTCGAGTCAGCGGGCGG
TGAAGCGCAGGACTCGGGCGCCGACGCGGAAGTGACCGAAGAGACGGACCCGCCCGCGCCGCGTGCGGTCGAAACGGCGC
CGGCCACGGACGCCGCCACCGCTAAAGCGGATAGCTCGACCGGCGGCCCGCAGCCCGACGACGACGGATCGAAAGGTGGC
GGAAGGGCTCGCCTCAAGATCGTAAAATGA

Upstream 100 bases:

>100_bases
ACGCCTTCGGAAAAGGTGATGCGTCGTTGAGTTTGGCTTTGGGGTAAGGGCGCCGCGCGGCTGACTGGGCGCGGGCCCGC
GCCCGGCAAGAGGACTGTTG

Downstream 100 bases:

>100_bases
AGTAGAATCACGGCCTCATGCCGGCTTAGCTCATCAGGTAGAGCGCTTGACTTGTAATCATGAGGTGGCGGGTTCGAGTC
CTGCAGCCGGCACCAGTTGT

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNQTRVPRQFVRDNEIVLNISFEATSQLQMGNEWVEFSARFSGKSHKIE
VPIANILAIYARENGQGMAFPVESAGGEAQDSGADAEVTEETDPPAPRAVETAPATDAATAKADSSTGGPQPDDDGSKGG
GRARLKIVK

Sequences:

>Translated_169_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNQTRVPRQFVRDNEIVLNISFEATSQLQMGNEWVEFSARFSGKSHKIE
VPIANILAIYARENGQGMAFPVESAGGEAQDSGADAEVTEETDPPAPRAVETAPATDAATAKADSSTGGPQPDDDGSKGG
GRARLKIVK
>Mature_169_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNQTRVPRQFVRDNEIVLNISFEATSQLQMGNEWVEFSARFSGKSHKIE
VPIANILAIYARENGQGMAFPVESAGGEAQDSGADAEVTEETDPPAPRAVETAPATDAATAKADSSTGGPQPDDDGSKGG
GRARLKIVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=118, Percent_Identity=44.9152542372881, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 18237; Mature: 18237

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNQTRVPRQFVRDNEIVLNISFEATSQLQ
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCEEEEEEECCCCCCCC
MGNEWVEFSARFSGKSHKIEVPIANILAIYARENGQGMAFPVESAGGEAQDSGADAEVTE
CCCCEEEEEEEECCCCCEEEECHHHEEEEEECCCCCEEEEEHHCCCCCCCCCCCCCEECC
ETDPPAPRAVETAPATDAATAKADSSTGGPQPDDDGSKGGGRARLKIVK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNQTRVPRQFVRDNEIVLNISFEATSQLQ
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCEEEEEEECCCCCCCC
MGNEWVEFSARFSGKSHKIEVPIANILAIYARENGQGMAFPVESAGGEAQDSGADAEVTE
CCCCEEEEEEEECCCCCEEEECHHHEEEEEECCCCCEEEEEHHCCCCCCCCCCCCCEECC
ETDPPAPRAVETAPATDAATAKADSSTGGPQPDDDGSKGGGRARLKIVK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]