| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is erpA1
Identifier: 91785171
GI number: 91785171
Start: 4207141
End: 4207506
Strand: Reverse
Name: erpA1
Synonym: Bxe_A0609
Alternate gene names: 91785171
Gene position: 4207506-4207141 (Counterclockwise)
Preceding gene: 91785172
Following gene: 91785169
Centisome position: 85.94
GC content: 55.74
Gene sequence:
>366_bases ATGAACGCAGTCACCGATACACCCGTGACCGAGATGCCCGCCCCCTTCGTTTTTACCGACGCAGCGGCTGACAAGGTCAA GCAACTGATCGAAGAAGAAGGCAATGCGGACCTCAAACTGCGCGTTTTCGTGCAGGGCGGCGGCTGCTCGGGCTTTCAGT ACGGTTTTACGTTTGACGAAGCCGTCAACGAAGACGACACCGTCATGAACAAGAGCGGCGTCCAGCTGCTGATCGATTCG ATGAGCTACCAGTATTTGGTGGGCGCTGAGATCGACTACAAGGACGATATCAACGGCGCTCAGTTCGTCATCAAGAACCC GAATGCTACGACCACCTGTGGTTGCGGCTCATCGTTCTCGGTGTGA
Upstream 100 bases:
>100_bases ATCCATTGATTCTCTGGAAGAACCCATTGACTTTGTGGGCTTCGGCACGATATCGAGATCAGCCCTACAATAGCGGTTAG AAGCTTTTTGGAGAGTTCGA
Downstream 100 bases:
>100_bases CGACGGGTTGTTGAGCAGTTGATTGTGGCAAACGGGGCTTCGGCCCCGTTTCTTATTGCCTGCGCCGAAATCCGCGCCAC GCTCAGCTCAGCGCGGGTAG
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MNAVTDTPVTEMPAPFVFTDAAADKVKQLIEEEGNADLKLRVFVQGGGCSGFQYGFTFDEAVNEDDTVMNKSGVQLLIDS MSYQYLVGAEIDYKDDINGAQFVIKNPNATTTCGCGSSFSV
Sequences:
>Translated_121_residues MNAVTDTPVTEMPAPFVFTDAAADKVKQLIEEEGNADLKLRVFVQGGGCSGFQYGFTFDEAVNEDDTVMNKSGVQLLIDS MSYQYLVGAEIDYKDDINGAQFVIKNPNATTTCGCGSSFSV >Mature_121_residues MNAVTDTPVTEMPAPFVFTDAAADKVKQLIEEEGNADLKLRVFVQGGGCSGFQYGFTFDEAVNEDDTVMNKSGVQLLIDS MSYQYLVGAEIDYKDDINGAQFVIKNPNATTTCGCGSSFSV
Specific function: Required for insertion of 4Fe-4S clusters (Potential)
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family
Homologues:
Organism=Homo sapiens, GI160420328, Length=98, Percent_Identity=42.8571428571429, Blast_Score=86, Evalue=8e-18, Organism=Homo sapiens, GI52426768, Length=121, Percent_Identity=30.5785123966942, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1786351, Length=111, Percent_Identity=59.4594594594595, Blast_Score=148, Evalue=1e-37, Organism=Escherichia coli, GI1788877, Length=104, Percent_Identity=33.6538461538462, Blast_Score=66, Evalue=7e-13, Organism=Caenorhabditis elegans, GI71998452, Length=105, Percent_Identity=37.1428571428571, Blast_Score=79, Evalue=4e-16, Organism=Caenorhabditis elegans, GI25146411, Length=114, Percent_Identity=29.8245614035088, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193209025, Length=112, Percent_Identity=30.3571428571429, Blast_Score=73, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6323001, Length=82, Percent_Identity=40.2439024390244, Blast_Score=73, Evalue=1e-14, Organism=Drosophila melanogaster, GI24649697, Length=83, Percent_Identity=46.9879518072289, Blast_Score=83, Evalue=3e-17, Organism=Drosophila melanogaster, GI24642263, Length=121, Percent_Identity=30.5785123966942, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ERPA1_BURXL (Q13UB4)
Other databases:
- EMBL: CP000270 - RefSeq: YP_560377.1 - ProteinModelPortal: Q13UB4 - SMR: Q13UB4 - GeneID: 4005802 - GenomeReviews: CP000270_GR - KEGG: bxe:Bxe_A0609 - HOGENOM: HBG730174 - OMA: TFDDQIN - ProtClustDB: PRK13623 - HAMAP: MF_01380 - InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 - Gene3D: G3DSA:2.60.300.12 - PANTHER: PTHR10072 - TIGRFAMs: TIGR00049
Pfam domain/function: PF01521 Fe-S_biosyn; SSF89360 HesB_yadR_yfhF-like
EC number: NA
Molecular weight: Translated: 13026; Mature: 13026
Theoretical pI: Translated: 3.82; Mature: 3.82
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVTDTPVTEMPAPFVFTDAAADKVKQLIEEEGNADLKLRVFVQGGGCSGFQYGFTFDE CCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEHHH AVNEDDTVMNKSGVQLLIDSMSYQYLVGAEIDYKDDINGAQFVIKNPNATTTCGCGSSFS HCCCCCCEECCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEECCCCCCC V C >Mature Secondary Structure MNAVTDTPVTEMPAPFVFTDAAADKVKQLIEEEGNADLKLRVFVQGGGCSGFQYGFTFDE CCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEHHH AVNEDDTVMNKSGVQLLIDSMSYQYLVGAEIDYKDDINGAQFVIKNPNATTTCGCGSSFS HCCCCCCEECCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEECCCCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA