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The map label for this gene is intZ [H]

Identifier: 91784695

GI number: 91784695

Start: 3680095

End: 3682026

Strand: Reverse

Name: intZ [H]

Synonym: Bxe_A1097

Alternate gene names: 91784695

Gene position: 3682026-3680095 (Counterclockwise)

Preceding gene: 91784696

Following gene: 91784688

Centisome position: 75.21

GC content: 64.29

Gene sequence:

>1932_bases
ATGGCACTCTCTGATCTGATCGTCCGGCAGGCCAAGACCACCGGCAAACGCTACACCCTCTACGACAACGACTGCCTGAG
CCTGATGGTCTCTGCCGCAGGCGGCAAGTCTTGGATGTTCCGCTACTCCTGGCTGGGCAAGCAAAAGCGCATGGCCCTGG
GCGGCTATCCTGCCCTCAGCCTGCGCGAGGCCCGCGCCGAGCGGGACAAGGCCCAGGCCCTGATCGCCAGGGGGATCGAT
CCCCAAATCGAACGCGATCAGCGTCGGCACGCGGCCAAGCTGGCCGGCGAATACACCTTCAAGAACGTCTTCGATGCCTG
GGTCGAGCATCGCCGCAAGGAACTCAAGGAAGGCCGCCAGAGTACGCTTTCGCAGATCCTGCGCATCTTCAACAAGGACG
TGCTGCCCACCCTAGGGAAGATGTCCATCTATGACATTCGCCGGCCCCAGCTCCTGGGCGTCCTGGCGGCGATCGAGAAG
CGCAAGGCGTTCACCACGGCCGAGAAGGTCCGCACCTGGTTCAACCAGATGTTCCGCTATGCCTTGGTCATCGCCGAGGG
GCTGGAAGTCAACCCGGCTGCGGACCTGGACGTGGTGGCCGAGCCCAAGCCCCCGGTGGCCCACAACCCCTATCTGCACC
TGCCCGAACTGCCCGAGTTCCTTCAGAAGCTGCGACGCTACAACCCCCGGGGCTGGCAGACCCAGCTTGGCGTGCGGCTA
CTGTTCCTGACGGGGGTGCGCACGGGCGAGCTGCGGTTGGCCGAACCCGAGCAGTTCGACCTCGACCGGGGCTTTTGGAT
CATCCCGCCGGAGGTCGTCAAGCAACTCCAGGACGAAATGCGCAAGGCCGGCAAGCGGCCGCAGGACGTGCCGCCCTACA
TCGTGCCCCTGTCCCTGCAGGCCATCGAGATCGTGCGCTATCTCCTGGGCGTGATGCGGCCGGCGCAGAAGTACCTGCTG
TCGCACCGCAGCGAACTCAAGAAACGCATCAGCGAGAACACCCTCAACAAGGCCGTGCAGCTCATGGGCTACGAGGGGCG
CCTGACCGGGCACGGCATCCGCGGCACCATCTCGACGGCACTCAACGAGATCGGCTACCCGAAGATTTGGGTGGACGCGC
AGCTTTCGCACTCCGACCCCAACAAGGTGAGTTCGGCCTACAACCACGCCAAGTACGTGGAGCCGCGTCGCCGCATGATG
CAGGACTGGGCCGATCGCCTGGACCTGCTCGAACAGGGCGAAGTGCAAGCTGCGAGCGCGCACCTGACCATCCGTATCGA
CGGGGTGCCAGCGATGGCGGAAGTGGAGGAAGCGGTGGACGTGGCCCCGACGGTCGCCGAGCCCGGTGTCTCCGGCTCAC
CGCCCGTGGCGGCCACGCCCATCGTCGTGACCCCCAACAGCGGCGGAATCACGTTCCAGCGCCTGTCGCAGGTGCCGCCG
CCTCCGGCGCATGCTCCTGAGTCGGAGGTCTCTGCCATCCAGCGCGAGCGTGAGGAAATGCTGGCCATGTACGAGTCGCC
GAACAATCTGCCGGTCGCGCTGTTCGGGAAGCTGGCTGGGAAGTCCAAAGACCAGATCAACCGCGAGCTGAAGGCAGGCA
AGCTACTGTCCATCAGCTTGGGCAACCGGGGGCAGCGCGTTCCCGACTGGCAACTGGTGCCGCTCAAGCGCCGGCTGGCC
CAAGCGCTCATGAACCAATGCCCGCATGTAGATTCTTGGGCGCTGTATCGTCTGTTGACCAAGCCCCATTCCAACCTCGG
AAACCGTGCAGCCATCGATGTCGTCACACCGACCAACGTGGGCAAAGTATTGCAAGCCGTCACGCCCTATAAGGAGTTCG
AGCGCTCCAGTACAGACGAGACACCCCAGTTCTCCGAGTTCGTTCGCCAGTTGCAACGCCACGTGAATGCGCTCGAAGAA
GCGCCGTGCTGA

Upstream 100 bases:

>100_bases
AGGCACAGGAATACGGGTGAGGCGGCTTCCGGATAGTTGCTGGGGCTGAGCGGGAACCATGACGAGCATAGGGCCTAAGT
CATTACTTAGGAGCCTCGAA

Downstream 100 bases:

>100_bases
CGAGCCAGGACTTCGACGCCAACGGCGTGCCGCAACGCGTGTTTACCTAGACGCTAGGAGTGCGTTAAATCCCGTCGTGG
GCGGCTATTGCAACGAACTG

Product: putative phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 643; Mature: 642

Protein sequence:

>643_residues
MALSDLIVRQAKTTGKRYTLYDNDCLSLMVSAAGGKSWMFRYSWLGKQKRMALGGYPALSLREARAERDKAQALIARGID
PQIERDQRRHAAKLAGEYTFKNVFDAWVEHRRKELKEGRQSTLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEK
RKAFTTAEKVRTWFNQMFRYALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRL
LFLTGVRTGELRLAEPEQFDLDRGFWIIPPEVVKQLQDEMRKAGKRPQDVPPYIVPLSLQAIEIVRYLLGVMRPAQKYLL
SHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTALNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMM
QDWADRLDLLEQGEVQAASAHLTIRIDGVPAMAEVEEAVDVAPTVAEPGVSGSPPVAATPIVVTPNSGGITFQRLSQVPP
PPAHAPESEVSAIQREREEMLAMYESPNNLPVALFGKLAGKSKDQINRELKAGKLLSISLGNRGQRVPDWQLVPLKRRLA
QALMNQCPHVDSWALYRLLTKPHSNLGNRAAIDVVTPTNVGKVLQAVTPYKEFERSSTDETPQFSEFVRQLQRHVNALEE
APC

Sequences:

>Translated_643_residues
MALSDLIVRQAKTTGKRYTLYDNDCLSLMVSAAGGKSWMFRYSWLGKQKRMALGGYPALSLREARAERDKAQALIARGID
PQIERDQRRHAAKLAGEYTFKNVFDAWVEHRRKELKEGRQSTLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEK
RKAFTTAEKVRTWFNQMFRYALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRL
LFLTGVRTGELRLAEPEQFDLDRGFWIIPPEVVKQLQDEMRKAGKRPQDVPPYIVPLSLQAIEIVRYLLGVMRPAQKYLL
SHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTALNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMM
QDWADRLDLLEQGEVQAASAHLTIRIDGVPAMAEVEEAVDVAPTVAEPGVSGSPPVAATPIVVTPNSGGITFQRLSQVPP
PPAHAPESEVSAIQREREEMLAMYESPNNLPVALFGKLAGKSKDQINRELKAGKLLSISLGNRGQRVPDWQLVPLKRRLA
QALMNQCPHVDSWALYRLLTKPHSNLGNRAAIDVVTPTNVGKVLQAVTPYKEFERSSTDETPQFSEFVRQLQRHVNALEE
APC
>Mature_642_residues
ALSDLIVRQAKTTGKRYTLYDNDCLSLMVSAAGGKSWMFRYSWLGKQKRMALGGYPALSLREARAERDKAQALIARGIDP
QIERDQRRHAAKLAGEYTFKNVFDAWVEHRRKELKEGRQSTLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKR
KAFTTAEKVRTWFNQMFRYALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRLL
FLTGVRTGELRLAEPEQFDLDRGFWIIPPEVVKQLQDEMRKAGKRPQDVPPYIVPLSLQAIEIVRYLLGVMRPAQKYLLS
HRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTALNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQ
DWADRLDLLEQGEVQAASAHLTIRIDGVPAMAEVEEAVDVAPTVAEPGVSGSPPVAATPIVVTPNSGGITFQRLSQVPPP
PAHAPESEVSAIQREREEMLAMYESPNNLPVALFGKLAGKSKDQINRELKAGKLLSISLGNRGQRVPDWQLVPLKRRLAQ
ALMNQCPHVDSWALYRLLTKPHSNLGNRAAIDVVTPTNVGKVLQAVTPYKEFERSSTDETPQFSEFVRQLQRHVNALEEA
PC

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=415, Percent_Identity=35.1807228915663, Blast_Score=198, Evalue=8e-52,
Organism=Escherichia coli, GI1788690, Length=402, Percent_Identity=31.8407960199005, Blast_Score=194, Evalue=2e-50,
Organism=Escherichia coli, GI1788974, Length=436, Percent_Identity=29.8165137614679, Blast_Score=177, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 72427; Mature: 72296

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSDLIVRQAKTTGKRYTLYDNDCLSLMVSAAGGKSWMFRYSWLGKQKRMALGGYPALS
CCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEHHHHCCHHHHHCCCCCCHH
LREARAERDKAQALIARGIDPQIERDQRRHAAKLAGEYTFKNVFDAWVEHRRKELKEGRQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY
HHHHHHHHHHCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRL
HHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCEEE
LFLTGVRTGELRLAEPEQFDLDRGFWIIPPEVVKQLQDEMRKAGKRPQDVPPYIVPLSLQ
EEEECCCCCCEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEECHHH
AIEIVRYLLGVMRPAQKYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGEVQAASA
HHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEE
HLTIRIDGVPAMAEVEEAVDVAPTVAEPGVSGSPPVAATPIVVTPNSGGITFQRLSQVPP
EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCC
PPAHAPESEVSAIQREREEMLAMYESPNNLPVALFGKLAGKSKDQINRELKAGKLLSISL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCEEEEEE
GNRGQRVPDWQLVPLKRRLAQALMNQCPHVDSWALYRLLTKPHSNLGNRAAIDVVTPTNV
CCCCCCCCCCEECHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCH
GKVLQAVTPYKEFERSSTDETPQFSEFVRQLQRHVNALEEAPC
HHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALSDLIVRQAKTTGKRYTLYDNDCLSLMVSAAGGKSWMFRYSWLGKQKRMALGGYPALS
CHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEHHHHCCHHHHHCCCCCCHH
LREARAERDKAQALIARGIDPQIERDQRRHAAKLAGEYTFKNVFDAWVEHRRKELKEGRQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STLSQILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRY
HHHHHHHHHHCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRL
HHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCEEE
LFLTGVRTGELRLAEPEQFDLDRGFWIIPPEVVKQLQDEMRKAGKRPQDVPPYIVPLSLQ
EEEECCCCCCEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEECHHH
AIEIVRYLLGVMRPAQKYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGEVQAASA
HHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEE
HLTIRIDGVPAMAEVEEAVDVAPTVAEPGVSGSPPVAATPIVVTPNSGGITFQRLSQVPP
EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCC
PPAHAPESEVSAIQREREEMLAMYESPNNLPVALFGKLAGKSKDQINRELKAGKLLSISL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCEEEEEE
GNRGQRVPDWQLVPLKRRLAQALMNQCPHVDSWALYRLLTKPHSNLGNRAAIDVVTPTNV
CCCCCCCCCCEECHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCH
GKVLQAVTPYKEFERSSTDETPQFSEFVRQLQRHVNALEEAPC
HHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]