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The map label for this gene is degP [H]

Identifier: 91785079

GI number: 91785079

Start: 4107979

End: 4109490

Strand: Reverse

Name: degP [H]

Synonym: Bxe_A0701

Alternate gene names: 91785079

Gene position: 4109490-4107979 (Counterclockwise)

Preceding gene: 91785080

Following gene: 91785078

Centisome position: 83.94

GC content: 65.08

Gene sequence:

>1512_bases
ATGAACGCGAAAACCTTGTCCCGCAGCGCTGTTGCAGTGGCTGTCGCCGTAGCGCTTTCCGCCGGCTATGTGGCGGGGCA
TCGCGACGTGCCCACGCCGCAGGTGATTACCCCGGTGCAAGCCGCGATGATGCCCGCCGAAGCCGCCGCCAAAACCGGCA
TTCCCGATTTCTCCGGCCTCGTCGAAACCTATGGGCCGGCCGTCGTCAACATCAGCGCGAAGTACGTCGTCAAGCAGACG
GCGCTGCGCGGTAATCCCGGCAACGGCGGCGGCAACCAGTTGCCGATCGATCCCAGCGATCCGTTCTACCAGTTCTACAA
GCACTTCTTCGGCGGCATGCCGGGCATGCAGGGCGGCGACGGCGGCGATGCGCCCGATCAGCCGAGCGCGAGCCTGGGCT
CAGGATTCATCGTCAGCAACGATGGCTACATCCTGACCAATGCGCACGTGGTGGACGGCGCCAACGTCGTCACCGTGAAG
CTGACCGACAAGCGCGAATTCCGCGCGAAGGTGGTGGGCGCCGACAAGCAGTCCGACGTCGCCGTGCTGAAGATCGACGC
GAGCAACCTGCCGACCGTGAAGATCGGCGATCCGCGTCAGAGCAAGGTCGGCCAGTGGGTCGTCGCGATCGGTTCGCCTT
ACGGTTTCGACAACACGGTGACCTCGGGCATCATCAGCGCCAAGTCGCGCTCGCTGCCTAACGAAAACTACACGCCGTTC
ATTCAGACCGACGTGCCGGTGAACCCGGGCAACTCGGGCGGCCCGCTCTTCAATCTGCAAGGCGAAGTGATCGGCATCAA
TTCGATGATCTATTCGCAAACGGGCGGCTTTCAGGGCCTTTCGTTCGCCATCCCGATCAATGAAGCGATCAAGGTGAAGG
ACGACATCGTCAAGACCGGCCACGTGAGCCGCGGCCGCCTCGGCGTGGCGGTGCAGGGCATGAACCAGACGCTCGCCGAT
TCGTTCGGCATGCAGAAGCCGCAAGGCGCGCTGGTGAGCTCGGTCGATCCGGGCGGCCCCGCGGCCAAGGGCGGTTTGCA
GCCGGGCGACGTGATTCTGTCGGTGAACGGCGAACCGGTCGGCGATTCGGCCGATCTGCCGTCGCAGGTCGCGGGTCTGG
CGCCGGGCAGCTCGGCAACCGTGCAGGTGTGGCGCGACAAGGCCACCAAGGACCTGAAGGTGACCATCGGTTCGTTGTCG
GATGCGAAGGTTGCCTCGGACAAGGCCGATCAACCGACCCAGTTGCAAGGCCGGCTCGGCGTGGCGGTGCGGCCGTTGAC
GCCGGAAGAGAAGAGCGGTGCGTCGGTGTCGCATGGTCTGCTGGTGCAGCAGTCGGGCGGCGCGGCGGAAAGCGCCGGCA
TCCAGCCGGGCGACGTGATTCTGGCCGTCAACGGCCGGCCCATTTCGAGCGTCGACCAGTTGAAGCAGATGATCGCCAGT
GCCGGCAACAGCATCGCGTTGCTGATCCAGCGCGACAACGCGCAGATCTTCGTGCCGGTCGATCTGGGCTGA

Upstream 100 bases:

>100_bases
AACAGGACGGAAGCGATCTGTCGCTGCTTAAGACTCTTTTAAGCGATGCGACGTACTCTTCGAGACATCCAAAGTCTCTT
CTCCCAGTCAGGAGTACACG

Downstream 100 bases:

>100_bases
GCAGAAGGCGTGCGCGCCGGACGAACCGATTGGCGGTTTGACCGACGGTCTTGCTGGTCCGCCCGCGAATTGAAGTAATG
GTTGCCGGCCCGTTGCATTT

Product: serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MNAKTLSRSAVAVAVAVALSAGYVAGHRDVPTPQVITPVQAAMMPAEAAAKTGIPDFSGLVETYGPAVVNISAKYVVKQT
ALRGNPGNGGGNQLPIDPSDPFYQFYKHFFGGMPGMQGGDGGDAPDQPSASLGSGFIVSNDGYILTNAHVVDGANVVTVK
LTDKREFRAKVVGADKQSDVAVLKIDASNLPTVKIGDPRQSKVGQWVVAIGSPYGFDNTVTSGIISAKSRSLPNENYTPF
IQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPINEAIKVKDDIVKTGHVSRGRLGVAVQGMNQTLAD
SFGMQKPQGALVSSVDPGGPAAKGGLQPGDVILSVNGEPVGDSADLPSQVAGLAPGSSATVQVWRDKATKDLKVTIGSLS
DAKVASDKADQPTQLQGRLGVAVRPLTPEEKSGASVSHGLLVQQSGGAAESAGIQPGDVILAVNGRPISSVDQLKQMIAS
AGNSIALLIQRDNAQIFVPVDLG

Sequences:

>Translated_503_residues
MNAKTLSRSAVAVAVAVALSAGYVAGHRDVPTPQVITPVQAAMMPAEAAAKTGIPDFSGLVETYGPAVVNISAKYVVKQT
ALRGNPGNGGGNQLPIDPSDPFYQFYKHFFGGMPGMQGGDGGDAPDQPSASLGSGFIVSNDGYILTNAHVVDGANVVTVK
LTDKREFRAKVVGADKQSDVAVLKIDASNLPTVKIGDPRQSKVGQWVVAIGSPYGFDNTVTSGIISAKSRSLPNENYTPF
IQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPINEAIKVKDDIVKTGHVSRGRLGVAVQGMNQTLAD
SFGMQKPQGALVSSVDPGGPAAKGGLQPGDVILSVNGEPVGDSADLPSQVAGLAPGSSATVQVWRDKATKDLKVTIGSLS
DAKVASDKADQPTQLQGRLGVAVRPLTPEEKSGASVSHGLLVQQSGGAAESAGIQPGDVILAVNGRPISSVDQLKQMIAS
AGNSIALLIQRDNAQIFVPVDLG
>Mature_503_residues
MNAKTLSRSAVAVAVAVALSAGYVAGHRDVPTPQVITPVQAAMMPAEAAAKTGIPDFSGLVETYGPAVVNISAKYVVKQT
ALRGNPGNGGGNQLPIDPSDPFYQFYKHFFGGMPGMQGGDGGDAPDQPSASLGSGFIVSNDGYILTNAHVVDGANVVTVK
LTDKREFRAKVVGADKQSDVAVLKIDASNLPTVKIGDPRQSKVGQWVVAIGSPYGFDNTVTSGIISAKSRSLPNENYTPF
IQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPINEAIKVKDDIVKTGHVSRGRLGVAVQGMNQTLAD
SFGMQKPQGALVSSVDPGGPAAKGGLQPGDVILSVNGEPVGDSADLPSQVAGLAPGSSATVQVWRDKATKDLKVTIGSLS
DAKVASDKADQPTQLQGRLGVAVRPLTPEEKSGASVSHGLLVQQSGGAAESAGIQPGDVILAVNGRPISSVDQLKQMIAS
AGNSIALLIQRDNAQIFVPVDLG

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PDZ (DHR) domains [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=286, Percent_Identity=36.013986013986, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI22129776, Length=267, Percent_Identity=37.0786516853933, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI7019477, Length=281, Percent_Identity=36.6548042704626, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI24308541, Length=252, Percent_Identity=35.3174603174603, Blast_Score=140, Evalue=4e-33,
Organism=Escherichia coli, GI1789629, Length=511, Percent_Identity=33.4637964774951, Blast_Score=248, Evalue=8e-67,
Organism=Escherichia coli, GI1786356, Length=373, Percent_Identity=39.4101876675603, Blast_Score=238, Evalue=7e-64,
Organism=Escherichia coli, GI1789630, Length=271, Percent_Identity=41.3284132841328, Blast_Score=189, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24646839, Length=295, Percent_Identity=36.9491525423729, Blast_Score=164, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR011782
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 51590; Mature: 51590

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKTLSRSAVAVAVAVALSAGYVAGHRDVPTPQVITPVQAAMMPAEAAAKTGIPDFSGL
CCCCHHCHHHHHHHHHHHHHCCEEECCCCCCCCHHCCCHHHHHCCHHHHHHCCCCCHHHH
VETYGPAVVNISAKYVVKQTALRGNPGNGGGNQLPIDPSDPFYQFYKHFFGGMPGMQGGD
HHHCCCEEEEEEHHEEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
GGDAPDQPSASLGSGFIVSNDGYILTNAHVVDGANVVTVKLTDKREFRAKVVGADKQSDV
CCCCCCCCCCCCCCCEEEECCCEEEEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCE
AVLKIDASNLPTVKIGDPRQSKVGQWVVAIGSPYGFDNTVTSGIISAKSRSLPNENYTPF
EEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
IQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPINEAIKVKDDIVKTG
EEECCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCEEEEEECCCCEEEHHHHHHCC
HVSRGRLGVAVQGMNQTLADSFGMQKPQGALVSSVDPGGPAAKGGLQPGDVILSVNGEPV
CCCCCEEEEEEECCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCC
GDSADLPSQVAGLAPGSSATVQVWRDKATKDLKVTIGSLSDAKVASDKADQPTQLQGRLG
CCCCCCCHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCC
VAVRPLTPEEKSGASVSHGLLVQQSGGAAESAGIQPGDVILAVNGRPISSVDQLKQMIAS
EEEECCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH
AGNSIALLIQRDNAQIFVPVDLG
CCCEEEEEEEECCCEEEEEECCC
>Mature Secondary Structure
MNAKTLSRSAVAVAVAVALSAGYVAGHRDVPTPQVITPVQAAMMPAEAAAKTGIPDFSGL
CCCCHHCHHHHHHHHHHHHHCCEEECCCCCCCCHHCCCHHHHHCCHHHHHHCCCCCHHHH
VETYGPAVVNISAKYVVKQTALRGNPGNGGGNQLPIDPSDPFYQFYKHFFGGMPGMQGGD
HHHCCCEEEEEEHHEEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
GGDAPDQPSASLGSGFIVSNDGYILTNAHVVDGANVVTVKLTDKREFRAKVVGADKQSDV
CCCCCCCCCCCCCCCEEEECCCEEEEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCE
AVLKIDASNLPTVKIGDPRQSKVGQWVVAIGSPYGFDNTVTSGIISAKSRSLPNENYTPF
EEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
IQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPINEAIKVKDDIVKTG
EEECCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCEEEEEECCCCEEEHHHHHHCC
HVSRGRLGVAVQGMNQTLADSFGMQKPQGALVSSVDPGGPAAKGGLQPGDVILSVNGEPV
CCCCCEEEEEEECCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCC
GDSADLPSQVAGLAPGSSATVQVWRDKATKDLKVTIGSLSDAKVASDKADQPTQLQGRLG
CCCCCCCHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCC
VAVRPLTPEEKSGASVSHGLLVQQSGGAAESAGIQPGDVILAVNGRPISSVDQLKQMIAS
EEEECCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH
AGNSIALLIQRDNAQIFVPVDLG
CCCEEEEEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7861951 [H]