| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784923
Identifier: 91784923
GI number: 91784923
Start: 3929918
End: 3930511
Strand: Reverse
Name: 91784923
Synonym: Bxe_A0857
Alternate gene names: NA
Gene position: 3930511-3929918 (Counterclockwise)
Preceding gene: 91784924
Following gene: 91784922
Centisome position: 80.28
GC content: 62.29
Gene sequence:
>594_bases ATGACTCGACCCGCTGCGCCGGCCCGGCGCCGCTTTCTGCTCGCCGCGCTGACCGGTTCTGGCGCGCTCGGCATCACCGT TTCGCTCGCGGCCTGCGCAACACCGACGTTTCCGTTCATCCCTTCGCACTACACGTTCTCGCAGCAGCAGGTGCAGGACG CGGTGCAGCGCAAGTTCCCGTATCAGCGCACGGTCTCGCAGGTGTTCGATATCGCGCTGACCAACCCCGTGGTCGGCTTC CTGCCGGATACGAACCGCGTCTCGGTGAAGCTCGACGCCCGCTTCGCGAGTCCCTTCATGCCGCAGCCGGTGGACGGCGT GTTCATGCTGTCGAGCGAACTGGCCTACGACGCCGCCAGCAAATCCGTCGTGCTCAGATCACCGAATGTCGACAATGTCA GCGTGAGCGGGCAGGCGCAGGCCTACACGCAGCAGATCAACGCCGCGGCGGGGCTGCTCGCCACGCAGTTGCTGACCAAC TATCCGATCTACACCTTCAAGCCCGAACAACTGCAATTTGCCGGTGTGAATTACGAACCCGGTACAATCACCATCCTTAC AAACGGCATACGCGTGCAAATCGTCGAAAAATGA
Upstream 100 bases:
>100_bases ACGCGCATGAGCGCACGAGCGCACGTATGGCCAAAACGCCGCAAGCCGCAAACGAACGACGCAACTGCAGGCCCGAACAG GTTTCCACAGGAGATTTCGC
Downstream 100 bases:
>100_bases CGTGCCGCGCGGCCGGCAGGGCCGCGCGATTCCACGCCGGCCCTGTTCGTTCCGACTATCTATAGCGATGAGGGGCACGG ATGGACTGGCTATTGGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Lipoprotein
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTRPAAPARRRFLLAALTGSGALGITVSLAACATPTFPFIPSHYTFSQQQVQDAVQRKFPYQRTVSQVFDIALTNPVVGF LPDTNRVSVKLDARFASPFMPQPVDGVFMLSSELAYDAASKSVVLRSPNVDNVSVSGQAQAYTQQINAAAGLLATQLLTN YPIYTFKPEQLQFAGVNYEPGTITILTNGIRVQIVEK
Sequences:
>Translated_197_residues MTRPAAPARRRFLLAALTGSGALGITVSLAACATPTFPFIPSHYTFSQQQVQDAVQRKFPYQRTVSQVFDIALTNPVVGF LPDTNRVSVKLDARFASPFMPQPVDGVFMLSSELAYDAASKSVVLRSPNVDNVSVSGQAQAYTQQINAAAGLLATQLLTN YPIYTFKPEQLQFAGVNYEPGTITILTNGIRVQIVEK >Mature_196_residues TRPAAPARRRFLLAALTGSGALGITVSLAACATPTFPFIPSHYTFSQQQVQDAVQRKFPYQRTVSQVFDIALTNPVVGFL PDTNRVSVKLDARFASPFMPQPVDGVFMLSSELAYDAASKSVVLRSPNVDNVSVSGQAQAYTQQINAAAGLLATQLLTNY PIYTFKPEQLQFAGVNYEPGTITILTNGIRVQIVEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21373; Mature: 21241
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPAAPARRRFLLAALTGSGALGITVSLAACATPTFPFIPSHYTFSQQQVQDAVQRKFP CCCCCCCHHHEEEEEEECCCCCEEEEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC YQRTVSQVFDIALTNPVVGFLPDTNRVSVKLDARFASPFMPQPVDGVFMLSSELAYDAAS HHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECEECCCCCCCCCCCEEEEECHHHHCCCC KSVVLRSPNVDNVSVSGQAQAYTQQINAAAGLLATQLLTNYPIYTFKPEQLQFAGVNYEP CEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCC GTITILTNGIRVQIVEK CEEEEEECCEEEEEEEC >Mature Secondary Structure TRPAAPARRRFLLAALTGSGALGITVSLAACATPTFPFIPSHYTFSQQQVQDAVQRKFP CCCCCCHHHEEEEEEECCCCCEEEEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC YQRTVSQVFDIALTNPVVGFLPDTNRVSVKLDARFASPFMPQPVDGVFMLSSELAYDAAS HHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECEECCCCCCCCCCCEEEEECHHHHCCCC KSVVLRSPNVDNVSVSGQAQAYTQQINAAAGLLATQLLTNYPIYTFKPEQLQFAGVNYEP CEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCC GTITILTNGIRVQIVEK CEEEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA