| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785287
Identifier: 91785287
GI number: 91785287
Start: 4335353
End: 4335856
Strand: Reverse
Name: 91785287
Synonym: Bxe_A0492
Alternate gene names: NA
Gene position: 4335856-4335353 (Counterclockwise)
Preceding gene: 91785288
Following gene: 91785286
Centisome position: 88.56
GC content: 62.7
Gene sequence:
>504_bases ATGATTCAGACAGGTGACAAGCTGCCCGACGCAACGCTCTTCGAGTTGATCGAAGACGAGCGGGCGGGCTGCACGATCGG GCCTAACAGCTTCGACGTGCGCGAGCAGACGGCGGGCAAGCGTGTGGTGATCTTCGGATTGCCGGGCGCGTTCACGCCGA CCTGTTCAGCCAAACATGTACCGGGTTATGTCGAGCATGCCGGGCAGTTGCGCGCTCTCGGCATCGACGAAATCTGGTGC GTGTCCGTCAACGACGCGTTCGTAATGGGCGCGTGGGGACGCGATCAGCACGCCTCGGGCAAGGTGCGCATGATGGCGGA CGGCAGTGCGGCTTTCACGCGAGCGCTCGGTCTCGAGCAGGATTTGTCGGCGCGCGGCATGGGAATCCGTTCCCAGCGCT ACGCGATGGTGGTCGACGACGGCGTGGTCAAGACGTTGAACGTCGAGGCTGCCGGCAAATTCGAAGTCAGCGATGCAGGG AGTATTCTCGCCACGTTGAGCTAG
Upstream 100 bases:
>100_bases CTGTCGCCGGGCGGCGGAACGTGTAGTGGGGTTCATGCCGGTTTTTCACTGCGACACGACGACGTGCGAGCGTGCTTCGC ATCGATGCAAAGGACTGAGC
Downstream 100 bases:
>100_bases GCACGTTGGCGTCGCGGCCTTCACCTTGGGCATACGCTTTGCGCGTTGTGCCAGGGCAACGGCCGATAAGACGCTTTTGT GACAGGCCGTTACGCGGGCC
Product: type 2 peroxiredoxin AhpC/TSAfamily
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MIQTGDKLPDATLFELIEDERAGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHVPGYVEHAGQLRALGIDEIWC VSVNDAFVMGAWGRDQHASGKVRMMADGSAAFTRALGLEQDLSARGMGIRSQRYAMVVDDGVVKTLNVEAAGKFEVSDAG SILATLS
Sequences:
>Translated_167_residues MIQTGDKLPDATLFELIEDERAGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHVPGYVEHAGQLRALGIDEIWC VSVNDAFVMGAWGRDQHASGKVRMMADGSAAFTRALGLEQDLSARGMGIRSQRYAMVVDDGVVKTLNVEAAGKFEVSDAG SILATLS >Mature_167_residues MIQTGDKLPDATLFELIEDERAGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHVPGYVEHAGQLRALGIDEIWC VSVNDAFVMGAWGRDQHASGKVRMMADGSAAFTRALGLEQDLSARGMGIRSQRYAMVVDDGVVKTLNVEAAGKFEVSDAG SILATLS
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=168, Percent_Identity=43.452380952381, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6323138, Length=134, Percent_Identity=33.5820895522388, Blast_Score=76, Evalue=3e-15, Organism=Drosophila melanogaster, GI78706776, Length=153, Percent_Identity=49.6732026143791, Blast_Score=149, Evalue=8e-37, Organism=Drosophila melanogaster, GI78709078, Length=153, Percent_Identity=49.6732026143791, Blast_Score=149, Evalue=8e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013740 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17762; Mature: 17762
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQTGDKLPDATLFELIEDERAGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHV CCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCCHHCCCCCEEEEEECCCCCCCCCCCCCC PGYVEHAGQLRALGIDEIWCVSVNDAFVMGAWGRDQHASGKVRMMADGSAAFTRALGLEQ CCHHHCCCCEEEECCCEEEEEEECCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHCCCC DLSARGMGIRSQRYAMVVDDGVVKTLNVEAAGKFEVSDAGSILATLS CCCCCCCCCCCCEEEEEEECCEEEEEEECCCCEEEECCCCCEEEEEC >Mature Secondary Structure MIQTGDKLPDATLFELIEDERAGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHV CCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCCHHCCCCCEEEEEECCCCCCCCCCCCCC PGYVEHAGQLRALGIDEIWCVSVNDAFVMGAWGRDQHASGKVRMMADGSAAFTRALGLEQ CCHHHCCCCEEEECCCEEEEEEECCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHCCCC DLSARGMGIRSQRYAMVVDDGVVKTLNVEAAGKFEVSDAGSILATLS CCCCCCCCCCCCEEEEEEECCEEEEEEECCCCEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]