Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is cbbGC [H]

Identifier: 91785213

GI number: 91785213

Start: 4260034

End: 4261044

Strand: Reverse

Name: cbbGC [H]

Synonym: Bxe_A0566

Alternate gene names: 91785213

Gene position: 4261044-4260034 (Counterclockwise)

Preceding gene: 91785214

Following gene: 91785211

Centisome position: 87.03

GC content: 62.12

Gene sequence:

>1011_bases
ATGACGATTCGCGTCGCAATCAACGGCTACGGCCGTATTGGCCGCAACACGCTGCGCGCCTTCTATGAAAACGGCAAGAA
GCACGATATCGAAATCGTCGCCATCAACGACCTCGGCGATGCCAGGACCAACGCTCACCTGACGCAATACGACACGGCGC
ACGGCAAGTTCCCGGGCGAAGTGTCGGTGGACGGCGACTACCTGGTCGTCAACGGCGACAAGATCCGCGTGCTGGCCAAC
CGCAACCCGGCTGAACTGCCGTGGGGCGAGCTGAACGTGGACGTCGTGATGGAATGCACGGGCTTTTTCACGACCAAGGA
AAAGGCCAGCGCGCACATCAAGGGCGGCGCAAAGAAGGTGATCATCTCGGCGCCGGGCGGTAAAGACGTCGACGCCACGA
TCGTCTACGGCGTGAACCACCATGTGCTGAAGGCATCGGACACGGTCATCTCGAACGCATCGTGCACGACGAACTGCCTC
GCGCCGCTCGTCAAGCCGCTGAACGACAAGATCGGTCTGGTGAACGGTCTGATGACCACGATCCACGCGTACACGAACGA
CCAGGTTCTGACGGACGTGTACCACGAAGACCTGCGCCGCGCGCGCTCGGCCACGCACAGCCAGATCCCGACCAAGACCG
GCGCGGCTTCGGCGGTCGGCCTGGTGCTGCCGGAACTGAACGGCAAGCTGGACGGCTACGCGATTCGCGTGCCGACGATC
AACGTGTCGATCGTCGATCTGTCCTTCATCGCCGCGCGCGACACGACGGTCGAAGAAGTCAACGCGATCATGAAGGAAGC
GTCGGAAGGCTCGCTGAAGGGCATTCTCGGCTACAACCAGGCACCGCTGGTGTCGATCGACTTCAACCACAACCCGGCTT
CGTCGACGTTCGACGCCACGCTGACCAAGGTGTCGGGCCGTCTGGTGAAGGTGTCGAGCTGGTACGACAACGAGTGGGGC
TTCTCGAACCGCATGCTGGACACGGCTGTGGCGCTCGCTCACGCGAAGTAA

Upstream 100 bases:

>100_bases
GCTGATCCTGGACAAGCGTTGCCGTTCGCGTGCGAACGCGCGGCAACGCGGTCAGTCAGACGAACCTGGACGTATTTTTT
TAGCCATCAGGAGATAGACC

Downstream 100 bases:

>100_bases
ATCACGGCGCTTCGTGCGCTATGCCCGCCAAAGCCGGCTTTGAGCCGGCGGCGGCACAGGGCAAGCAAAGCCGCTCTACG
GAGTGGCTTTTTTTACGCCT

Product: glyceraldehyde-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTIRVAINGYGRIGRNTLRAFYENGKKHDIEIVAINDLGDARTNAHLTQYDTAHGKFPGEVSVDGDYLVVNGDKIRVLAN
RNPAELPWGELNVDVVMECTGFFTTKEKASAHIKGGAKKVIISAPGGKDVDATIVYGVNHHVLKASDTVISNASCTTNCL
APLVKPLNDKIGLVNGLMTTIHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAASAVGLVLPELNGKLDGYAIRVPTI
NVSIVDLSFIAARDTTVEEVNAIMKEASEGSLKGILGYNQAPLVSIDFNHNPASSTFDATLTKVSGRLVKVSSWYDNEWG
FSNRMLDTAVALAHAK

Sequences:

>Translated_336_residues
MTIRVAINGYGRIGRNTLRAFYENGKKHDIEIVAINDLGDARTNAHLTQYDTAHGKFPGEVSVDGDYLVVNGDKIRVLAN
RNPAELPWGELNVDVVMECTGFFTTKEKASAHIKGGAKKVIISAPGGKDVDATIVYGVNHHVLKASDTVISNASCTTNCL
APLVKPLNDKIGLVNGLMTTIHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAASAVGLVLPELNGKLDGYAIRVPTI
NVSIVDLSFIAARDTTVEEVNAIMKEASEGSLKGILGYNQAPLVSIDFNHNPASSTFDATLTKVSGRLVKVSSWYDNEWG
FSNRMLDTAVALAHAK
>Mature_335_residues
TIRVAINGYGRIGRNTLRAFYENGKKHDIEIVAINDLGDARTNAHLTQYDTAHGKFPGEVSVDGDYLVVNGDKIRVLANR
NPAELPWGELNVDVVMECTGFFTTKEKASAHIKGGAKKVIISAPGGKDVDATIVYGVNHHVLKASDTVISNASCTTNCLA
PLVKPLNDKIGLVNGLMTTIHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAASAVGLVLPELNGKLDGYAIRVPTIN
VSIVDLSFIAARDTTVEEVNAIMKEASEGSLKGILGYNQAPLVSIDFNHNPASSTFDATLTKVSGRLVKVSSWYDNEWGF
SNRMLDTAVALAHAK

Specific function: Could Play A Role In Pyridoxal 5'-Phosphate Synthesis. [C]

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7669492, Length=335, Percent_Identity=49.2537313432836, Blast_Score=303, Evalue=2e-82,
Organism=Homo sapiens, GI7657116, Length=330, Percent_Identity=42.1212121212121, Blast_Score=243, Evalue=2e-64,
Organism=Escherichia coli, GI1789295, Length=334, Percent_Identity=51.1976047904192, Blast_Score=369, Evalue=1e-103,
Organism=Escherichia coli, GI1788079, Length=329, Percent_Identity=52.2796352583587, Blast_Score=321, Evalue=4e-89,
Organism=Caenorhabditis elegans, GI17534677, Length=333, Percent_Identity=49.8498498498498, Blast_Score=300, Evalue=5e-82,
Organism=Caenorhabditis elegans, GI17534679, Length=333, Percent_Identity=49.8498498498498, Blast_Score=300, Evalue=9e-82,
Organism=Caenorhabditis elegans, GI32566163, Length=333, Percent_Identity=49.5495495495495, Blast_Score=289, Evalue=1e-78,
Organism=Caenorhabditis elegans, GI17568413, Length=333, Percent_Identity=49.5495495495495, Blast_Score=289, Evalue=1e-78,
Organism=Saccharomyces cerevisiae, GI6322468, Length=336, Percent_Identity=45.8333333333333, Blast_Score=297, Evalue=2e-81,
Organism=Saccharomyces cerevisiae, GI6321631, Length=338, Percent_Identity=46.4497041420118, Blast_Score=295, Evalue=1e-80,
Organism=Saccharomyces cerevisiae, GI6322409, Length=336, Percent_Identity=45.5357142857143, Blast_Score=292, Evalue=7e-80,
Organism=Drosophila melanogaster, GI85725000, Length=328, Percent_Identity=49.390243902439, Blast_Score=291, Evalue=5e-79,
Organism=Drosophila melanogaster, GI22023983, Length=328, Percent_Identity=49.390243902439, Blast_Score=291, Evalue=5e-79,
Organism=Drosophila melanogaster, GI17933600, Length=328, Percent_Identity=48.780487804878, Blast_Score=289, Evalue=2e-78,
Organism=Drosophila melanogaster, GI18110149, Length=328, Percent_Identity=48.780487804878, Blast_Score=289, Evalue=2e-78,
Organism=Drosophila melanogaster, GI19922412, Length=327, Percent_Identity=45.8715596330275, Blast_Score=270, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006424
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N [H]

EC number: =1.2.1.12 [H]

Molecular weight: Translated: 36199; Mature: 36068

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: PS00071 GAPDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRVAINGYGRIGRNTLRAFYENGKKHDIEIVAINDLGDARTNAHLTQYDTAHGKFPGE
CEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCE
VSVDGDYLVVNGDKIRVLANRNPAELPWGELNVDVVMECTGFFTTKEKASAHIKGGAKKV
EEECCCEEEEECCEEEEEECCCCCCCCCCCCCEEEEEEECCCEEECCCCCEEECCCCEEE
IISAPGGKDVDATIVYGVNHHVLKASDTVISNASCTTNCLAPLVKPLNDKIGLVNGLMTT
EEECCCCCCCCEEEEEECCCEEEECCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
IHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAASAVGLVLPELNGKLDGYAIRVPTI
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEE
NVSIVDLSFIAARDTTVEEVNAIMKEASEGSLKGILGYNQAPLVSIDFNHNPASSTFDAT
EEEEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCCCCCCHHHH
LTKVSGRLVKVSSWYDNEWGFSNRMLDTAVALAHAK
HEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TIRVAINGYGRIGRNTLRAFYENGKKHDIEIVAINDLGDARTNAHLTQYDTAHGKFPGE
EEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCE
VSVDGDYLVVNGDKIRVLANRNPAELPWGELNVDVVMECTGFFTTKEKASAHIKGGAKKV
EEECCCEEEEECCEEEEEECCCCCCCCCCCCCEEEEEEECCCEEECCCCCEEECCCCEEE
IISAPGGKDVDATIVYGVNHHVLKASDTVISNASCTTNCLAPLVKPLNDKIGLVNGLMTT
EEECCCCCCCCEEEEEECCCEEEECCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
IHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAASAVGLVLPELNGKLDGYAIRVPTI
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEE
NVSIVDLSFIAARDTTVEEVNAIMKEASEGSLKGILGYNQAPLVSIDFNHNPASSTFDAT
EEEEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCCCCCCHHHH
LTKVSGRLVKVSSWYDNEWGFSNRMLDTAVALAHAK
HEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7763137 [H]