| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is apaG [H]
Identifier: 91785315
GI number: 91785315
Start: 4375748
End: 4376122
Strand: Reverse
Name: apaG [H]
Synonym: Bxe_A0464
Alternate gene names: 91785315
Gene position: 4376122-4375748 (Counterclockwise)
Preceding gene: 91785324
Following gene: 91785314
Centisome position: 89.38
GC content: 61.33
Gene sequence:
>375_bases ATGAGCCAGTACGAATTCAGCGTCTCGACGCAGGTGCAATATCTGCCCGAAGAGTCGGACCCGGAGCGCCGCCAGTATGC ATTCGCATACACGCTGACTATCCGTAACACCGGCCAGGTGCCCGCGCAGTTGATCGCGCGGCATTGGGTCATCACAGACA GCGACAAGAACGTGCAGGAAGTGAAGGGTCTTGGCGTGGTCGGCCATCAGCCGCTGCTCAAACCGGGCGAGCATTTCGAG TACACGAGTTGGGCGGTGATCGCCACACCGGTCGGCACCATGCGCGGAGAATACTTCTGTGTGGCCGAGGACGGCGAGCG GTTCGATGCGCCGGTGCCGGAGTTCATCCTGCGCATGCCGCGTACGTTGCATTGA
Upstream 100 bases:
>100_bases CCAACACCATCAGCGCCGCTTCGCCAATGCGCCCGCAAACCATTGGCGTTCGGGCTTTCCCGCGACATTTCACACCGCGT TTCAGCAGACCGGAATCAGG
Downstream 100 bases:
>100_bases ACCGGGCGCGTGGCTCGCGGTCTTTAGAAAGCTCAATGCGCGATTCAACGCGCAGCTTTACTGCGGTTTTTGCTGTTTTT GTTGCTTTTGCTGTTCAGTG
Product: ApaG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSQYEFSVSTQVQYLPEESDPERRQYAFAYTLTIRNTGQVPAQLIARHWVITDSDKNVQEVKGLGVVGHQPLLKPGEHFE YTSWAVIATPVGTMRGEYFCVAEDGERFDAPVPEFILRMPRTLH
Sequences:
>Translated_124_residues MSQYEFSVSTQVQYLPEESDPERRQYAFAYTLTIRNTGQVPAQLIARHWVITDSDKNVQEVKGLGVVGHQPLLKPGEHFE YTSWAVIATPVGTMRGEYFCVAEDGERFDAPVPEFILRMPRTLH >Mature_123_residues SQYEFSVSTQVQYLPEESDPERRQYAFAYTLTIRNTGQVPAQLIARHWVITDSDKNVQEVKGLGVVGHQPLLKPGEHFEY TSWAVIATPVGTMRGEYFCVAEDGERFDAPVPEFILRMPRTLH
Specific function: Unknown
COG id: COG2967
COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 apaG domain [H]
Homologues:
Organism=Escherichia coli, GI1786235, Length=119, Percent_Identity=47.8991596638655, Blast_Score=119, Evalue=6e-29, Organism=Drosophila melanogaster, GI21356905, Length=105, Percent_Identity=34.2857142857143, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI24644238, Length=105, Percent_Identity=34.2857142857143, Blast_Score=66, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007474 - InterPro: IPR023065 [H]
Pfam domain/function: PF04379 DUF525 [H]
EC number: NA
Molecular weight: Translated: 14173; Mature: 14042
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS51087 APAG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQYEFSVSTQVQYLPEESDPERRQYAFAYTLTIRNTGQVPAQLIARHWVITDSDKNVQE CCCCCCEECEEEEECCCCCCCCHHEEEEEEEEEECCCCCCHHHHHHHHEEEECCCCCHHH VKGLGVVGHQPLLKPGEHFEYTSWAVIATPVGTMRGEYFCVAEDGERFDAPVPEFILRMP HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHCC RTLH CCCC >Mature Secondary Structure SQYEFSVSTQVQYLPEESDPERRQYAFAYTLTIRNTGQVPAQLIARHWVITDSDKNVQE CCCCCEECEEEEECCCCCCCCHHEEEEEEEEEECCCCCCHHHHHHHHEEEECCCCCHHH VKGLGVVGHQPLLKPGEHFEYTSWAVIATPVGTMRGEYFCVAEDGERFDAPVPEFILRMP HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHCC RTLH CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]