| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91784727
Identifier: 91784727
GI number: 91784727
Start: 3713401
End: 3713802
Strand: Reverse
Name: 91784727
Synonym: Bxe_A1065
Alternate gene names: NA
Gene position: 3713802-3713401 (Counterclockwise)
Preceding gene: 91784728
Following gene: 91784726
Centisome position: 75.86
GC content: 65.67
Gene sequence:
>402_bases ATGAGCGAGCAGTCGACAGAAGCGGCGAAGGCGGTTCGCATTTGCGCGTCGGCGGAACTGGTCGACGGCGGCACGGGCGT GCGTCGTGAGGCGAAACTCGGCGGCGGCGACGTCGTCGTGTTTTTTGTTCGCTATGATGGCCGTGCATACGGCTACCTGA ACCGCTGCGCCCACGTCCCAATGGAACTGGACTGGGCCGAGGGCCAGTTCTTCGAATCGTCCGGTTTATACTTGATGTGC GCCACACATGGCGCGATTTACGCGCCGGATACGGGCAAATGCGTCGGCGGTCCGTGCCGCGGCGGCAGATTGCGGCCCGT CCAGGTGGACGAGCGCGATACGCCGGAAGGCCGCGCCGTTTTCTGGCTGCCTGACGGCGAACTGCGCCCCGCCACCCCCT GA
Upstream 100 bases:
>100_bases TCACATATGGGGCGCATCCTGAGGGGTCGTTGAGCGCGTTAGCGCCGAAGTTCGTTGCATCGAGCGTCGGTGTGCTGTCG GGCTGGCTGCGAGAGAACGC
Downstream 100 bases:
>100_bases TTTTTCCTCTTCTTCGACCTTTCCACTGCACCGCATGTCCGACAATTTGACTCCCGAGCCGAAGGAACCGTCCCTGACAG GCCGCCCCCGCACGCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Rieske Domain Protein; Rieske Region; Ferredoxin; Rieske Protein; Rieske; Rieske Iron-Sulfur Domain Protein; Rieske 2Fe-2S Family Protein; Nitrite Reductase Ferredoxin Subunit; Rieske Iron-Sulphur Domain Protein; Ferredoxin Protein; Rieske Iron-Sulfur Domain-Containing Protein
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSEQSTEAAKAVRICASAELVDGGTGVRREAKLGGGDVVVFFVRYDGRAYGYLNRCAHVPMELDWAEGQFFESSGLYLMC ATHGAIYAPDTGKCVGGPCRGGRLRPVQVDERDTPEGRAVFWLPDGELRPATP
Sequences:
>Translated_133_residues MSEQSTEAAKAVRICASAELVDGGTGVRREAKLGGGDVVVFFVRYDGRAYGYLNRCAHVPMELDWAEGQFFESSGLYLMC ATHGAIYAPDTGKCVGGPCRGGRLRPVQVDERDTPEGRAVFWLPDGELRPATP >Mature_132_residues SEQSTEAAKAVRICASAELVDGGTGVRREAKLGGGDVVVFFVRYDGRAYGYLNRCAHVPMELDWAEGQFFESSGLYLMCA THGAIYAPDTGKCVGGPCRGGRLRPVQVDERDTPEGRAVFWLPDGELRPATP
Specific function: Unknown
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14370; Mature: 14239
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQSTEAAKAVRICASAELVDGGTGVRREAKLGGGDVVVFFVRYDGRAYGYLNRCAHVP CCCCHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCEEEEEEEECCEEEEECHHHCCCC MELDWAEGQFFESSGLYLMCATHGAIYAPDTGKCVGGPCRGGRLRPVQVDERDTPEGRAV EEEECCCCEEEECCCCEEEEECCCEEECCCCCCEECCCCCCCEECEEECCCCCCCCCCEE FWLPDGELRPATP EEECCCCCCCCCC >Mature Secondary Structure SEQSTEAAKAVRICASAELVDGGTGVRREAKLGGGDVVVFFVRYDGRAYGYLNRCAHVP CCCHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCEEEEEEEECCEEEEECHHHCCCC MELDWAEGQFFESSGLYLMCATHGAIYAPDTGKCVGGPCRGGRLRPVQVDERDTPEGRAV EEEECCCCEEEECCCCEEEEECCCEEECCCCCCEECCCCCCCEECEEECCCCCCCCCCEE FWLPDGELRPATP EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA