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The map label for this gene is tdcF [C]

Identifier: 91784891

GI number: 91784891

Start: 3893002

End: 3893406

Strand: Reverse

Name: tdcF [C]

Synonym: Bxe_A0900

Alternate gene names: 91784891

Gene position: 3893406-3893002 (Counterclockwise)

Preceding gene: 91784892

Following gene: 91784887

Centisome position: 79.52

GC content: 62.22

Gene sequence:

>405_bases
ATGGCTGACAGTCAGCACGGCTCGCATCTGCCGCGTACAGAAAATCCTGCCACGCTTTCGAAGCCGGGTGGCCACTATAG
TCACGTCGCGATTGCGAATGGCTTTGTGTTCGTCTCGGGACAACTGCCGATTACCCCGCAAGGCGGCAAGCTGTCCGAGG
CGTCGTTCGAGGTTCAGGCCGAACAGGTGCTGGCCAATGTGCAGGCGGCGCTCGAAAGTGCGGGCAGTAGCGTCGCGCAA
CTGGTGCAGGTGCGCGTCTACATTGTCGATGTCGAGCATTGGATGAGCTTCAACCAGATCTATGCGCGGTGGGCGGGCGA
AGCTCGGCCGGCGCGCGCCGTCGTGCCGGTTCCTCAACTGCACTACGGCTTCAGGATCGAGGTCGAGGCGACGGCGCTGG
TTTAG

Upstream 100 bases:

>100_bases
ATGGTTCGCGTGGTCGCTTCATCGCTTATGCGCAACGGGATGCAGCCGCGCGAACGACTCGCGTGCAGCGTCATGCGTTG
TCACATCTGGAGTGGTATTC

Downstream 100 bases:

>100_bases
GTGGTGAGCCTGGCATCCTGATCGCGTGGTGGCTTTTTGCGCATCTCCATTTCAAAAGCCTGATGCGCGAAAGCCCGCTT
GTGGCGGGCTCAAGGGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MADSQHGSHLPRTENPATLSKPGGHYSHVAIANGFVFVSGQLPITPQGGKLSEASFEVQAEQVLANVQAALESAGSSVAQ
LVQVRVYIVDVEHWMSFNQIYARWAGEARPARAVVPVPQLHYGFRIEVEATALV

Sequences:

>Translated_134_residues
MADSQHGSHLPRTENPATLSKPGGHYSHVAIANGFVFVSGQLPITPQGGKLSEASFEVQAEQVLANVQAALESAGSSVAQ
LVQVRVYIVDVEHWMSFNQIYARWAGEARPARAVVPVPQLHYGFRIEVEATALV
>Mature_133_residues
ADSQHGSHLPRTENPATLSKPGGHYSHVAIANGFVFVSGQLPITPQGGKLSEASFEVQAEQVLANVQAALESAGSSVAQL
VQVRVYIVDVEHWMSFNQIYARWAGEARPARAVVPVPQLHYGFRIEVEATALV

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=119, Percent_Identity=31.9327731092437, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87082213, Length=117, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI87082396, Length=125, Percent_Identity=34.4, Blast_Score=65, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320899, Length=100, Percent_Identity=40, Blast_Score=91, Evalue=5e-20,
Organism=Saccharomyces cerevisiae, GI6322138, Length=111, Percent_Identity=36.9369369369369, Blast_Score=78, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14446; Mature: 14315

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSQHGSHLPRTENPATLSKPGGHYSHVAIANGFVFVSGQLPITPQGGKLSEASFEVQA
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCEECCCCCCCCCCHHHHHH
EQVLANVQAALESAGSSVAQLVQVRVYIVDVEHWMSFNQIYARWAGEARPARAVVPVPQL
HHHHHHHHHHHHHCCHHHHHHHEEEEEEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
HYGFRIEVEATALV
CCCEEEEEEEEEEC
>Mature Secondary Structure 
ADSQHGSHLPRTENPATLSKPGGHYSHVAIANGFVFVSGQLPITPQGGKLSEASFEVQA
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCEECCCCCCCCCCHHHHHH
EQVLANVQAALESAGSSVAQLVQVRVYIVDVEHWMSFNQIYARWAGEARPARAVVPVPQL
HHHHHHHHHHHHHCCHHHHHHHEEEEEEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
HYGFRIEVEATALV
CCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]