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The map label for this gene is visC [H]

Identifier: 91785327

GI number: 91785327

Start: 4387382

End: 4388554

Strand: Reverse

Name: visC [H]

Synonym: Bxe_A0452

Alternate gene names: 91785327

Gene position: 4388554-4387382 (Counterclockwise)

Preceding gene: 91785328

Following gene: 91785326

Centisome position: 89.64

GC content: 68.97

Gene sequence:

>1173_bases
ATGAACGCACACCACCAGACCTTTGACGCGGCCGTGATCGGCGGCGGGCTCGTCGGCAAGACCGCGGCGCTCGCGCTCAC
GCAAGGCGGACTGCGCGTGGCGCTGCTCGCGCAACCTTGCGCGCCGCTGCCTCCCGGCGCCAGCTTCGACTCGCGCGTCT
ACGCGCTGTCGTCGAGCTCACAGGCTCTGCTGGAGCGTTTGCGGGTCTGGCAGGCGCTCGATCTGACGCGGCTCGGGCCC
GTCTACGACATGCGCGTCTATGGCGATGCGCACGCCGAGCTGCATTTCTCCGCGTTCCAGGCTTCCGTGCCGCAACTGGC
GTGGATCGTCGAGTCGTCGGTGATCGAGCGCGCGCTGGATGCGGCGCTGCGCTTCCAGCCGAATCTCACCTGGATCGACA
CGCGCGCTCAGGCGCTGGACTTCACCGCTGACAGCGCCAGCGTCGGCCTCGCCAACGGCAATGTGATCGAGGCCGATCTG
GTGGTCGGCGCGGACGGCGCGCACTCGTGGGTGCGCGCGCAGATCGGCTCGAAAATGGACCGGCGCGACTACAGGCAGAC
CGGCGTGGTCGCCAATTTCAAGGCCGGGAAGCCGCACGGGGAGACTGCTTATCAGTGGTTCAAGGACGGCGAGATCATCG
CGCTGCTGCCCATGCCGGACGGTCACGTTTCGCTGGTGTGGTCGGCGCGCACCGAGCACGCCGCACAACTGGTCGCGCTC
GATCCGGCGCAGCTCGCCGCTGAGGTGGAGCGCGTCACGGGCGGCCAGTTCGGCGCGCTCGACTGCGTGACGCCCGCGCA
AGGTTTCCCGCTCGCGCTGCAAACGGTGGACCGGCTGGTGGCGCCGCGCGTCGCGCTGGTCGGCGACGCCGCGCATCTGA
TCCATCCGCTCGCCGGGCAGGGCATGAACCTGGGTTTGCGCGACGTCGCGGCGCTCGCCGACACCGTCGCCGGCAAGGAG
TCGTTCCGCGATCTCGGCGACATGGTGCTGCTGCGCCGCTACGAACGGGCGCGCCGCGAAGACATCCGCGCGCTGATGAT
CGCCACCGACGGTTTGCAAAAACTGTTTTCCGTTCCCGGTCCGTTCGCCAAGGCGCTGCGCAATACCGGCATGGCTTTCG
TCGGGGCGCAGCCGTTCATCAAACGCTGGCTGGTGTCGGCCGCGCTGGGTTGA

Upstream 100 bases:

>100_bases
GGCGGCGGCCGGTCATCCGTGAGTAGCGGCGCGCTTGTCCGGGCGCAAATGCCGCGCGCGTCGATCCGTCCCTCGCAACC
CCCGCGGCTATAATGCGCGG

Downstream 100 bases:

>100_bases
CGCGCGCGGTCCGGCGTGCCGCAGCCGGCCAGACAGGTATCATGAACGGATGGACGCGGTTCCGGTCAGACCGGAACCGT
CACGAAACGCGCCAAACGCG

Product: ubiquinone biosynthesis hydroxylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MNAHHQTFDAAVIGGGLVGKTAALALTQGGLRVALLAQPCAPLPPGASFDSRVYALSSSSQALLERLRVWQALDLTRLGP
VYDMRVYGDAHAELHFSAFQASVPQLAWIVESSVIERALDAALRFQPNLTWIDTRAQALDFTADSASVGLANGNVIEADL
VVGADGAHSWVRAQIGSKMDRRDYRQTGVVANFKAGKPHGETAYQWFKDGEIIALLPMPDGHVSLVWSARTEHAAQLVAL
DPAQLAAEVERVTGGQFGALDCVTPAQGFPLALQTVDRLVAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADTVAGKE
SFRDLGDMVLLRRYERARREDIRALMIATDGLQKLFSVPGPFAKALRNTGMAFVGAQPFIKRWLVSAALG

Sequences:

>Translated_390_residues
MNAHHQTFDAAVIGGGLVGKTAALALTQGGLRVALLAQPCAPLPPGASFDSRVYALSSSSQALLERLRVWQALDLTRLGP
VYDMRVYGDAHAELHFSAFQASVPQLAWIVESSVIERALDAALRFQPNLTWIDTRAQALDFTADSASVGLANGNVIEADL
VVGADGAHSWVRAQIGSKMDRRDYRQTGVVANFKAGKPHGETAYQWFKDGEIIALLPMPDGHVSLVWSARTEHAAQLVAL
DPAQLAAEVERVTGGQFGALDCVTPAQGFPLALQTVDRLVAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADTVAGKE
SFRDLGDMVLLRRYERARREDIRALMIATDGLQKLFSVPGPFAKALRNTGMAFVGAQPFIKRWLVSAALG
>Mature_390_residues
MNAHHQTFDAAVIGGGLVGKTAALALTQGGLRVALLAQPCAPLPPGASFDSRVYALSSSSQALLERLRVWQALDLTRLGP
VYDMRVYGDAHAELHFSAFQASVPQLAWIVESSVIERALDAALRFQPNLTWIDTRAQALDFTADSASVGLANGNVIEADL
VVGADGAHSWVRAQIGSKMDRRDYRQTGVVANFKAGKPHGETAYQWFKDGEIIALLPMPDGHVSLVWSARTEHAAQLVAL
DPAQLAAEVERVTGGQFGALDCVTPAQGFPLALQTVDRLVAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADTVAGKE
SFRDLGDMVLLRRYERARREDIRALMIATDGLQKLFSVPGPFAKALRNTGMAFVGAQPFIKRWLVSAALG

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=386, Percent_Identity=29.7927461139896, Blast_Score=142, Evalue=8e-34,
Organism=Homo sapiens, GI32967307, Length=348, Percent_Identity=30.4597701149425, Blast_Score=132, Evalue=8e-31,
Organism=Escherichia coli, GI1789273, Length=390, Percent_Identity=34.1025641025641, Blast_Score=201, Evalue=5e-53,
Organism=Escherichia coli, GI1786883, Length=392, Percent_Identity=34.6938775510204, Blast_Score=181, Evalue=5e-47,
Organism=Escherichia coli, GI1789274, Length=354, Percent_Identity=32.4858757062147, Blast_Score=158, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI25146631, Length=433, Percent_Identity=30.0230946882217, Blast_Score=152, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6321694, Length=294, Percent_Identity=29.9319727891156, Blast_Score=87, Evalue=5e-18,
Organism=Drosophila melanogaster, GI19920760, Length=433, Percent_Identity=29.7921478060046, Blast_Score=145, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41738; Mature: 41738

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAHHQTFDAAVIGGGLVGKTAALALTQGGLRVALLAQPCAPLPPGASFDSRVYALSSSS
CCCCCCCCCHHEECCCHHHHHHHEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEECCCH
QALLERLRVWQALDLTRLGPVYDMRVYGDAHAELHFSAFQASVPQLAWIVESSVIERALD
HHHHHHHHHHHHHCHHHCCCEEEEEEECCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHH
AALRFQPNLTWIDTRAQALDFTADSASVGLANGNVIEADLVVGADGAHSWVRAQIGSKMD
HHHHCCCCCEEEECCHHHEEECCCCCCEEECCCCEEEEEEEEECCCCHHHHHHHHCCHHH
RRDYRQTGVVANFKAGKPHGETAYQWFKDGEIIALLPMPDGHVSLVWSARTEHAAQLVAL
HHHHHHHCCEEEECCCCCCCCHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCHHEEEEE
DPAQLAAEVERVTGGQFGALDCVTPAQGFPLALQTVDRLVAPRVALVGDAAHLIHPLAGQ
CHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCHHHEECCHHHHHHHHCCC
GMNLGLRDVAALADTVAGKESFRDLGDMVLLRRYERARREDIRALMIATDGLQKLFSVPG
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHCCCC
PFAKALRNTGMAFVGAQPFIKRWLVSAALG
HHHHHHHHCCEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNAHHQTFDAAVIGGGLVGKTAALALTQGGLRVALLAQPCAPLPPGASFDSRVYALSSSS
CCCCCCCCCHHEECCCHHHHHHHEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEECCCH
QALLERLRVWQALDLTRLGPVYDMRVYGDAHAELHFSAFQASVPQLAWIVESSVIERALD
HHHHHHHHHHHHHCHHHCCCEEEEEEECCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHH
AALRFQPNLTWIDTRAQALDFTADSASVGLANGNVIEADLVVGADGAHSWVRAQIGSKMD
HHHHCCCCCEEEECCHHHEEECCCCCCEEECCCCEEEEEEEEECCCCHHHHHHHHCCHHH
RRDYRQTGVVANFKAGKPHGETAYQWFKDGEIIALLPMPDGHVSLVWSARTEHAAQLVAL
HHHHHHHCCEEEECCCCCCCCHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCHHEEEEE
DPAQLAAEVERVTGGQFGALDCVTPAQGFPLALQTVDRLVAPRVALVGDAAHLIHPLAGQ
CHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCHHHEECCHHHHHHHHCCC
GMNLGLRDVAALADTVAGKESFRDLGDMVLLRRYERARREDIRALMIATDGLQKLFSVPG
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHCCCC
PFAKALRNTGMAFVGAQPFIKRWLVSAALG
HHHHHHHHCCEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]