Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is apaG [H]

Identifier: 91785315

GI number: 91785315

Start: 4375748

End: 4376122

Strand: Reverse

Name: apaG [H]

Synonym: Bxe_A0464

Alternate gene names: 91785315

Gene position: 4376122-4375748 (Counterclockwise)

Preceding gene: 91785324

Following gene: 91785314

Centisome position: 89.38

GC content: 61.33

Gene sequence:

>375_bases
ATGAGCCAGTACGAATTCAGCGTCTCGACGCAGGTGCAATATCTGCCCGAAGAGTCGGACCCGGAGCGCCGCCAGTATGC
ATTCGCATACACGCTGACTATCCGTAACACCGGCCAGGTGCCCGCGCAGTTGATCGCGCGGCATTGGGTCATCACAGACA
GCGACAAGAACGTGCAGGAAGTGAAGGGTCTTGGCGTGGTCGGCCATCAGCCGCTGCTCAAACCGGGCGAGCATTTCGAG
TACACGAGTTGGGCGGTGATCGCCACACCGGTCGGCACCATGCGCGGAGAATACTTCTGTGTGGCCGAGGACGGCGAGCG
GTTCGATGCGCCGGTGCCGGAGTTCATCCTGCGCATGCCGCGTACGTTGCATTGA

Upstream 100 bases:

>100_bases
CCAACACCATCAGCGCCGCTTCGCCAATGCGCCCGCAAACCATTGGCGTTCGGGCTTTCCCGCGACATTTCACACCGCGT
TTCAGCAGACCGGAATCAGG

Downstream 100 bases:

>100_bases
ACCGGGCGCGTGGCTCGCGGTCTTTAGAAAGCTCAATGCGCGATTCAACGCGCAGCTTTACTGCGGTTTTTGCTGTTTTT
GTTGCTTTTGCTGTTCAGTG

Product: ApaG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSQYEFSVSTQVQYLPEESDPERRQYAFAYTLTIRNTGQVPAQLIARHWVITDSDKNVQEVKGLGVVGHQPLLKPGEHFE
YTSWAVIATPVGTMRGEYFCVAEDGERFDAPVPEFILRMPRTLH

Sequences:

>Translated_124_residues
MSQYEFSVSTQVQYLPEESDPERRQYAFAYTLTIRNTGQVPAQLIARHWVITDSDKNVQEVKGLGVVGHQPLLKPGEHFE
YTSWAVIATPVGTMRGEYFCVAEDGERFDAPVPEFILRMPRTLH
>Mature_123_residues
SQYEFSVSTQVQYLPEESDPERRQYAFAYTLTIRNTGQVPAQLIARHWVITDSDKNVQEVKGLGVVGHQPLLKPGEHFEY
TSWAVIATPVGTMRGEYFCVAEDGERFDAPVPEFILRMPRTLH

Specific function: Unknown

COG id: COG2967

COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 apaG domain [H]

Homologues:

Organism=Escherichia coli, GI1786235, Length=119, Percent_Identity=47.8991596638655, Blast_Score=119, Evalue=6e-29,
Organism=Drosophila melanogaster, GI21356905, Length=105, Percent_Identity=34.2857142857143, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24644238, Length=105, Percent_Identity=34.2857142857143, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007474
- InterPro:   IPR023065 [H]

Pfam domain/function: PF04379 DUF525 [H]

EC number: NA

Molecular weight: Translated: 14173; Mature: 14042

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS51087 APAG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYEFSVSTQVQYLPEESDPERRQYAFAYTLTIRNTGQVPAQLIARHWVITDSDKNVQE
CCCCCCEECEEEEECCCCCCCCHHEEEEEEEEEECCCCCCHHHHHHHHEEEECCCCCHHH
VKGLGVVGHQPLLKPGEHFEYTSWAVIATPVGTMRGEYFCVAEDGERFDAPVPEFILRMP
HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHCC
RTLH
CCCC
>Mature Secondary Structure 
SQYEFSVSTQVQYLPEESDPERRQYAFAYTLTIRNTGQVPAQLIARHWVITDSDKNVQE
CCCCCEECEEEEECCCCCCCCHHEEEEEEEEEECCCCCCHHHHHHHHEEEECCCCCHHH
VKGLGVVGHQPLLKPGEHFEYTSWAVIATPVGTMRGEYFCVAEDGERFDAPVPEFILRMP
HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHCC
RTLH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]