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The map label for this gene is yagI [H]

Identifier: 91785237

GI number: 91785237

Start: 4283813

End: 4284685

Strand: Reverse

Name: yagI [H]

Synonym: Bxe_A0542

Alternate gene names: 91785237

Gene position: 4284685-4283813 (Counterclockwise)

Preceding gene: 91785239

Following gene: 91785236

Centisome position: 87.52

GC content: 68.38

Gene sequence:

>873_bases
GTGCCCCGCGCCGCCGCAGGTATCCAACCGCCTCCGGTCGACGGAATCGCCTTACCCAGCACGCTGCTCGACGTCACACC
GCAACAAGCCGGCACACAAACGCTGCTGCGCGGCCTCGCGATCCTGGAAGCCGCCGCCGCTGGCGTACGCGACCTGCGCA
CCTTCGGCGCCGCGCTCGGCACGACCCGCAGCACCACGCATCGACTGGTGAGCAGCCTCGTGCAAGCGCGCTATCTGCGC
CAGGTGCAAGGCGGCTATCTGCTCGGCCCGAAGCTGATCGAACTCGGCACCATCGCGCTCGAACAGATGCCGCTCACCGC
AGTCGCCCGTCAGCATCTCGAATCGCTCGCGGAGCAAACCCTCGACACCATCCACCTCGGCGTGCGCGACGGCGACGACG
TCCTGTACATCGACAAGATCCCCGGCACCCGCGGCCTCGAAATGCGCTCGCGCGTCGGCCACCGCATGCCGCTGGCATCG
ACGGGAATCGGCAAGGCCATGATGCTCGACCTCACGCCGGACGTGTGGCAAGCGCTCTTCGACGCATCGCGGCGCGCGCT
CGCCGGCGTCAGCTTCAAGCCGGATAACCGCCCCGACGCGCAGACCTTCATGCAGCGCATGGCGAACTACGCCGCCGGCG
GCTACACCTTCGACCTCGAAGAAAACGAAGCGTCGATCCGCTGCGTCGCGGCGCCCGTGCGCGATGCGTCGGGCGCGGTG
GTGGCGGCGCTTTCGGTGGCGAGCACGATTCCGTATATGTCGCTCGAACGCATGGACGAACTGATTCCGGTCGTGCAGCG
CGAGGCGCGCGCGATCTCGGAAGAACTCGGCTGGCGCGCCCCGCAACCGGCCACCCGCAGGATCAAGCGATGA

Upstream 100 bases:

>100_bases
CGCCGCGACCGCGTCCGAAGCCGATCTGGCGCCATCCGCCGATCAGGCGCCCAACGCCGCCCCGCGTTCCGCGCCCGCCG
CTAACGCGCCCGCCGCCAAA

Downstream 100 bases:

>100_bases
AGCAAGCGGGTTCCCCCACGCCGACAGCCAGTCACGCAGCGGCAGGCGCGGTCGACGCCAGCCACGCGCATGCCGCGCTG
ATCGCGCTCGACTGGGGCAC

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MPRAAAGIQPPPVDGIALPSTLLDVTPQQAGTQTLLRGLAILEAAAAGVRDLRTFGAALGTTRSTTHRLVSSLVQARYLR
QVQGGYLLGPKLIELGTIALEQMPLTAVARQHLESLAEQTLDTIHLGVRDGDDVLYIDKIPGTRGLEMRSRVGHRMPLAS
TGIGKAMMLDLTPDVWQALFDASRRALAGVSFKPDNRPDAQTFMQRMANYAAGGYTFDLEENEASIRCVAAPVRDASGAV
VAALSVASTIPYMSLERMDELIPVVQREARAISEELGWRAPQPATRRIKR

Sequences:

>Translated_290_residues
MPRAAAGIQPPPVDGIALPSTLLDVTPQQAGTQTLLRGLAILEAAAAGVRDLRTFGAALGTTRSTTHRLVSSLVQARYLR
QVQGGYLLGPKLIELGTIALEQMPLTAVARQHLESLAEQTLDTIHLGVRDGDDVLYIDKIPGTRGLEMRSRVGHRMPLAS
TGIGKAMMLDLTPDVWQALFDASRRALAGVSFKPDNRPDAQTFMQRMANYAAGGYTFDLEENEASIRCVAAPVRDASGAV
VAALSVASTIPYMSLERMDELIPVVQREARAISEELGWRAPQPATRRIKR
>Mature_289_residues
PRAAAGIQPPPVDGIALPSTLLDVTPQQAGTQTLLRGLAILEAAAAGVRDLRTFGAALGTTRSTTHRLVSSLVQARYLRQ
VQGGYLLGPKLIELGTIALEQMPLTAVARQHLESLAEQTLDTIHLGVRDGDDVLYIDKIPGTRGLEMRSRVGHRMPLAST
GIGKAMMLDLTPDVWQALFDASRRALAGVSFKPDNRPDAQTFMQRMANYAAGGYTFDLEENEASIRCVAAPVRDASGAVV
AALSVASTIPYMSLERMDELIPVVQREARAISEELGWRAPQPATRRIKR

Specific function: Transcriptional Regulator Of The Kdgk Gene For The Kdg Kinase And The Kdgt Gene For The Kdg Permease. [C]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1788131, Length=265, Percent_Identity=31.3207547169811, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1786468, Length=250, Percent_Identity=30.4, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789999, Length=254, Percent_Identity=29.1338582677165, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1788581, Length=226, Percent_Identity=31.858407079646, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87082359, Length=257, Percent_Identity=27.6264591439689, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1786715, Length=256, Percent_Identity=26.171875, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1790752, Length=264, Percent_Identity=23.4848484848485, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 31317; Mature: 31185

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRAAAGIQPPPVDGIALPSTLLDVTPQQAGTQTLLRGLAILEAAAAGVRDLRTFGAALG
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TTRSTTHRLVSSLVQARYLRQVQGGYLLGPKLIELGTIALEQMPLTAVARQHLESLAEQT
CCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LDTIHLGVRDGDDVLYIDKIPGTRGLEMRSRVGHRMPLASTGIGKAMMLDLTPDVWQALF
HHHHEECCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHH
DASRRALAGVSFKPDNRPDAQTFMQRMANYAAGGYTFDLEENEASIRCVAAPVRDASGAV
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCHH
VAALSVASTIPYMSLERMDELIPVVQREARAISEELGWRAPQPATRRIKR
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC
>Mature Secondary Structure 
PRAAAGIQPPPVDGIALPSTLLDVTPQQAGTQTLLRGLAILEAAAAGVRDLRTFGAALG
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TTRSTTHRLVSSLVQARYLRQVQGGYLLGPKLIELGTIALEQMPLTAVARQHLESLAEQT
CCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LDTIHLGVRDGDDVLYIDKIPGTRGLEMRSRVGHRMPLASTGIGKAMMLDLTPDVWQALF
HHHHEECCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHH
DASRRALAGVSFKPDNRPDAQTFMQRMANYAAGGYTFDLEENEASIRCVAAPVRDASGAV
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCHH
VAALSVASTIPYMSLERMDELIPVVQREARAISEELGWRAPQPATRRIKR
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]