| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784933
Identifier: 91784933
GI number: 91784933
Start: 3943017
End: 3944243
Strand: Reverse
Name: 91784933
Synonym: Bxe_A0847
Alternate gene names: NA
Gene position: 3944243-3943017 (Counterclockwise)
Preceding gene: 91784934
Following gene: 91784932
Centisome position: 80.56
GC content: 63.33
Gene sequence:
>1227_bases ATGGCATCGCAACTTTCCTGGCTCGATCACGACGCGGCCGCCGCACAACGCAGCCTTCAGATACTCTCCCTGTTCAACGA GCCTGATGCGCGCGACGAGCTGGGCATCGGCGGTATTCGCGATTCGATCGCGGACCAGCTGTTTCCCGGCACATCGACCA TTCAGACTCGTCTGCGCTATGTATTCTTCGTGCCCTGGTTGCTCGAACAGCTGGAGTCACGCAACACGTCGTCTTCGGCG TTTGCTGGCGCGTCACGCGCGGCGGAGTTCAAGCTGCTCGAGCAACTGATTGCTCACGCGCCGCCGAACGAGCCCGGCAT CATTGGCCGGGACGCGCGCGGGGAATTAAAACGCTTGCCGAGCTCGGTCTACTGGGCGGCATTAGGCAGCTGGGGCATGC GGCGCTCGCGCGTTTCGCTGCAGCAGTATTTCGGCCTCGCCGACCGGCGATCCGCGCAACGCCGCGCGCAGCGCAAGCGC GACGACAATGAAAGCTACGATGGCGAGCAGACCGGCCGCGTGTGGGACGAGAAGCTGATTGCGCTGCGCCCCGAGGGCTT TCCGGCCGCGGCACAGTTGCAACTCACGCGCCATGAAGCTGAATTTCTTCTCGACCGCTGGACGCTCAATCACCGGAATT CGCTGCTGACCCGGCTCGCGCACGACCTCGCAAAAGGCGATCCACTAGCCGACGCTGAGCAGATCTGGTTGCATCCACGC AAGGAGCAGTTCCCACAGGAAATCCGCCTACTGATTGCCGATGCGCAGCGCCTGACGATTCTGATTCGGGGCGCGGCGCT TCTTTACAACCTCGAACTTGCGAAGCTCGCGCCGCGTTGCGACAACATTGTCGCCGATCGGGAGCCGGAACTCGCAGTTT GGGCTGAGCAGGATTTGCCGCTTTGCGCCGGCTGGGACCTCGATTCGTTCTGGACGCGCGTCGTAGGCAAGGGTCACACG ATAAGCGCGCCAACCCGGGATTTCGTGCGCAACTGGCTCGATCTTGCGTTGCGCGAACAAAAGGGTGTGGCCGAATCGCG CGACTGCTGTCAGCTCATCCGGATCCGCGAATCAAACCTCAAGACCGGGGGCAACCGCTCGCGCTTCGAGAACCAGGCTG CGCGTGCCCAATGGAGCGGCAAGGCCGGCCTCGTCCCGCTCAGCTATCGCTGGCCGGTGGCGCGCGATTTCCTGCGCGAA TGGTACGCCGGCTGGAGAGCCGCATGA
Upstream 100 bases:
>100_bases CGAGGGCGAATTGAGTCTGGTCCGAAAATAGCCGGGTGCCCGGGACAGCTGGCGGCCTGACGCCGGTTTCGAACCACGAG AAAACCAGCAACAACGATCT
Downstream 100 bases:
>100_bases TTAATCCCGATCAACGCAGTCTGCTTACCGACGCACTTACGCCACCAGACCGCTATCGTTACGAATGCGGCGTCGCGACG ACCTATTCGCTCGACCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MASQLSWLDHDAAAAQRSLQILSLFNEPDARDELGIGGIRDSIADQLFPGTSTIQTRLRYVFFVPWLLEQLESRNTSSSA FAGASRAAEFKLLEQLIAHAPPNEPGIIGRDARGELKRLPSSVYWAALGSWGMRRSRVSLQQYFGLADRRSAQRRAQRKR DDNESYDGEQTGRVWDEKLIALRPEGFPAAAQLQLTRHEAEFLLDRWTLNHRNSLLTRLAHDLAKGDPLADAEQIWLHPR KEQFPQEIRLLIADAQRLTILIRGAALLYNLELAKLAPRCDNIVADREPELAVWAEQDLPLCAGWDLDSFWTRVVGKGHT ISAPTRDFVRNWLDLALREQKGVAESRDCCQLIRIRESNLKTGGNRSRFENQAARAQWSGKAGLVPLSYRWPVARDFLRE WYAGWRAA
Sequences:
>Translated_408_residues MASQLSWLDHDAAAAQRSLQILSLFNEPDARDELGIGGIRDSIADQLFPGTSTIQTRLRYVFFVPWLLEQLESRNTSSSA FAGASRAAEFKLLEQLIAHAPPNEPGIIGRDARGELKRLPSSVYWAALGSWGMRRSRVSLQQYFGLADRRSAQRRAQRKR DDNESYDGEQTGRVWDEKLIALRPEGFPAAAQLQLTRHEAEFLLDRWTLNHRNSLLTRLAHDLAKGDPLADAEQIWLHPR KEQFPQEIRLLIADAQRLTILIRGAALLYNLELAKLAPRCDNIVADREPELAVWAEQDLPLCAGWDLDSFWTRVVGKGHT ISAPTRDFVRNWLDLALREQKGVAESRDCCQLIRIRESNLKTGGNRSRFENQAARAQWSGKAGLVPLSYRWPVARDFLRE WYAGWRAA >Mature_407_residues ASQLSWLDHDAAAAQRSLQILSLFNEPDARDELGIGGIRDSIADQLFPGTSTIQTRLRYVFFVPWLLEQLESRNTSSSAF AGASRAAEFKLLEQLIAHAPPNEPGIIGRDARGELKRLPSSVYWAALGSWGMRRSRVSLQQYFGLADRRSAQRRAQRKRD DNESYDGEQTGRVWDEKLIALRPEGFPAAAQLQLTRHEAEFLLDRWTLNHRNSLLTRLAHDLAKGDPLADAEQIWLHPRK EQFPQEIRLLIADAQRLTILIRGAALLYNLELAKLAPRCDNIVADREPELAVWAEQDLPLCAGWDLDSFWTRVVGKGHTI SAPTRDFVRNWLDLALREQKGVAESRDCCQLIRIRESNLKTGGNRSRFENQAARAQWSGKAGLVPLSYRWPVARDFLREW YAGWRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46383; Mature: 46252
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQLSWLDHDAAAAQRSLQILSLFNEPDARDELGIGGIRDSIADQLFPGTSTIQTRLRY CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHH VFFVPWLLEQLESRNTSSSAFAGASRAAEFKLLEQLIAHAPPNEPGIIGRDARGELKRLP HHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC SSVYWAALGSWGMRRSRVSLQQYFGLADRRSAQRRAQRKRDDNESYDGEQTGRVWDEKLI HHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHE ALRPEGFPAAAQLQLTRHEAEFLLDRWTLNHRNSLLTRLAHDLAKGDPLADAEQIWLHPR EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC KEQFPQEIRLLIADAQRLTILIRGAALLYNLELAKLAPRCDNIVADREPELAVWAEQDLP HHHHHHHHHHHHHHHHHEEEEEECHHHHHCCHHHHHCCHHHHHCCCCCCCEEEEECCCCC LCAGWDLDSFWTRVVGKGHTISAPTRDFVRNWLDLALREQKGVAESRDCCQLIRIRESNL EEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC KTGGNRSRFENQAARAQWSGKAGLVPLSYRWPVARDFLREWYAGWRAA CCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASQLSWLDHDAAAAQRSLQILSLFNEPDARDELGIGGIRDSIADQLFPGTSTIQTRLRY CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHH VFFVPWLLEQLESRNTSSSAFAGASRAAEFKLLEQLIAHAPPNEPGIIGRDARGELKRLP HHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC SSVYWAALGSWGMRRSRVSLQQYFGLADRRSAQRRAQRKRDDNESYDGEQTGRVWDEKLI HHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHE ALRPEGFPAAAQLQLTRHEAEFLLDRWTLNHRNSLLTRLAHDLAKGDPLADAEQIWLHPR EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC KEQFPQEIRLLIADAQRLTILIRGAALLYNLELAKLAPRCDNIVADREPELAVWAEQDLP HHHHHHHHHHHHHHHHHEEEEEECHHHHHCCHHHHHCCHHHHHCCCCCCCEEEEECCCCC LCAGWDLDSFWTRVVGKGHTISAPTRDFVRNWLDLALREQKGVAESRDCCQLIRIRESNL EEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC KTGGNRSRFENQAARAQWSGKAGLVPLSYRWPVARDFLREWYAGWRAA CCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA