| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is iaaA [H]
Identifier: 91784946
GI number: 91784946
Start: 3958075
End: 3959067
Strand: Reverse
Name: iaaA [H]
Synonym: Bxe_A0834
Alternate gene names: 91784946
Gene position: 3959067-3958075 (Counterclockwise)
Preceding gene: 91784947
Following gene: 91784945
Centisome position: 80.87
GC content: 68.58
Gene sequence:
>993_bases ATGAACTCCAACGCAGTCATTGCCATTCATGGCGGAGCAGGGACGATCCTGCGCGCGTCGATGTCGGCCAGCGCCGAAGC CGACTATCACGCCGCCTTGCATGCGGTGCTGAGCGCCGGCCAGCGCGTGCTTGCCGAGGGCGGCAGCGCACTCGACGCCG TCAGCGAGGCCGTGCGCCTGCTCGAAGACTGCCCGCTCTTCAACGCGGGCCGCGGCGCGGTTTTTACGGCGGCGGGCACG CACGAACTCGACGCCGCGATCATGGACGGCCGTACGCTCGAAGCCGGCGCGATCTGCTGCGTGAAGCGCGTGCGCAATCC GGTTCTGGCCGCGCGCCGCGTGCTCGAAGGCAGCGAGCATGTGCTGTTCACGGGCGAAGGTGCGGAAGCGTTCGCCGCCG CGCAAGGGCTCGAATTGGTCGAGCCTGAGTATTTCCATACCGAAGCGCGCCATCGTCAATGGCTGCTCGCGCGCGATCAG CAGCGCGCCATGCTCGATCACGACGGCGCCACGCTCGCCGCCGCGCCGGCTTCGAACGACGACGATCCCACGCCGCATGA ACCAATCGATCCGAACCGCAAGTTCGGCACGGTCGGCGCGGTCGCGCTCGATCGGCACGGCCACGTGGCGGCGGCGACCT CGACGGGCGGCGTCACCAACAAGCAGGTCGGCCGGGTCGGCGATGCGCCGCTGATCGGCGCCGGCTGCTATGCGGACGAC GCGACCTGCGCCGTCTCGACGACCGGTTCGGGCGAGATGTTCATGCGCATGGTGGCGGCCTACGACGTCGCCGCGCAAAT GGCCTACCGCAACGTGTCGCTGCAGGAAGCGGCCGACGACGTGGTGATGAACCGCCTTCCGAAGATCGACGGCCGCGGCG GCCTGATCGCCGTCGATGCGCGCGGCAACGTCGCGCTGCCGTTCAATACCGAAGGCATGTATCGCGGTTTTGCGCGGCTC GGTGAAACGCCGGTGACGGCGATTTACCGCTAG
Upstream 100 bases:
>100_bases ATCTGCAAGCGGGAGCCGCCGGCACGAGCGCGCGGCCCGCGCGCAACGCGACCCGAACCACCCGTACTGCCCGAACCACT CGCACTAGCCAATCCAAACG
Downstream 100 bases:
>100_bases TCGTTCTGCTCGCCGATAGCGTGAATCTTCGTTTCAAACTCGCCTGAATTTCAGTTAGCCGCGTTCGAATTCAAAGGAAC CACCGTGCCGACTCCATCGC
Product: peptidase T2, asparaginase 2
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; EcAIII; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNSNAVIAIHGGAGTILRASMSASAEADYHAALHAVLSAGQRVLAEGGSALDAVSEAVRLLEDCPLFNAGRGAVFTAAGT HELDAAIMDGRTLEAGAICCVKRVRNPVLAARRVLEGSEHVLFTGEGAEAFAAAQGLELVEPEYFHTEARHRQWLLARDQ QRAMLDHDGATLAAAPASNDDDPTPHEPIDPNRKFGTVGAVALDRHGHVAAATSTGGVTNKQVGRVGDAPLIGAGCYADD ATCAVSTTGSGEMFMRMVAAYDVAAQMAYRNVSLQEAADDVVMNRLPKIDGRGGLIAVDARGNVALPFNTEGMYRGFARL GETPVTAIYR
Sequences:
>Translated_330_residues MNSNAVIAIHGGAGTILRASMSASAEADYHAALHAVLSAGQRVLAEGGSALDAVSEAVRLLEDCPLFNAGRGAVFTAAGT HELDAAIMDGRTLEAGAICCVKRVRNPVLAARRVLEGSEHVLFTGEGAEAFAAAQGLELVEPEYFHTEARHRQWLLARDQ QRAMLDHDGATLAAAPASNDDDPTPHEPIDPNRKFGTVGAVALDRHGHVAAATSTGGVTNKQVGRVGDAPLIGAGCYADD ATCAVSTTGSGEMFMRMVAAYDVAAQMAYRNVSLQEAADDVVMNRLPKIDGRGGLIAVDARGNVALPFNTEGMYRGFARL GETPVTAIYR >Mature_330_residues MNSNAVIAIHGGAGTILRASMSASAEADYHAALHAVLSAGQRVLAEGGSALDAVSEAVRLLEDCPLFNAGRGAVFTAAGT HELDAAIMDGRTLEAGAICCVKRVRNPVLAARRVLEGSEHVLFTGEGAEAFAAAQGLELVEPEYFHTEARHRQWLLARDQ QRAMLDHDGATLAAAPASNDDDPTPHEPIDPNRKFGTVGAVALDRHGHVAAATSTGGVTNKQVGRVGDAPLIGAGCYADD ATCAVSTTGSGEMFMRMVAAYDVAAQMAYRNVSLQEAADDVVMNRLPKIDGRGGLIAVDARGNVALPFNTEGMYRGFARL GETPVTAIYR
Specific function: May be involved in glutathione, and possibly other peptide, transport, although these results could also be due to polar effects of disruption [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=320, Percent_Identity=37.8125, Blast_Score=179, Evalue=2e-45, Organism=Homo sapiens, GI145275200, Length=320, Percent_Identity=37.8125, Blast_Score=179, Evalue=2e-45, Organism=Homo sapiens, GI285002251, Length=237, Percent_Identity=36.7088607594937, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI98991769, Length=279, Percent_Identity=33.6917562724014, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI285002253, Length=237, Percent_Identity=34.5991561181435, Blast_Score=101, Evalue=8e-22, Organism=Escherichia coli, GI1787050, Length=327, Percent_Identity=59.0214067278288, Blast_Score=369, Evalue=1e-103, Organism=Drosophila melanogaster, GI18921183, Length=321, Percent_Identity=37.3831775700935, Blast_Score=178, Evalue=5e-45, Organism=Drosophila melanogaster, GI21357893, Length=271, Percent_Identity=33.210332103321, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI221330102, Length=241, Percent_Identity=33.6099585062241, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI24652135, Length=250, Percent_Identity=33.2, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24655553, Length=222, Percent_Identity=31.0810810810811, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24657358, Length=237, Percent_Identity=29.535864978903, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 34491; Mature: 34491
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNAVIAIHGGAGTILRASMSASAEADYHAALHAVLSAGQRVLAEGGSALDAVSEAVRL CCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHH LEDCPLFNAGRGAVFTAAGTHELDAAIMDGRTLEAGAICCVKRVRNPVLAARRVLEGSEH HHHCCCCCCCCCEEEEECCCCHHHHHHHCCCEECHHHHHHHHHHCCHHHHHHHHHCCCCE VLFTGEGAEAFAAAQGLELVEPEYFHTEARHRQWLLARDQQRAMLDHDGATLAAAPASND EEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCC DDPTPHEPIDPNRKFGTVGAVALDRHGHVAAATSTGGVTNKQVGRVGDAPLIGAGCYADD CCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHCCCCCCCEEECCCCCCC ATCAVSTTGSGEMFMRMVAAYDVAAQMAYRNVSLQEAADDVVMNRLPKIDGRGGLIAVDA CEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEC RGNVALPFNTEGMYRGFARLGETPVTAIYR CCCEEEEECCCHHHHHHHHHCCCCCCEECC >Mature Secondary Structure MNSNAVIAIHGGAGTILRASMSASAEADYHAALHAVLSAGQRVLAEGGSALDAVSEAVRL CCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHH LEDCPLFNAGRGAVFTAAGTHELDAAIMDGRTLEAGAICCVKRVRNPVLAARRVLEGSEH HHHCCCCCCCCCEEEEECCCCHHHHHHHCCCEECHHHHHHHHHHCCHHHHHHHHHCCCCE VLFTGEGAEAFAAAQGLELVEPEYFHTEARHRQWLLARDQQRAMLDHDGATLAAAPASND EEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCC DDPTPHEPIDPNRKFGTVGAVALDRHGHVAAATSTGGVTNKQVGRVGDAPLIGAGCYADD CCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHCCCCCCCEEECCCCCCC ATCAVSTTGSGEMFMRMVAAYDVAAQMAYRNVSLQEAADDVVMNRLPKIDGRGGLIAVDA CEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEC RGNVALPFNTEGMYRGFARLGETPVTAIYR CCCEEEEECCCHHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 3045084; 7984428 [H]