Click here to switch to the map view.

The map label for this gene is alc2 [H]

Identifier: 91785210

GI number: 91785210

Start: 4256559

End: 4257569

Strand: Reverse

Name: alc2 [H]

Synonym: Bxe_A0569

Alternate gene names: 91785210

Gene position: 4257569-4256559 (Counterclockwise)

Preceding gene: 91785211

Following gene: 91785209

Centisome position: 86.96

GC content: 66.67

Gene sequence:

>1011_bases
ATGGCTAATCCGATCCTCGACCCCAACGCTCCCGCTTTCACCCGTCGCTACATGAACCTCGCCGACCCGCGTCTGGGCGC
GCAGGCGCTTTTTGCGAGCGACGAATTCTTCGCGCCGAAAGAACGCATGCTCGAGCCGCAGCCGGCGGTGTTCATCCCCG
GCAAATACGACGACCACGGCAAGTGGATGGACGGCTGGGAAACCCGCCGCAAGCGCACCACCGGCCACGACTACTGCGTG
ATCCGTCTCGCGCGCCCGGGCGTCGTGCACGGCGTGGATCTGGATACGAGCCACTTCACCGGCAACTTTCCGCCGGCCGC
GTCGATCGACGCCTGCTACGTGGAAGGCGATGTGCCGCCCGACAACGCCGACTGGCAAACCCTCGTGCCTGCGACCACGC
TGCAGGGCAACCAGCACCACTATGTCGATGTGAACGACACGCGCGCGTTCACCCATCTGCGCGTGAATCTGTACCCGGAC
GGCGGCCTCGCGCGCCTGCGCGCGTACGGCCAGCCGAAGCGCGATTGGGAGCGCGTGGAGCGCGGCACGCTGCTGGATCT
GGCCGCCATCGAGAACGGCGCCTATCTGGTCGCGGCGAACAACCAGCATTTCGGGCCGGCCTCGCAGATGCTGATGCCCG
GCCGTGGCATCAACATGGGCGACGGGTGGGAAACCCGGCGCCGCCGCGAGCCGGGCAACGATTGGGCGATCGTCGCGCTG
GCGCGGCCGGGCGTGATCCGCAAGATCGACGTAGATACGGCGCACTTCAAGGGCAACTTCCCGGACCGCTGTTCACTGCA
AGCCGCGTCGGTGACGGGCGGGACGGACGACTCGCTCGTCACGCAGGCGATGTTCTGGCCGGTGCTGCTCGGCGAGCAGA
AACTGCAGATGGACCACGTCCACACCTTCGCGGATAACCTCGCGTCACTGGGCCCGGTCACGCATGTGCGTTTCAATATC
TTTCCGGACGGCGGCGTGTCGCGCCTGCGCCTGTGGGGCGAAATCGCATAA

Upstream 100 bases:

>100_bases
CCAGATCGGCGCGCCAACGCAGCGCGCCTCCAGCGCCGGCAGATCCCCAGGAACGCCGGCTCTCCTTCACTTTTTCGCCG
CCTGACCGAGACTAGAGACT

Downstream 100 bases:

>100_bases
CGGGGCGGCGTCGATGAAGACATTGCAGATGGAACGGCTCACGCGCGCAGCTTTTGCGCCGTTCGGCGACGTCATCGAGC
TGGAGGGCGCGCGTCATTTC

Product: allantoicase

Products: NA

Alternate protein names: Allantoate amidinohydrolase 2 [H]

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MANPILDPNAPAFTRRYMNLADPRLGAQALFASDEFFAPKERMLEPQPAVFIPGKYDDHGKWMDGWETRRKRTTGHDYCV
IRLARPGVVHGVDLDTSHFTGNFPPAASIDACYVEGDVPPDNADWQTLVPATTLQGNQHHYVDVNDTRAFTHLRVNLYPD
GGLARLRAYGQPKRDWERVERGTLLDLAAIENGAYLVAANNQHFGPASQMLMPGRGINMGDGWETRRRREPGNDWAIVAL
ARPGVIRKIDVDTAHFKGNFPDRCSLQAASVTGGTDDSLVTQAMFWPVLLGEQKLQMDHVHTFADNLASLGPVTHVRFNI
FPDGGVSRLRLWGEIA

Sequences:

>Translated_336_residues
MANPILDPNAPAFTRRYMNLADPRLGAQALFASDEFFAPKERMLEPQPAVFIPGKYDDHGKWMDGWETRRKRTTGHDYCV
IRLARPGVVHGVDLDTSHFTGNFPPAASIDACYVEGDVPPDNADWQTLVPATTLQGNQHHYVDVNDTRAFTHLRVNLYPD
GGLARLRAYGQPKRDWERVERGTLLDLAAIENGAYLVAANNQHFGPASQMLMPGRGINMGDGWETRRRREPGNDWAIVAL
ARPGVIRKIDVDTAHFKGNFPDRCSLQAASVTGGTDDSLVTQAMFWPVLLGEQKLQMDHVHTFADNLASLGPVTHVRFNI
FPDGGVSRLRLWGEIA
>Mature_335_residues
ANPILDPNAPAFTRRYMNLADPRLGAQALFASDEFFAPKERMLEPQPAVFIPGKYDDHGKWMDGWETRRKRTTGHDYCVI
RLARPGVVHGVDLDTSHFTGNFPPAASIDACYVEGDVPPDNADWQTLVPATTLQGNQHHYVDVNDTRAFTHLRVNLYPDG
GLARLRAYGQPKRDWERVERGTLLDLAAIENGAYLVAANNQHFGPASQMLMPGRGINMGDGWETRRRREPGNDWAIVALA
RPGVIRKIDVDTAHFKGNFPDRCSLQAASVTGGTDDSLVTQAMFWPVLLGEQKLQMDHVHTFADNLASLGPVTHVRFNIF
PDGGVSRLRLWGEIA

Specific function: Unknown

COG id: COG4266

COG function: function code F; Allantoicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the allantoicase family [H]

Homologues:

Organism=Homo sapiens, GI144953901, Length=365, Percent_Identity=38.3561643835616, Blast_Score=250, Evalue=1e-66,
Organism=Saccharomyces cerevisiae, GI6322220, Length=327, Percent_Identity=36.697247706422, Blast_Score=215, Evalue=7e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005164
- InterPro:   IPR015908
- InterPro:   IPR008979 [H]

Pfam domain/function: PF03561 Allantoicase [H]

EC number: =3.5.3.4 [H]

Molecular weight: Translated: 37392; Mature: 37260

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANPILDPNAPAFTRRYMNLADPRLGAQALFASDEFFAPKERMLEPQPAVFIPGKYDDHG
CCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHCCCCCCCEEECCCCCCCC
KWMDGWETRRKRTTGHDYCVIRLARPGVVHGVDLDTSHFTGNFPPAASIDACYVEGDVPP
CCCCCHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCC
DNADWQTLVPATTLQGNQHHYVDVNDTRAFTHLRVNLYPDGGLARLRAYGQPKRDWERVE
CCCCCEEECCEEEECCCCEEEEECCCCEEEEEEEEEEECCCCHHHHHHCCCCHHHHHHHH
RGTLLDLAAIENGAYLVAANNQHFGPASQMLMPGRGINMGDGWETRRRREPGNDWAIVAL
CCCEEEEEEECCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCCEEEEEE
ARPGVIRKIDVDTAHFKGNFPDRCSLQAASVTGGTDDSLVTQAMFWPVLLGEQKLQMDHV
ECCCEEEEEECCCCEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHH
HTFADNLASLGPVTHVRFNIFPDGGVSRLRLWGEIA
HHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEEECC
>Mature Secondary Structure 
ANPILDPNAPAFTRRYMNLADPRLGAQALFASDEFFAPKERMLEPQPAVFIPGKYDDHG
CCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHCCCCCCCEEECCCCCCCC
KWMDGWETRRKRTTGHDYCVIRLARPGVVHGVDLDTSHFTGNFPPAASIDACYVEGDVPP
CCCCCHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCC
DNADWQTLVPATTLQGNQHHYVDVNDTRAFTHLRVNLYPDGGLARLRAYGQPKRDWERVE
CCCCCEEECCEEEECCCCEEEEECCCCEEEEEEEEEEECCCCHHHHHHCCCCHHHHHHHH
RGTLLDLAAIENGAYLVAANNQHFGPASQMLMPGRGINMGDGWETRRRREPGNDWAIVAL
CCCEEEEEEECCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCCEEEEEE
ARPGVIRKIDVDTAHFKGNFPDRCSLQAASVTGGTDDSLVTQAMFWPVLLGEQKLQMDHV
ECCCEEEEEECCCCEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHH
HTFADNLASLGPVTHVRFNIFPDGGVSRLRLWGEIA
HHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA