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The map label for this gene is degP [H]

Identifier: 91784711

GI number: 91784711

Start: 3699091

End: 3700614

Strand: Reverse

Name: degP [H]

Synonym: Bxe_A1081

Alternate gene names: 91784711

Gene position: 3700614-3699091 (Counterclockwise)

Preceding gene: 91784712

Following gene: 91784710

Centisome position: 75.59

GC content: 65.35

Gene sequence:

>1524_bases
ATGACGACTTTCTCGGTGCGCAAATTCCTCGCGGCCGCGGTGGTAGCGGCGTGTTTGCCGCTCGTGCCGCATATGGCGTC
GGCCGCTCCCGCCGCCGCCAATCTGCCCGACTTCACTGACCTGGTTGACAAGGTCGGGCCGGCGGTCGTCAACATTCGCA
CGACCACGCGCGTGTCGAACAGCGGTGCCCGTAGCGGTTTGCCGCCGGGCATGGACGACGGCGATATGTCGGAGTTTTTC
CGCCGCTTCTTCGGCATTCCGTTGCCGCAGTCGCCCCAATCCCCGGGTTCACCGGGCTCGCCCCGCGGCGGCGGCGACAA
CGGCGGTAGCGGCGGCAGCCAGGATTCGCCGGACAACAGCGATCAGGAACAGAACAGCGGCGTCGGCTCGGGCTTTATCC
TGTCGGCGGACGGCTACGTAATGACCAACGCGCACGTCATCGACGACGCGGACACCATTTACGTCACGCTCACCGACAAG
CGCGAATTCAAGGCGAAGCTGATCGGCGTGGACGATCGCACCGACGTGGCCGTCGTGAAGATCAGTGCCGCCAATCTGCC
GACCATTACGATCGGCGACTCGAACAAGGTTCGCGTGGGCGAGTGGGTGGTCGCGATCGGCTCGCCGTTCGGGCTGGAGA
ACACGGTGACGGCCGGCATCGTCAGCGCCAAGGGGCGCGACACGGGCGACTATCTGCCGTTCATCCAGACCGACGTGGCC
GTCAATCCGGGCAACTCGGGCGGTCCGCTGATCAATATGCAGGGCGAAGTGATCGGCATCAACTCGCAGATCTATAGCCG
CACCGGCGGTTTCATGGGCATTTCGTTCGCGATTCCGATCGACGAGGCAATGCGCGTGGCCGACCAGTTGAAAGCGTCGG
GCAAGGTCGTGCGCGGCCGGATCGCCGTGGCGATCGGCGAAGTGACCAAAGACGTGGCCGACTCGCTCGGCTTGCCGAAG
GCGCAAGGCGCGCTGGTCAGCAGCGTCGAACCGGGCGGCCCGGCGGACAAAGCCGGCGTGCAGCCGGGCGACATCATCCT
GAAGTTCAACGGCCATCCGGTCGACACCGCGACGGACCTGCCGCGCATGGTCGGCGACACGAAGCCGGGCACCAGATCGA
CGATCACGATCTGGCGCAAGGGCCAGACACGCGATCTGCCGGTGACGATCGCCGAAATGCAGCCGGACAAGACGGTCAAG
GCGGATCAGAAGAAGCCGCCGGTGCCGAAGCAGCGCGCCACGAACGTGCTGGGTGTGGCTGTCAGCGATATCCCTGCCGA
TCAACTGAAGGCGCTCAAGCTGCGCAACGGCGTGCAGATCGACGCCGTGGACGGTCCGGCCGCGCGTGTCGGCCTGCAAA
AGGGCGACATCATTCTGCGGGTGGGCGACACGGACATCACGAGCGCGAAGCAGTTCGACGACGTGAGTTCGCACCTCGAT
TCGCAGAAGATGGTGGCACTGCTGGTTCGCCGCGGCGATAACACGCAGTTCGTGCCGATCCGCCCGCGCAGCGTCCAGAA
ATGA

Upstream 100 bases:

>100_bases
GTGAAGTGCCTCAGACCACATTGCAGCAATTTGCGTCTGCCATAGAATACAAAGCTCCGAAGTAATCCCCCGAATCCTGA
ATCCCTCGGCTTGCTACGAT

Downstream 100 bases:

>100_bases
CGAAGGCGGCACCGCTCACGCTCTACGGGCGCGCGTGGTGCCATCTTTGCGACGACATGCGCACCGCGCTCGCACCCTTG
CTGGCCGAATTCGGCGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MTTFSVRKFLAAAVVAACLPLVPHMASAAPAAANLPDFTDLVDKVGPAVVNIRTTTRVSNSGARSGLPPGMDDGDMSEFF
RRFFGIPLPQSPQSPGSPGSPRGGGDNGGSGGSQDSPDNSDQEQNSGVGSGFILSADGYVMTNAHVIDDADTIYVTLTDK
REFKAKLIGVDDRTDVAVVKISAANLPTITIGDSNKVRVGEWVVAIGSPFGLENTVTAGIVSAKGRDTGDYLPFIQTDVA
VNPGNSGGPLINMQGEVIGINSQIYSRTGGFMGISFAIPIDEAMRVADQLKASGKVVRGRIAVAIGEVTKDVADSLGLPK
AQGALVSSVEPGGPADKAGVQPGDIILKFNGHPVDTATDLPRMVGDTKPGTRSTITIWRKGQTRDLPVTIAEMQPDKTVK
ADQKKPPVPKQRATNVLGVAVSDIPADQLKALKLRNGVQIDAVDGPAARVGLQKGDIILRVGDTDITSAKQFDDVSSHLD
SQKMVALLVRRGDNTQFVPIRPRSVQK

Sequences:

>Translated_507_residues
MTTFSVRKFLAAAVVAACLPLVPHMASAAPAAANLPDFTDLVDKVGPAVVNIRTTTRVSNSGARSGLPPGMDDGDMSEFF
RRFFGIPLPQSPQSPGSPGSPRGGGDNGGSGGSQDSPDNSDQEQNSGVGSGFILSADGYVMTNAHVIDDADTIYVTLTDK
REFKAKLIGVDDRTDVAVVKISAANLPTITIGDSNKVRVGEWVVAIGSPFGLENTVTAGIVSAKGRDTGDYLPFIQTDVA
VNPGNSGGPLINMQGEVIGINSQIYSRTGGFMGISFAIPIDEAMRVADQLKASGKVVRGRIAVAIGEVTKDVADSLGLPK
AQGALVSSVEPGGPADKAGVQPGDIILKFNGHPVDTATDLPRMVGDTKPGTRSTITIWRKGQTRDLPVTIAEMQPDKTVK
ADQKKPPVPKQRATNVLGVAVSDIPADQLKALKLRNGVQIDAVDGPAARVGLQKGDIILRVGDTDITSAKQFDDVSSHLD
SQKMVALLVRRGDNTQFVPIRPRSVQK
>Mature_506_residues
TTFSVRKFLAAAVVAACLPLVPHMASAAPAAANLPDFTDLVDKVGPAVVNIRTTTRVSNSGARSGLPPGMDDGDMSEFFR
RFFGIPLPQSPQSPGSPGSPRGGGDNGGSGGSQDSPDNSDQEQNSGVGSGFILSADGYVMTNAHVIDDADTIYVTLTDKR
EFKAKLIGVDDRTDVAVVKISAANLPTITIGDSNKVRVGEWVVAIGSPFGLENTVTAGIVSAKGRDTGDYLPFIQTDVAV
NPGNSGGPLINMQGEVIGINSQIYSRTGGFMGISFAIPIDEAMRVADQLKASGKVVRGRIAVAIGEVTKDVADSLGLPKA
QGALVSSVEPGGPADKAGVQPGDIILKFNGHPVDTATDLPRMVGDTKPGTRSTITIWRKGQTRDLPVTIAEMQPDKTVKA
DQKKPPVPKQRATNVLGVAVSDIPADQLKALKLRNGVQIDAVDGPAARVGLQKGDIILRVGDTDITSAKQFDDVSSHLDS
QKMVALLVRRGDNTQFVPIRPRSVQK

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PDZ (DHR) domains [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=289, Percent_Identity=35.9861591695502, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI22129776, Length=262, Percent_Identity=38.1679389312977, Blast_Score=155, Evalue=9e-38,
Organism=Homo sapiens, GI24308541, Length=250, Percent_Identity=37.2, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI7019477, Length=280, Percent_Identity=38.5714285714286, Blast_Score=147, Evalue=3e-35,
Organism=Escherichia coli, GI1789629, Length=477, Percent_Identity=36.2683438155136, Blast_Score=248, Evalue=1e-66,
Organism=Escherichia coli, GI1786356, Length=483, Percent_Identity=34.3685300207039, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI1789630, Length=283, Percent_Identity=39.5759717314488, Blast_Score=185, Evalue=6e-48,
Organism=Drosophila melanogaster, GI24646839, Length=262, Percent_Identity=37.0229007633588, Blast_Score=158, Evalue=9e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR011782
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 53030; Mature: 52899

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFSVRKFLAAAVVAACLPLVPHMASAAPAAANLPDFTDLVDKVGPAVVNIRTTTRVSN
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEEEEEEECC
SGARSGLPPGMDDGDMSEFFRRFFGIPLPQSPQSPGSPGSPRGGGDNGGSGGSQDSPDNS
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DQEQNSGVGSGFILSADGYVMTNAHVIDDADTIYVTLTDKREFKAKLIGVDDRTDVAVVK
CCHHHCCCCCCEEEECCCEEEECCEEECCCCEEEEEEECCCCEEEEEECCCCCCCEEEEE
ISAANLPTITIGDSNKVRVGEWVVAIGSPFGLENTVTAGIVSAKGRDTGDYLPFIQTDVA
EECCCCCEEEECCCCCEEECEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEECEE
VNPGNSGGPLINMQGEVIGINSQIYSRTGGFMGISFAIPIDEAMRVADQLKASGKVVRGR
ECCCCCCCCEEEECCCEEEECHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEE
IAVAIGEVTKDVADSLGLPKAQGALVSSVEPGGPADKAGVQPGDIILKFNGHPVDTATDL
EEEEEHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHH
PRMVGDTKPGTRSTITIWRKGQTRDLPVTIAEMQPDKTVKADQKKPPVPKQRATNVLGVA
HHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHCCEEEEE
VSDIPADQLKALKLRNGVQIDAVDGPAARVGLQKGDIILRVGDTDITSAKQFDDVSSHLD
ECCCCHHHHHHHHHCCCCEEEECCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCC
SQKMVALLVRRGDNTQFVPIRPRSVQK
HHHHHHHHEECCCCCEEEEECCCCCCC
>Mature Secondary Structure 
TTFSVRKFLAAAVVAACLPLVPHMASAAPAAANLPDFTDLVDKVGPAVVNIRTTTRVSN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEEEEEEECC
SGARSGLPPGMDDGDMSEFFRRFFGIPLPQSPQSPGSPGSPRGGGDNGGSGGSQDSPDNS
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DQEQNSGVGSGFILSADGYVMTNAHVIDDADTIYVTLTDKREFKAKLIGVDDRTDVAVVK
CCHHHCCCCCCEEEECCCEEEECCEEECCCCEEEEEEECCCCEEEEEECCCCCCCEEEEE
ISAANLPTITIGDSNKVRVGEWVVAIGSPFGLENTVTAGIVSAKGRDTGDYLPFIQTDVA
EECCCCCEEEECCCCCEEECEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEECEE
VNPGNSGGPLINMQGEVIGINSQIYSRTGGFMGISFAIPIDEAMRVADQLKASGKVVRGR
ECCCCCCCCEEEECCCEEEECHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEE
IAVAIGEVTKDVADSLGLPKAQGALVSSVEPGGPADKAGVQPGDIILKFNGHPVDTATDL
EEEEEHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHH
PRMVGDTKPGTRSTITIWRKGQTRDLPVTIAEMQPDKTVKADQKKPPVPKQRATNVLGVA
HHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHCCEEEEE
VSDIPADQLKALKLRNGVQIDAVDGPAARVGLQKGDIILRVGDTDITSAKQFDDVSSHLD
ECCCCHHHHHHHHHCCCCEEEECCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCC
SQKMVALLVRRGDNTQFVPIRPRSVQK
HHHHHHHHEECCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7861951 [H]