| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is aroE [H]
Identifier: 91785240
GI number: 91785240
Start: 4287377
End: 4288240
Strand: Reverse
Name: aroE [H]
Synonym: Bxe_A0539
Alternate gene names: 91785240
Gene position: 4288240-4287377 (Counterclockwise)
Preceding gene: 91785241
Following gene: 91785239
Centisome position: 87.59
GC content: 67.82
Gene sequence:
>864_bases ATGAGCGCCGGCGATTCACTCGACCGGTACGCGGTTATCGGCAATCCGGTCGGCCACAGCAAGTCACCGTTCATTCACGG CCGCTTTGCCGAGCAGACCGGCGAGGCTATCGAGTATGGCCGCCTGCTCGCGCCGGTGGATGCGTTCGTGCCCACCGTGC GGGCTTTCATCGAAGCAGGCGGGCGCGGCCTGAACGTGACCGTGCCGTTCAAGCTCGAAGCGTGTACGTTCGCCGACACG TTGTCGCCGCGCGCGGCCGCCGCGGGCGCGGTGAACACGTTGCGCGTCGATGCGAACGGTATTTACGGCGACAACACCGA TGGCTTTGGTCTCGTGCGCGATATCGAGGTGAATCTCGGCGTGTCCCTGAAGGGCGCGCGCATTCTGTTGCTGGGTGCGG GCGGCGCCGCGCGCGGCGTGGTTCTGCCGATATTGGAGCGGGCGCCGCATACGCTGACCATCATCAATCGCACCGCGCAG AAGGCCGAAGCGCTGGTCGATCAGTTCGCGCAGGCCGCGCGCGACGCCGCGTGCCGGCTGGGCGGCGGCAGCGCGCGGGC GATCGAAGCGGGCGCGTATGACGTGATCGTGAACGCCACGGCGGGGAGCCTGGACGCGTCGTTGCCCGAGTGCGACGACC GAGCGTTCGGCAGCGGCACACTCGCTTACGACATGATGTATGGCGCGCATCCCACGGTGTTCATGGAACACGCGCGGAAA CTGGGCGCGCGCGGTGCAGATGGACTCGGCATGCTGGTCGAGCAGGCCGCCGAATCGTTTTATGTGTGGCGCGGCGTGCG GCCTGACGGCGCGCCGGTGCTGGCCGAATTGCGGGCGCTGTTGACGGCGCCGTCGCACGCATAA
Upstream 100 bases:
>100_bases GCGAGGCGGCGGCCGCGCCGAACGACGCCGCAAATGGCGAAGGCGAGGGCGAAAGCGCGAGCGATGCCGCCACGCATCGG CACGTCGCGGAGCCGGGACG
Downstream 100 bases:
>100_bases AGTTGCGCATCACCTTGCCGCATTCACCGACACGAGGATCTCGAGCACGATGACAGCAACGCGGCGCGTGAGCCGGCCAG GTCCGGTGCGATGGATGTTT
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSAGDSLDRYAVIGNPVGHSKSPFIHGRFAEQTGEAIEYGRLLAPVDAFVPTVRAFIEAGGRGLNVTVPFKLEACTFADT LSPRAAAAGAVNTLRVDANGIYGDNTDGFGLVRDIEVNLGVSLKGARILLLGAGGAARGVVLPILERAPHTLTIINRTAQ KAEALVDQFAQAARDAACRLGGGSARAIEAGAYDVIVNATAGSLDASLPECDDRAFGSGTLAYDMMYGAHPTVFMEHARK LGARGADGLGMLVEQAAESFYVWRGVRPDGAPVLAELRALLTAPSHA
Sequences:
>Translated_287_residues MSAGDSLDRYAVIGNPVGHSKSPFIHGRFAEQTGEAIEYGRLLAPVDAFVPTVRAFIEAGGRGLNVTVPFKLEACTFADT LSPRAAAAGAVNTLRVDANGIYGDNTDGFGLVRDIEVNLGVSLKGARILLLGAGGAARGVVLPILERAPHTLTIINRTAQ KAEALVDQFAQAARDAACRLGGGSARAIEAGAYDVIVNATAGSLDASLPECDDRAFGSGTLAYDMMYGAHPTVFMEHARK LGARGADGLGMLVEQAAESFYVWRGVRPDGAPVLAELRALLTAPSHA >Mature_286_residues SAGDSLDRYAVIGNPVGHSKSPFIHGRFAEQTGEAIEYGRLLAPVDAFVPTVRAFIEAGGRGLNVTVPFKLEACTFADTL SPRAAAAGAVNTLRVDANGIYGDNTDGFGLVRDIEVNLGVSLKGARILLLGAGGAARGVVLPILERAPHTLTIINRTAQK AEALVDQFAQAARDAACRLGGGSARAIEAGAYDVIVNATAGSLDASLPECDDRAFGSGTLAYDMMYGAHPTVFMEHARKL GARGADGLGMLVEQAAESFYVWRGVRPDGAPVLAELRALLTAPSHA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1789675, Length=279, Percent_Identity=46.9534050179211, Blast_Score=231, Evalue=5e-62, Organism=Escherichia coli, GI1787983, Length=273, Percent_Identity=28.9377289377289, Blast_Score=102, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6320332, Length=161, Percent_Identity=31.055900621118, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 [H]
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N [H]
EC number: =1.1.1.25 [H]
Molecular weight: Translated: 29845; Mature: 29714
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGDSLDRYAVIGNPVGHSKSPFIHGRFAEQTGEAIEYGRLLAPVDAFVPTVRAFIEAG CCCCCCCCCEEEECCCCCCCCCCEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC GRGLNVTVPFKLEACTFADTLSPRAAAAGAVNTLRVDANGIYGDNTDGFGLVRDIEVNLG CCCEEEEEEEEEEEEEHHHCCCCHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECC VSLKGARILLLGAGGAARGVVLPILERAPHTLTIINRTAQKAEALVDQFAQAARDAACRL EEECCCEEEEEECCCCCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEC GGGSARAIEAGAYDVIVNATAGSLDASLPECDDRAFGSGTLAYDMMYGAHPTVFMEHARK CCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCHHHHHHHHH LGARGADGLGMLVEQAAESFYVWRGVRPDGAPVLAELRALLTAPSHA HCCCCCCHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure SAGDSLDRYAVIGNPVGHSKSPFIHGRFAEQTGEAIEYGRLLAPVDAFVPTVRAFIEAG CCCCCCCCEEEECCCCCCCCCCEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC GRGLNVTVPFKLEACTFADTLSPRAAAAGAVNTLRVDANGIYGDNTDGFGLVRDIEVNLG CCCEEEEEEEEEEEEEHHHCCCCHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECC VSLKGARILLLGAGGAARGVVLPILERAPHTLTIINRTAQKAEALVDQFAQAARDAACRL EEECCCEEEEEECCCCCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEC GGGSARAIEAGAYDVIVNATAGSLDASLPECDDRAFGSGTLAYDMMYGAHPTVFMEHARK CCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCHHHHHHHHH LGARGADGLGMLVEQAAESFYVWRGVRPDGAPVLAELRALLTAPSHA HCCCCCCHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA