| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785102
Identifier: 91785102
GI number: 91785102
Start: 4134210
End: 4135994
Strand: Reverse
Name: 91785102
Synonym: Bxe_A0678
Alternate gene names: NA
Gene position: 4135994-4134210 (Counterclockwise)
Preceding gene: 91785103
Following gene: 91785100
Centisome position: 84.48
GC content: 62.58
Gene sequence:
>1785_bases ATGCCCACCCCTTTCGCGCGCTACCTGTCCTTCATTCTGCTGGCTCTCGCGTTGGTGCTGCCTTACGCAGTTGTCAACCA TACTTATCCGATTCCGACGTTTTACGCTGAATTCACGGCACTCGCGCTGTATCTGCTGACCGGCGCGGGCGTCGTGCTGC TGGTGGCGAGCGCGAGGCCGCGCGTGACGTTCGCGTCGCCGACGGTCGCGCTGGTGCCGTTGCTGTTCGGGCTGCTGCTG GTGGCGCAATCGGTGGTGTTGCCGGTTTCGCAGCCGTCGATGAACTGGCTCGGCGGCGGCTATCTGCTGGCGGCCTTCAT GGCGACGCATGCTGGTTATGGTTTCACGCGGGCCAGGCTCAACGAGACCGCGTTGCGCTGGGCGGCCGGGGCGTTGATCG TCGGCGGGCTGTTTGCGGTGTTCTGCCAGATCATTCAGCTGTTTCACCTCGAAACGCGCGTTTCGCCGCTCGTCGTTGCC TATAACGTGACCGTCGAGCGCCGGCCGTTCGGCAATATGGCCCAGGCCAATCATCTCGCTACCTATATCGCATTTGCGAT GGCGGGCGCACTGTTCCTCGTGCAGACGCGGCGGATCGCCGTCAGCATCTGGTTCCTCGTGTCGACGATTTTCGCGGTTG GCCTTGCGCTGACCGTCTCGCGCGGGCCCTGGCTGCAAATGGGCGTGATCGTGGCGGCGGGTTTCTGGATGGCATTCGCG CAGACCCGCAATCAGTTGCAGCTACGCCGCAGCAATCGCGAGTGGATCATTCCGATTGTGCTGGCCGTGCTATTTTTCGT GGTCAACGCGCTGATTCGCTGGGCCAACGTTCGCTACCACCTGGAGCTCGGACAGTCCGCCGCGGAACGCTTCAAGGACG CCGGCCAGATCGCGCCGCGTCTCGCGCTGTGGAAGTACGGCTGGACTATGTTCAGAACGCATCCGCTGCTGGGTGTCGGT TGGGGCGAATTTCCGAGCTACCAGTACGAGTTTGTGAAGTCGCTCGGCGCCGTCGAGATCGCCAACAATTCGCACGACAT CTTCATCGACCTGCTCGCGAAGACTGGCTTGCTCGGCCTCGCGATCGTGCTGTTCGGCCTGATCACATGGCTCGTGCGGG TGGTGCGCGCACCGCAAAGCTCGGCGCGCGTGTTCGGCATTGCGCTGATCGGTGTGCTGGTCATGCACGCGCTGGTCGAA TATCCGCAGCAGTACATGTTCTTCCTGTTGCCGGCAATGTTCGTGTTCGGCTTGCTGGAAACGCGGCCGCTGCGCCTCGT GCCCGCACGCGTGTCGTTCGGCGCGTTTGCCGTGGTGGTGTTCGGCGGGCTGGCGGCGCTGTATCCGGTGTATCGCGATT ACGCGCGCGCCGAGGTGTTGTACTACGGCTCGCGTCCAGCCGAGCAGTATCGTGCGGATCCGTCGTTCCTGTTCCAGGCG TGGGGCGAGTATGGAATGGCGACGCTTTTGCCGATGAACCCGATGGACCTGCAGCACAAGCTCGCCATGCACAGACAGGC GATTGCGCTGCTGCCGGGCGAAACCGTGTTGCGCCGCTATGCGGTGCTGCAGGCGTTGAGCGGCGACCAGAAGGCGGCGT TCGACACTGTCGAACGACTGAAGATTTTCGCCGGGGAACTGAAGGACTGGCCGTCGCAACTGAGCTATCTGTACGAACTC TGCGACGAGCAGAAAACGCTGACCGGTTTCAAGGCGGAACTGGTCAAGCGCTACGGTATGCCGCCAGGCGACATCAATGA AGACGACGACAGCGACGAGGATTGA
Upstream 100 bases:
>100_bases ACGTAAAAGGCTGATTTCCGGGATATTTCAGCCCGGCCGGCGCACAGCAGGAGAATTTTTTTGTATAGTGCGCCGGTTGC TGACGCCCACCGGTTACTCG
Downstream 100 bases:
>100_bases GCCGCTCGCTCGCTATCTTCGTTTCAAAGGCGTGTGAAGGTGAAGCGGGGCGACGGTTCTGAAGGTCGTCAACCCGCCAC CCAATCTCCCGACTTGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: O-Antigen Polymerase Family Protein; Lipid A Core; O-Antigen Ligase; Lipopolysaccharide Biosynthesis Protein; Integral Membrane Protein; O-Antigen Polymerase Family; O-Antigen Ligase And Related S
Number of amino acids: Translated: 594; Mature: 593
Protein sequence:
>594_residues MPTPFARYLSFILLALALVLPYAVVNHTYPIPTFYAEFTALALYLLTGAGVVLLVASARPRVTFASPTVALVPLLFGLLL VAQSVVLPVSQPSMNWLGGGYLLAAFMATHAGYGFTRARLNETALRWAAGALIVGGLFAVFCQIIQLFHLETRVSPLVVA YNVTVERRPFGNMAQANHLATYIAFAMAGALFLVQTRRIAVSIWFLVSTIFAVGLALTVSRGPWLQMGVIVAAGFWMAFA QTRNQLQLRRSNREWIIPIVLAVLFFVVNALIRWANVRYHLELGQSAAERFKDAGQIAPRLALWKYGWTMFRTHPLLGVG WGEFPSYQYEFVKSLGAVEIANNSHDIFIDLLAKTGLLGLAIVLFGLITWLVRVVRAPQSSARVFGIALIGVLVMHALVE YPQQYMFFLLPAMFVFGLLETRPLRLVPARVSFGAFAVVVFGGLAALYPVYRDYARAEVLYYGSRPAEQYRADPSFLFQA WGEYGMATLLPMNPMDLQHKLAMHRQAIALLPGETVLRRYAVLQALSGDQKAAFDTVERLKIFAGELKDWPSQLSYLYEL CDEQKTLTGFKAELVKRYGMPPGDINEDDDSDED
Sequences:
>Translated_594_residues MPTPFARYLSFILLALALVLPYAVVNHTYPIPTFYAEFTALALYLLTGAGVVLLVASARPRVTFASPTVALVPLLFGLLL VAQSVVLPVSQPSMNWLGGGYLLAAFMATHAGYGFTRARLNETALRWAAGALIVGGLFAVFCQIIQLFHLETRVSPLVVA YNVTVERRPFGNMAQANHLATYIAFAMAGALFLVQTRRIAVSIWFLVSTIFAVGLALTVSRGPWLQMGVIVAAGFWMAFA QTRNQLQLRRSNREWIIPIVLAVLFFVVNALIRWANVRYHLELGQSAAERFKDAGQIAPRLALWKYGWTMFRTHPLLGVG WGEFPSYQYEFVKSLGAVEIANNSHDIFIDLLAKTGLLGLAIVLFGLITWLVRVVRAPQSSARVFGIALIGVLVMHALVE YPQQYMFFLLPAMFVFGLLETRPLRLVPARVSFGAFAVVVFGGLAALYPVYRDYARAEVLYYGSRPAEQYRADPSFLFQA WGEYGMATLLPMNPMDLQHKLAMHRQAIALLPGETVLRRYAVLQALSGDQKAAFDTVERLKIFAGELKDWPSQLSYLYEL CDEQKTLTGFKAELVKRYGMPPGDINEDDDSDED >Mature_593_residues PTPFARYLSFILLALALVLPYAVVNHTYPIPTFYAEFTALALYLLTGAGVVLLVASARPRVTFASPTVALVPLLFGLLLV AQSVVLPVSQPSMNWLGGGYLLAAFMATHAGYGFTRARLNETALRWAAGALIVGGLFAVFCQIIQLFHLETRVSPLVVAY NVTVERRPFGNMAQANHLATYIAFAMAGALFLVQTRRIAVSIWFLVSTIFAVGLALTVSRGPWLQMGVIVAAGFWMAFAQ TRNQLQLRRSNREWIIPIVLAVLFFVVNALIRWANVRYHLELGQSAAERFKDAGQIAPRLALWKYGWTMFRTHPLLGVGW GEFPSYQYEFVKSLGAVEIANNSHDIFIDLLAKTGLLGLAIVLFGLITWLVRVVRAPQSSARVFGIALIGVLVMHALVEY PQQYMFFLLPAMFVFGLLETRPLRLVPARVSFGAFAVVVFGGLAALYPVYRDYARAEVLYYGSRPAEQYRADPSFLFQAW GEYGMATLLPMNPMDLQHKLAMHRQAIALLPGETVLRRYAVLQALSGDQKAAFDTVERLKIFAGELKDWPSQLSYLYELC DEQKTLTGFKAELVKRYGMPPGDINEDDDSDED
Specific function: Unknown
COG id: COG3307
COG function: function code M; Lipid A core - O-antigen ligase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66072; Mature: 65941
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPFARYLSFILLALALVLPYAVVNHTYPIPTFYAEFTALALYLLTGAGVVLLVASARP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC RVTFASPTVALVPLLFGLLLVAQSVVLPVSQPSMNWLGGGYLLAAFMATHAGYGFTRARL CEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH NETALRWAAGALIVGGLFAVFCQIIQLFHLETRVSPLVVAYNVTVERRPFGNMAQANHLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHH TYIAFAMAGALFLVQTRRIAVSIWFLVSTIFAVGLALTVSRGPWLQMGVIVAAGFWMAFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHH QTRNQLQLRRSNREWIIPIVLAVLFFVVNALIRWANVRYHLELGQSAAERFKDAGQIAPR HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCEEEEHHCHHHHHHHHHHHHHHHH LALWKYGWTMFRTHPLLGVGWGEFPSYQYEFVKSLGAVEIANNSHDIFIDLLAKTGLLGL HHHHHHCCHHHCCCCCEECCCCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHCCHHHH AIVLFGLITWLVRVVRAPQSSARVFGIALIGVLVMHALVEYPQQYMFFLLPAMFVFGLLE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TRPLRLVPARVSFGAFAVVVFGGLAALYPVYRDYARAEVLYYGSRPAEQYRADPSFLFQA CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHCCCHHHHHHH WGEYGMATLLPMNPMDLQHKLAMHRQAIALLPGETVLRRYAVLQALSGDQKAAFDTVERL HHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH KIFAGELKDWPSQLSYLYELCDEQKTLTGFKAELVKRYGMPPGDINEDDDSDED HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PTPFARYLSFILLALALVLPYAVVNHTYPIPTFYAEFTALALYLLTGAGVVLLVASARP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC RVTFASPTVALVPLLFGLLLVAQSVVLPVSQPSMNWLGGGYLLAAFMATHAGYGFTRARL CEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH NETALRWAAGALIVGGLFAVFCQIIQLFHLETRVSPLVVAYNVTVERRPFGNMAQANHLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHH TYIAFAMAGALFLVQTRRIAVSIWFLVSTIFAVGLALTVSRGPWLQMGVIVAAGFWMAFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHH QTRNQLQLRRSNREWIIPIVLAVLFFVVNALIRWANVRYHLELGQSAAERFKDAGQIAPR HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCEEEEHHCHHHHHHHHHHHHHHHH LALWKYGWTMFRTHPLLGVGWGEFPSYQYEFVKSLGAVEIANNSHDIFIDLLAKTGLLGL HHHHHHCCHHHCCCCCEECCCCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHCCHHHH AIVLFGLITWLVRVVRAPQSSARVFGIALIGVLVMHALVEYPQQYMFFLLPAMFVFGLLE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TRPLRLVPARVSFGAFAVVVFGGLAALYPVYRDYARAEVLYYGSRPAEQYRADPSFLFQA CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHCCCHHHHHHH WGEYGMATLLPMNPMDLQHKLAMHRQAIALLPGETVLRRYAVLQALSGDQKAAFDTVERL HHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH KIFAGELKDWPSQLSYLYELCDEQKTLTGFKAELVKRYGMPPGDINEDDDSDED HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA