Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is 91785325

Identifier: 91785325

GI number: 91785325

Start: 4384648

End: 4386438

Strand: Reverse

Name: 91785325

Synonym: Bxe_A0454

Alternate gene names: NA

Gene position: 4386438-4384648 (Counterclockwise)

Preceding gene: 91785326

Following gene: 91785324

Centisome position: 89.6

GC content: 66.0

Gene sequence:

>1791_bases
ATGAAGCCGATCCGCTACACCATCGTTCCCAAACAGCCCGCCGCCCACCTGTTCGAAGTCACCGTGACCGTCGCCGACCC
CGATCCGGCCGGCCAGCGGTTCATGCTGCCGGTGTGGATTCCGGGCAGCTACATGGTGCGCGAGTTCGCCCGCAACATCG
TGACGCTGCGCGCTTTCAACGACGCCGGCCGCAAGGTGCACGTCGAAAAGACCGACAAGCACACGTGGCAGGCCGCGCCG
GTCAAAGGCGCGCTGACGCTGCGCTACGAGGTCTACGCGTGGGATCTGTCGGTGCGCGCCGCGCATCTCGACGACACGAC
GGGCTTTTTCAACGGCACGAGCGTGTTCCTCTCGCCGCTCGGTCACGAGGAAGCGCAGTGCGTGGTCGATATCCAGAAAC
CGGACGGCGCGGCGTATCGCAACTGGCGTGTGGCCACCGCGCTGCCGGAAGCACGCGGCACGAAGCGTTATGGTTTCGGC
GAGTACCGCGCGCAGAACTACGACGAGCTGATCGATCACCCCGTCACGCTGGGCGAATTCGCGCTGGCCACGTTCAAGGC
GCATGGCGTGCCGCACGACATCGTGATCGCCGGGCGCGTGGTCGGGCTGGACATGGCGCGTCTGTCCGCCGACCTGAAGC
GCATTTGCGAAGCGCAGATCGCGTTGTTCGAGCCCAAGTCGAAGAAAGCGCCAGTGGATCGCTATGTGTTCATGACCCAG
GCCGTCACCGATGGATACGGCGGGCTGGAGCACCGCGCTTCGACCGCGCTGATCTGCAATCGCGGCGATCTGCCGGTGGA
AGGGCGCGAGGCGCTGACCGAAGGCTACCGAACCTATCTCGGCCTGTGCAGCCACGAATACTTCCACACCTGGAACGTGA
AGCGCATCAAACCGGCCGTGTTCGCGCCGTACGACCTGAGCGTCGAAAACTACACGTCGCTGCTGTGGCTGTTCGAAGGC
TTCACGTCTTACTACGACGACCTGATCCTCGTGCGCAGCGGCCTGATTTCGCAGGACGACTATTTCGGCCTGCTCGGCAA
GGTGATCGGCGGCGTGCAGCGCGGCAGCGGGCGCCTCAAGCAGAGCGTCGCCGAAAGCTCGTTCGACGCCTGGGTCAAAT
ACTACCGGCAGGACGAGAACGCGCCGAACGCGATCGTCAGCTATTACACCAAGGGCTCGCTCGTCGCGCTCGCGTTCGAT
CTGACCATCCGCGCGCAGACCAATAACCGCAAATCGCTCGACGACGTGATGCGCTTGCTGTGGCAGCGCTTCGGCCGTGA
CTTCTATCGCGGCAAGCCGGTCGGTGTGGAAGAAAGCGAGATCGAGGCGCTGTTCGCGGAAGCGACCGGCGCGAAACTGG
CCGGGTTGTTCGCCGAAGCCGTGCACGGCACGCGCGATCTGCCGCTCGACACGCTGCTCGCGCCGTTCGGCGTCGCGATT
GCGCCCGAGCTCGACAAGAACGGCAAGCCGTCGCTCGGCGCACGTGTGCGCGGCGGCGCGGATTGCACGCTCGCGGCGGT
TCATGAGGGCAGCGCCGCGCAGAAAGCCGGGCTCTCGGCCGGCGACGTGCTGATCGCGCTCGACGGCCTGCGCGTGACCG
GCTCGAATCTTGACGGGCTGCTCGCGCGCTACCAGCCGGGCGCGAAGGTGGAGGTTCACGCTTTCCGCCGCGACGAGTTG
CGCACCACGCAAGTCAAGCTGGACGGCCCTGAGGTGGCGCGCTACAAGCTCGCCGTCAGCGACAAGCGGCCCGCCGCGCG
CAAGGCGCGCGAGTACTGGCTGGCAAGCTGA

Upstream 100 bases:

>100_bases
GCTGAGCACGCCCAACCCATCCGGCAAAGGAGGCGCGACGTGCGCCTCCTTTCGCATCAAGCCCGACCATCCCCGCCAGA
ACACTTCCAATTCGCCGCCG

Downstream 100 bases:

>100_bases
TCGTCATCCGGCCGTCGCTATTGGGCGGCGGAGCGTGGCGGATTGTTCTACCACTGCAACAATCCGTCGCCGCCGGACGG
CTTTTTCCCGGGTCGGTAAA

Product: metalloprotease, zinc binding

Products: NA

Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; Glycyl Aminopeptidase; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Trypsin-Like Serine Protease; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; PDZ Domain Family Protein; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Protease With C-Terminal PDZ Domain; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MKPIRYTIVPKQPAAHLFEVTVTVADPDPAGQRFMLPVWIPGSYMVREFARNIVTLRAFNDAGRKVHVEKTDKHTWQAAP
VKGALTLRYEVYAWDLSVRAAHLDDTTGFFNGTSVFLSPLGHEEAQCVVDIQKPDGAAYRNWRVATALPEARGTKRYGFG
EYRAQNYDELIDHPVTLGEFALATFKAHGVPHDIVIAGRVVGLDMARLSADLKRICEAQIALFEPKSKKAPVDRYVFMTQ
AVTDGYGGLEHRASTALICNRGDLPVEGREALTEGYRTYLGLCSHEYFHTWNVKRIKPAVFAPYDLSVENYTSLLWLFEG
FTSYYDDLILVRSGLISQDDYFGLLGKVIGGVQRGSGRLKQSVAESSFDAWVKYYRQDENAPNAIVSYYTKGSLVALAFD
LTIRAQTNNRKSLDDVMRLLWQRFGRDFYRGKPVGVEESEIEALFAEATGAKLAGLFAEAVHGTRDLPLDTLLAPFGVAI
APELDKNGKPSLGARVRGGADCTLAAVHEGSAAQKAGLSAGDVLIALDGLRVTGSNLDGLLARYQPGAKVEVHAFRRDEL
RTTQVKLDGPEVARYKLAVSDKRPAARKAREYWLAS

Sequences:

>Translated_596_residues
MKPIRYTIVPKQPAAHLFEVTVTVADPDPAGQRFMLPVWIPGSYMVREFARNIVTLRAFNDAGRKVHVEKTDKHTWQAAP
VKGALTLRYEVYAWDLSVRAAHLDDTTGFFNGTSVFLSPLGHEEAQCVVDIQKPDGAAYRNWRVATALPEARGTKRYGFG
EYRAQNYDELIDHPVTLGEFALATFKAHGVPHDIVIAGRVVGLDMARLSADLKRICEAQIALFEPKSKKAPVDRYVFMTQ
AVTDGYGGLEHRASTALICNRGDLPVEGREALTEGYRTYLGLCSHEYFHTWNVKRIKPAVFAPYDLSVENYTSLLWLFEG
FTSYYDDLILVRSGLISQDDYFGLLGKVIGGVQRGSGRLKQSVAESSFDAWVKYYRQDENAPNAIVSYYTKGSLVALAFD
LTIRAQTNNRKSLDDVMRLLWQRFGRDFYRGKPVGVEESEIEALFAEATGAKLAGLFAEAVHGTRDLPLDTLLAPFGVAI
APELDKNGKPSLGARVRGGADCTLAAVHEGSAAQKAGLSAGDVLIALDGLRVTGSNLDGLLARYQPGAKVEVHAFRRDEL
RTTQVKLDGPEVARYKLAVSDKRPAARKAREYWLAS
>Mature_596_residues
MKPIRYTIVPKQPAAHLFEVTVTVADPDPAGQRFMLPVWIPGSYMVREFARNIVTLRAFNDAGRKVHVEKTDKHTWQAAP
VKGALTLRYEVYAWDLSVRAAHLDDTTGFFNGTSVFLSPLGHEEAQCVVDIQKPDGAAYRNWRVATALPEARGTKRYGFG
EYRAQNYDELIDHPVTLGEFALATFKAHGVPHDIVIAGRVVGLDMARLSADLKRICEAQIALFEPKSKKAPVDRYVFMTQ
AVTDGYGGLEHRASTALICNRGDLPVEGREALTEGYRTYLGLCSHEYFHTWNVKRIKPAVFAPYDLSVENYTSLLWLFEG
FTSYYDDLILVRSGLISQDDYFGLLGKVIGGVQRGSGRLKQSVAESSFDAWVKYYRQDENAPNAIVSYYTKGSLVALAFD
LTIRAQTNNRKSLDDVMRLLWQRFGRDFYRGKPVGVEESEIEALFAEATGAKLAGLFAEAVHGTRDLPLDTLLAPFGVAI
APELDKNGKPSLGARVRGGADCTLAAVHEGSAAQKAGLSAGDVLIALDGLRVTGSNLDGLLARYQPGAKVEVHAFRRDEL
RTTQVKLDGPEVARYKLAVSDKRPAARKAREYWLAS

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65914; Mature: 65914

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIRYTIVPKQPAAHLFEVTVTVADPDPAGQRFMLPVWIPGSYMVREFARNIVTLRAFN
CCCEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHEEEEEEEC
DAGRKVHVEKTDKHTWQAAPVKGALTLRYEVYAWDLSVRAAHLDDTTGFFNGTSVFLSPL
CCCCEEEEEECCCCCEEECCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEEECC
GHEEAQCVVDIQKPDGAAYRNWRVATALPEARGTKRYGFGEYRAQNYDELIDHPVTLGEF
CCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHCCCHHHHHCCCCCHHHH
ALATFKAHGVPHDIVIAGRVVGLDMARLSADLKRICEAQIALFEPKSKKAPVDRYVFMTQ
HHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHEEEEEH
AVTDGYGGLEHRASTALICNRGDLPVEGREALTEGYRTYLGLCSHEYFHTWNVKRIKPAV
HHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCEEECCEE
FAPYDLSVENYTSLLWLFEGFTSYYDDLILVRSGLISQDDYFGLLGKVIGGVQRGSGRLK
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHH
QSVAESSFDAWVKYYRQDENAPNAIVSYYTKGSLVALAFDLTIRAQTNNRKSLDDVMRLL
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCCCCHHHHHHHH
WQRFGRDFYRGKPVGVEESEIEALFAEATGAKLAGLFAEAVHGTRDLPLDTLLAPFGVAI
HHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHCCCEEE
APELDKNGKPSLGARVRGGADCTLAAVHEGSAAQKAGLSAGDVLIALDGLRVTGSNLDGL
CCCCCCCCCCCCCCEECCCCCEEEEEEECCCCHHHCCCCCCCEEEEEECEEEECCCCHHH
LARYQPGAKVEVHAFRRDELRTTQVKLDGPEVARYKLAVSDKRPAARKAREYWLAS
HHHCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKPIRYTIVPKQPAAHLFEVTVTVADPDPAGQRFMLPVWIPGSYMVREFARNIVTLRAFN
CCCEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHEEEEEEEC
DAGRKVHVEKTDKHTWQAAPVKGALTLRYEVYAWDLSVRAAHLDDTTGFFNGTSVFLSPL
CCCCEEEEEECCCCCEEECCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEEECC
GHEEAQCVVDIQKPDGAAYRNWRVATALPEARGTKRYGFGEYRAQNYDELIDHPVTLGEF
CCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHCCCHHHHHCCCCCHHHH
ALATFKAHGVPHDIVIAGRVVGLDMARLSADLKRICEAQIALFEPKSKKAPVDRYVFMTQ
HHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHEEEEEH
AVTDGYGGLEHRASTALICNRGDLPVEGREALTEGYRTYLGLCSHEYFHTWNVKRIKPAV
HHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCEEECCEE
FAPYDLSVENYTSLLWLFEGFTSYYDDLILVRSGLISQDDYFGLLGKVIGGVQRGSGRLK
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHH
QSVAESSFDAWVKYYRQDENAPNAIVSYYTKGSLVALAFDLTIRAQTNNRKSLDDVMRLL
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCCCCHHHHHHHH
WQRFGRDFYRGKPVGVEESEIEALFAEATGAKLAGLFAEAVHGTRDLPLDTLLAPFGVAI
HHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHCCCEEE
APELDKNGKPSLGARVRGGADCTLAAVHEGSAAQKAGLSAGDVLIALDGLRVTGSNLDGL
CCCCCCCCCCCCCCEECCCCCEEEEEEECCCCHHHCCCCCCCEEEEEECEEEECCCCHHH
LARYQPGAKVEVHAFRRDELRTTQVKLDGPEVARYKLAVSDKRPAARKAREYWLAS
HHHCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA