| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is gmk
Identifier: 91784886
GI number: 91784886
Start: 3888233
End: 3888910
Strand: Reverse
Name: gmk
Synonym: Bxe_A0905
Alternate gene names: 91784886
Gene position: 3888910-3888233 (Counterclockwise)
Preceding gene: 91784887
Following gene: 91784885
Centisome position: 79.43
GC content: 63.13
Gene sequence:
>678_bases ATGACCGACCACCACACACGCGAAACGCCGCGCAATCCGTACGCCGGTGCTTACCCCGGCAACCTGTTCATGGTCGTCGC GCCTTCGGGCGCGGGCAAGTCGACGCTCGTGAACGCGCTGCTCGCCGGCGACGACGCGATCCGTCTGTCGATTTCGTACA CGACGCGCCCGCCGCGTCCGAAGGAGCTGGACGGCGAGCACTACCACTTCACCACCGTCGACGATTTCATGAAGCGTCAC GATGCCGGCGAGTTTCTGGAAAGCGCGGAAGTGCACGGCAACTACTACGGCACCTCGCGCGTGTGGATCGAGGACCAGAT GAAAAGCGGCCATGACGTGCTGCTCGAAATCGACTGGCAGGGTGCGCAGCAGGTGAAAAAGCAGTTTCACAACGCGGTCG AAATCTTCATTTTGCCGCCGTCGCTCGAAGCGCTCGAAGAGCGTCTGAAGAAGCGCGGCCAGGACGAGCCGAACGTGATC ACACGCCGGCTGCTCGCGGCCGGCAGCGAGATGGCGCACGCGGCGGAAGCGGAGTACGTGGTGATCAACGAGAACTTCGA TCGCGCGCTCAGCGAACTGCAATGCCTGGTGGCGGCGACGCGTTCGCGCTTCGCCTCGCAATACGCGCGCCACACGCAGC TTTTCGTGCAACTCGGCATTCATCTGCCACACGCGTAA
Upstream 100 bases:
>100_bases CGCGAAGGAACTGGCGGATTCGTCGATGACCCTGAAGCTGCTCATCGAACAGATGCGCGAACAGGTACAGAATCTGGAAT AAGGCTGGAGCACCACAAAA
Downstream 100 bases:
>100_bases GCGCGGCGGTGTATCGAGCACATAAGGTAGAATAAGCAACATACTGAGAAGGAACCCAACATGGCCCGCATTACCGTCGA AGACTGCCTCAAACAGATCC
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTDHHTRETPRNPYAGAYPGNLFMVVAPSGAGKSTLVNALLAGDDAIRLSISYTTRPPRPKELDGEHYHFTTVDDFMKRH DAGEFLESAEVHGNYYGTSRVWIEDQMKSGHDVLLEIDWQGAQQVKKQFHNAVEIFILPPSLEALEERLKKRGQDEPNVI TRRLLAAGSEMAHAAEAEYVVINENFDRALSELQCLVAATRSRFASQYARHTQLFVQLGIHLPHA
Sequences:
>Translated_225_residues MTDHHTRETPRNPYAGAYPGNLFMVVAPSGAGKSTLVNALLAGDDAIRLSISYTTRPPRPKELDGEHYHFTTVDDFMKRH DAGEFLESAEVHGNYYGTSRVWIEDQMKSGHDVLLEIDWQGAQQVKKQFHNAVEIFILPPSLEALEERLKKRGQDEPNVI TRRLLAAGSEMAHAAEAEYVVINENFDRALSELQCLVAATRSRFASQYARHTQLFVQLGIHLPHA >Mature_224_residues TDHHTRETPRNPYAGAYPGNLFMVVAPSGAGKSTLVNALLAGDDAIRLSISYTTRPPRPKELDGEHYHFTTVDDFMKRHD AGEFLESAEVHGNYYGTSRVWIEDQMKSGHDVLLEIDWQGAQQVKKQFHNAVEIFILPPSLEALEERLKKRGQDEPNVIT RRLLAAGSEMAHAAEAEYVVINENFDRALSELQCLVAATRSRFASQYARHTQLFVQLGIHLPHA
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874831, Length=175, Percent_Identity=37.7142857142857, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI226874833, Length=175, Percent_Identity=37.7142857142857, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI4504221, Length=175, Percent_Identity=37.7142857142857, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI4505237, Length=179, Percent_Identity=28.4916201117318, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI262118259, Length=179, Percent_Identity=28.4916201117318, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI262118255, Length=179, Percent_Identity=28.4916201117318, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI262118263, Length=179, Percent_Identity=28.4916201117318, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI38570142, Length=178, Percent_Identity=28.0898876404494, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI21361598, Length=190, Percent_Identity=24.2105263157895, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI52630447, Length=191, Percent_Identity=24.6073298429319, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1790080, Length=201, Percent_Identity=48.7562189054726, Blast_Score=196, Evalue=1e-51, Organism=Caenorhabditis elegans, GI193203132, Length=189, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17508835, Length=180, Percent_Identity=33.8888888888889, Blast_Score=104, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71990720, Length=77, Percent_Identity=45.4545454545455, Blast_Score=71, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71988041, Length=183, Percent_Identity=25.1366120218579, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71988048, Length=183, Percent_Identity=25.1366120218579, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=182, Percent_Identity=39.5604395604396, Blast_Score=132, Evalue=4e-32, Organism=Drosophila melanogaster, GI21356141, Length=180, Percent_Identity=35, Blast_Score=108, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_BURXL (Q13V49)
Other databases:
- EMBL: CP000270 - RefSeq: YP_560092.1 - ProteinModelPortal: Q13V49 - SMR: Q13V49 - GeneID: 4002827 - GenomeReviews: CP000270_GR - KEGG: bxe:Bxe_A0905 - HOGENOM: HBG671982 - OMA: EWAEFAG - ProtClustDB: PRK00300 - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 25307; Mature: 25176
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHHTRETPRNPYAGAYPGNLFMVVAPSGAGKSTLVNALLAGDDAIRLSISYTTRPPRP CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCC KELDGEHYHFTTVDDFMKRHDAGEFLESAEVHGNYYGTSRVWIEDQMKSGHDVLLEIDWQ CCCCCCEEEEECHHHHHHHCCHHHHHHHHHHCCCEECCEEEEEECCCCCCCEEEEEECCC GAQQVKKQFHNAVEIFILPPSLEALEERLKKRGQDEPNVITRRLLAAGSEMAHAAEAEYV CHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCCCEE VINENFDRALSELQCLVAATRSRFASQYARHTQLFVQLGIHLPHA EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TDHHTRETPRNPYAGAYPGNLFMVVAPSGAGKSTLVNALLAGDDAIRLSISYTTRPPRP CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCC KELDGEHYHFTTVDDFMKRHDAGEFLESAEVHGNYYGTSRVWIEDQMKSGHDVLLEIDWQ CCCCCCEEEEECHHHHHHHCCHHHHHHHHHHCCCEECCEEEEEECCCCCCCEEEEEECCC GAQQVKKQFHNAVEIFILPPSLEALEERLKKRGQDEPNVITRRLLAAGSEMAHAAEAEYV CHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCCCEE VINENFDRALSELQCLVAATRSRFASQYARHTQLFVQLGIHLPHA EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA